RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 TPH2Q8IWU9 490 aa9.23□□□□□ -0.93
GINS3-204ENST00000561952 DIS3L2Q8IYB7 885 aaKnown RBP9.23□□□□□ -0.93
GINS3-204ENST00000561952 FAM177A1Q8N128 213 aaPredicted RBP9.23□□□□□ -0.93
GINS3-204ENST00000561952 LRRC43Q8N309 656 aa9.23□□□□□ -0.93
GINS3-204ENST00000561952 SLC7A3Q8WY07 619 aa9.23□□□□□ -0.93
GINS3-204ENST00000561952 FAM20AQ96MK3 541 aa9.23□□□□□ -0.93
GINS3-204ENST00000561952 CCDC43Q96MW1 224 aaKnown RBP9.23□□□□□ -0.93
GINS3-204ENST00000561952 CEP89Q96ST8 783 aa9.23□□□□□ -0.93
GINS3-204ENST00000561952 APOL5Q9BWW9 433 aa9.23□□□□□ -0.93
GINS3-204ENST00000561952 TMEM117Q9H0C3 514 aa9.23□□□□□ -0.93
GINS3-204ENST00000561952 GBP3Q9H0R5 595 aa9.23□□□□□ -0.93
GINS3-204ENST00000561952 TLE6Q9H808 572 aa9.23□□□□□ -0.93
GINS3-204ENST00000561952 TLR9Q9NR96 1032 aa9.23□□□□□ -0.93
GINS3-204ENST00000561952 CD207Q9UJ71 328 aa9.23□□□□□ -0.93
GINS3-204ENST00000561952 COL4A3BPQ9Y5P4 624 aa9.23□□□□□ -0.93
GINS3-204ENST00000561952 IGKV6-21A0A0C4DH24 114 aa9.22□□□□□ -0.93
GINS3-204ENST00000561952 MEIS3P2A8K0S8 358 aa9.22□□□□□ -0.93
GINS3-204ENST00000561952 HOXA2O43364 376 aa9.22□□□□□ -0.93
GINS3-204ENST00000561952 MBTPS2O43462 519 aa9.22□□□□□ -0.93
GINS3-204ENST00000561952 NCK2O43639 380 aa9.22□□□□□ -0.93
GINS3-204ENST00000561952 NEMFO60524 1076 aa9.22□□□□□ -0.93
GINS3-204ENST00000561952 DKC1O60832 514 aaKnown RBP eCLIP9.22□□□□□ -0.93
GINS3-204ENST00000561952 ZC3H11AO75152 810 aaKnown RBP eCLIP9.22□□□□□ -0.93
GINS3-204ENST00000561952 ATF7P17544 494 aaPredicted RBP9.22□□□□□ -0.93
GINS3-204ENST00000561952 TXKP42681 527 aa9.22□□□□□ -0.93
GINS3-204ENST00000561952 FAM189BP81408 668 aa9.22□□□□□ -0.93
GINS3-204ENST00000561952 EMC2Q15006 297 aa9.22□□□□□ -0.93
GINS3-204ENST00000561952 EPHA7Q15375 998 aa9.22□□□□□ -0.93
GINS3-204ENST00000561952 CTC1Q2NKJ3 1217 aa9.22□□□□□ -0.93
GINS3-204ENST00000561952 PUS10Q3MIT2 529 aaKnown RBP9.22□□□□□ -0.93
GINS3-204ENST00000561952 KCNT2Q6UVM3 1135 aa9.22□□□□□ -0.93
GINS3-204ENST00000561952 TNFRSF25Q93038 417 aa9.22□□□□□ -0.93
GINS3-204ENST00000561952 ZNF558Q96NG5 402 aa9.22□□□□□ -0.93
GINS3-204ENST00000561952 NAP1L4Q99733 375 aaKnown RBP9.22□□□□□ -0.93
GINS3-204ENST00000561952 TCF25Q9BQ70 676 aa9.22□□□□□ -0.93
GINS3-204ENST00000561952 C1QTNF1Q9BXJ1 281 aa9.22□□□□□ -0.93
GINS3-204ENST00000561952 ELAC1Q9H777 363 aaKnown RBP9.22□□□□□ -0.93
GINS3-204ENST00000561952 DACT1Q9NYF0 836 aa9.22□□□□□ -0.93
GINS3-204ENST00000561952 FAM50BQ9Y247 325 aa9.22□□□□□ -0.93
GINS3-204ENST00000561952 A0A0U1RQF3 1178 aa9.21□□□□□ -0.94
GINS3-204ENST00000561952 TBX3O15119 743 aa9.21□□□□□ -0.94
GINS3-204ENST00000561952 GLP2RO95838 553 aa9.21□□□□□ -0.94
GINS3-204ENST00000561952 SP100P23497 879 aaPredicted RBP9.21□□□□□ -0.94
GINS3-204ENST00000561952 MCM7P33993 719 aa9.21□□□□□ -0.94
GINS3-204ENST00000561952 PHKA2P46019 1235 aa9.21□□□□□ -0.94
GINS3-204ENST00000561952 ZP2Q05996 745 aa9.21□□□□□ -0.94
GINS3-204ENST00000561952 SPIRE1Q08AE8 756 aa9.21□□□□□ -0.94
GINS3-204ENST00000561952 ADAM15Q13444 863 aa9.21□□□□□ -0.94
GINS3-204ENST00000561952 SMAD4Q13485 552 aaKnown RBP9.21□□□□□ -0.94
GINS3-204ENST00000561952 COL19A1Q14993 1142 aa9.21□□□□□ -0.94
GINS3-204ENST00000561952 TMEM31Q5JXX7 168 aa9.21□□□□□ -0.94
GINS3-204ENST00000561952 VARS2Q5ST30 1063 aaKnown RBP9.21□□□□□ -0.94
GINS3-204ENST00000561952 MAEAQ7L5Y9 396 aa9.21□□□□□ -0.94
GINS3-204ENST00000561952 ZNF410Q86VK4 478 aa9.21□□□□□ -0.94
GINS3-204ENST00000561952 SLFN12Q8IYM2 578 aa9.21□□□□□ -0.94
GINS3-204ENST00000561952 EFHBQ8N7U6 833 aa9.21□□□□□ -0.94
GINS3-204ENST00000561952 RNF149Q8NC42 400 aa9.21□□□□□ -0.94
GINS3-204ENST00000561952 VN1R2Q8NFZ6 395 aa9.21□□□□□ -0.94
GINS3-204ENST00000561952 PRPF31Q8WWY3 499 aaKnown RBP9.21□□□□□ -0.94
GINS3-204ENST00000561952 PSPC1Q8WXF1 523 aaKnown RBP9.21□□□□□ -0.94
GINS3-204ENST00000561952 MRPS27Q92552 414 aaKnown RBP9.21□□□□□ -0.94
GINS3-204ENST00000561952 MTRQ99707 1265 aa9.21□□□□□ -0.94
GINS3-204ENST00000561952 EIF2AK1Q9BQI3 630 aaKnown RBP9.21□□□□□ -0.94
GINS3-204ENST00000561952 JPH2Q9BR39 696 aaPredicted RBP9.21□□□□□ -0.94
GINS3-204ENST00000561952 LRFN3Q9BTN0 628 aa9.21□□□□□ -0.94
GINS3-204ENST00000561952 ZSWIM4Q9H7M6 989 aa9.21□□□□□ -0.94
GINS3-204ENST00000561952 TTC12Q9H892 705 aaPredicted RBP9.21□□□□□ -0.94
GINS3-204ENST00000561952 MINDY3Q9H8M7 445 aa9.21□□□□□ -0.94
GINS3-204ENST00000561952 FAM105AQ9NUU6 356 aa9.21□□□□□ -0.94
GINS3-204ENST00000561952 CLEC1BQ9P126 229 aa9.21□□□□□ -0.94
GINS3-204ENST00000561952 TDRD15B5MCY1 1934 aaKnown RBP9.21□□□□□ -0.94
GINS3-204ENST00000561952 HIDE1A8MVS5 230 aa9.2□□□□□ -0.94
GINS3-204ENST00000561952 USO1O60763 962 aaKnown RBP9.2□□□□□ -0.94
GINS3-204ENST00000561952 RFC5P40937 340 aa9.2□□□□□ -0.94
GINS3-204ENST00000561952 BCAR1P56945 870 aa9.2□□□□□ -0.94
GINS3-204ENST00000561952 UBE3AQ05086 875 aa9.2□□□□□ -0.94
GINS3-204ENST00000561952 RNASELQ05823 741 aaKnown RBP9.2□□□□□ -0.94
GINS3-204ENST00000561952 LAMTOR4Q0VGL1 99 aa9.2□□□□□ -0.94
GINS3-204ENST00000561952 GNL2Q13823 731 aaKnown RBP9.2□□□□□ -0.94
GINS3-204ENST00000561952 SAFBQ15424 915 aaKnown RBP eCLIP9.2□□□□□ -0.94
GINS3-204ENST00000561952 SMAD2Q15796 467 aaKnown RBP9.2□□□□□ -0.94
GINS3-204ENST00000561952 CSPP1Q1MSJ5 1256 aa9.2□□□□□ -0.94
GINS3-204ENST00000561952 OTUD6AQ7L8S5 288 aa9.2□□□□□ -0.94
GINS3-204ENST00000561952 TMC7Q7Z402 723 aa9.2□□□□□ -0.94
GINS3-204ENST00000561952 ZNF598Q86UK7 904 aaKnown RBP9.2□□□□□ -0.94
GINS3-204ENST00000561952 TMEM173Q86WV6 379 aaPredicted RBP9.2□□□□□ -0.94
GINS3-204ENST00000561952 ADHFE1Q8IWW8 467 aa9.2□□□□□ -0.94
GINS3-204ENST00000561952 C4orf19Q8IY42 314 aa9.2□□□□□ -0.94
GINS3-204ENST00000561952 PIGOQ8TEQ8 1089 aa9.2□□□□□ -0.94
GINS3-204ENST00000561952 AUTS2Q8WXX7 1259 aa9.2□□□□□ -0.94
GINS3-204ENST00000561952 CPB2Q96IY4 423 aa9.2□□□□□ -0.94
GINS3-204ENST00000561952 C8orf76Q96K31 380 aa9.2□□□□□ -0.94
GINS3-204ENST00000561952 MSLNLQ96KJ4 702 aa9.2□□□□□ -0.94
GINS3-204ENST00000561952 APOL6Q9BWW8 343 aa9.2□□□□□ -0.94
GINS3-204ENST00000561952 INO80BQ9C086 356 aaPredicted RBP9.2□□□□□ -0.94
GINS3-204ENST00000561952 TMEM60Q9H2L4 133 aa9.2□□□□□ -0.94
GINS3-204ENST00000561952 DHX33Q9H6R0 707 aaKnown RBP9.2□□□□□ -0.94
GINS3-204ENST00000561952 IFT122Q9HBG6 1241 aa9.2□□□□□ -0.94
GINS3-204ENST00000561952 C11orf16Q9NQ32 467 aa9.2□□□□□ -0.94
GINS3-204ENST00000561952 AGPAT5Q9NUQ2 364 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms