RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 KANK3Q6NY19 840 aa18.07■□□□□ 0.48
USB1-204ENST00000561568 CNNM4Q6P4Q7 775 aa18.07■□□□□ 0.48
USB1-204ENST00000561568 CATSPER4Q7RTX7 472 aa18.07■□□□□ 0.48
USB1-204ENST00000561568 MYCT1Q8N699 235 aa18.07■□□□□ 0.48
USB1-204ENST00000561568 BSNDQ8WZ55 320 aa18.07■□□□□ 0.48
USB1-204ENST00000561568 C7orf25Q9BPX7 421 aa18.07■□□□□ 0.48
USB1-204ENST00000561568 ZHX3Q9H4I2 956 aa18.07■□□□□ 0.48
USB1-204ENST00000561568 PARVGQ9HBI0 331 aa18.07■□□□□ 0.48
USB1-204ENST00000561568 KMT5AQ9NQR1 393 aa18.07■□□□□ 0.48
USB1-204ENST00000561568 RNF216Q9NWF9 866 aaPredicted RBP18.07■□□□□ 0.48
USB1-204ENST00000561568 K7ERI5 159 aa18.06■□□□□ 0.48
USB1-204ENST00000561568 PRPF40AO75400 957 aaKnown RBP18.06■□□□□ 0.48
USB1-204ENST00000561568 MYL1P05976 194 aa18.06■□□□□ 0.48
USB1-204ENST00000561568 AXLP30530 894 aa18.06■□□□□ 0.48
USB1-204ENST00000561568 ABCD1P33897 745 aa18.06■□□□□ 0.48
USB1-204ENST00000561568 UBE2HP62256 183 aa18.06■□□□□ 0.48
USB1-204ENST00000561568 C9orf50Q5SZB4 431 aa18.06■□□□□ 0.48
USB1-204ENST00000561568 RASIP1Q5U651 963 aa18.06■□□□□ 0.48
USB1-204ENST00000561568 CDCA2Q69YH5 1023 aaPredicted RBP18.06■□□□□ 0.48
USB1-204ENST00000561568 SLC17A8Q8NDX2 589 aa18.06■□□□□ 0.48
USB1-204ENST00000561568 CNNM3Q8NE01 707 aa18.06■□□□□ 0.48
USB1-204ENST00000561568 PHOSPHO2Q8TCD6 241 aa18.06■□□□□ 0.48
USB1-204ENST00000561568 STAMQ92783 540 aa18.06■□□□□ 0.48
USB1-204ENST00000561568 DNAJC19Q96DA6 116 aa18.06■□□□□ 0.48
USB1-204ENST00000561568 PAGE5Q96GU1 130 aa18.06■□□□□ 0.48
USB1-204ENST00000561568 RNPC3Q96LT9 517 aaKnown RBP18.06■□□□□ 0.48
USB1-204ENST00000561568 GOLPH3LQ9H4A5 285 aa18.06■□□□□ 0.48
USB1-204ENST00000561568 TMEM134Q9H6X4 195 aa18.06■□□□□ 0.48
USB1-204ENST00000561568 MINDY3Q9H8M7 445 aa18.06■□□□□ 0.48
USB1-204ENST00000561568 PRMT7Q9NVM4 692 aaPredicted RBP18.06■□□□□ 0.48
USB1-204ENST00000561568 SEL1LQ9UBV2 794 aa18.06■□□□□ 0.48
USB1-204ENST00000561568 COLQQ9Y215 455 aaPredicted RBP18.06■□□□□ 0.48
USB1-204ENST00000561568 SLC4A7Q9Y6M7 1214 aa18.06■□□□□ 0.48
USB1-204ENST00000561568 SCN5AQ14524 2016 aa18.05■□□□□ 0.48
USB1-204ENST00000561568 DENND3A2RUS2 1198 aa18.05■□□□□ 0.48
USB1-204ENST00000561568 ZBBXA8MT70 800 aa18.05■□□□□ 0.48
USB1-204ENST00000561568 ACTN4O43707 911 aaKnown RBP18.05■□□□□ 0.48
USB1-204ENST00000561568 TRAK2O60296 914 aa18.05■□□□□ 0.48
USB1-204ENST00000561568 ERLIN2O94905 339 aa18.05■□□□□ 0.48
USB1-204ENST00000561568 GAP43P17677 238 aa18.05■□□□□ 0.48
USB1-204ENST00000561568 AFMP43652 599 aa18.05■□□□□ 0.48
USB1-204ENST00000561568 KCNJ6P48051 423 aa18.05■□□□□ 0.48
USB1-204ENST00000561568 CACNB1Q02641 598 aaPredicted RBP18.05■□□□□ 0.48
USB1-204ENST00000561568 FAM160A1Q05DH4 1040 aa18.05■□□□□ 0.48
USB1-204ENST00000561568 MAPK6Q16659 721 aa18.05■□□□□ 0.48
USB1-204ENST00000561568 FAM187BQ17R55 369 aa18.05■□□□□ 0.48
USB1-204ENST00000561568 KRBA2Q6ZNG9 492 aa18.05■□□□□ 0.48
USB1-204ENST00000561568 CCDC65Q8IXS2 484 aa18.05■□□□□ 0.48
USB1-204ENST00000561568 FMR1NBQ8N0W7 255 aaPredicted RBP18.05■□□□□ 0.48
USB1-204ENST00000561568 PRIMPOLQ96LW4 560 aa18.05■□□□□ 0.48
USB1-204ENST00000561568 TRIM9Q9C026 710 aa18.05■□□□□ 0.48
USB1-204ENST00000561568 TMX1Q9H3N1 280 aa18.05■□□□□ 0.48
USB1-204ENST00000561568 FZD8Q9H461 694 aa18.05■□□□□ 0.48
USB1-204ENST00000561568 RGS18Q9NS28 235 aa18.05■□□□□ 0.48
USB1-204ENST00000561568 DACT1Q9NYF0 836 aa18.05■□□□□ 0.48
USB1-204ENST00000561568 TANC1Q9C0D5 1861 aa18.04■□□□□ 0.48
USB1-204ENST00000561568 GOLGA6L22H0YM25 854 aa18.04■□□□□ 0.48
USB1-204ENST00000561568 AMHP03971 560 aa18.04■□□□□ 0.48
USB1-204ENST00000561568 MAPTP10636 758 aaKnown RBP18.04■□□□□ 0.48
USB1-204ENST00000561568 IDEP14735 1019 aa18.04■□□□□ 0.48
USB1-204ENST00000561568 FGFR4P22455 802 aa18.04■□□□□ 0.48
USB1-204ENST00000561568 MBTD1Q05BQ5 628 aa18.04■□□□□ 0.48
USB1-204ENST00000561568 TCTN1Q2MV58 587 aa18.04■□□□□ 0.48
USB1-204ENST00000561568 SLC24A5Q71RS6 500 aa18.04■□□□□ 0.48
USB1-204ENST00000561568 RTN4RL1Q86UN2 441 aaPredicted RBP18.04■□□□□ 0.48
USB1-204ENST00000561568 ENGASEQ8NFI3 743 aa18.04■□□□□ 0.48
USB1-204ENST00000561568 TIGD1Q96MW7 591 aa18.04■□□□□ 0.48
USB1-204ENST00000561568 ADAM2Q99965 735 aa18.04■□□□□ 0.48
USB1-204ENST00000561568 TSPYL2Q9H2G4 693 aaPredicted RBP18.04■□□□□ 0.48
USB1-204ENST00000561568 C1orf112Q9NSG2 853 aa18.04■□□□□ 0.48
USB1-204ENST00000561568 PANK4Q9NVE7 773 aa18.04■□□□□ 0.48
USB1-204ENST00000561568 CEP290O15078 2479 aa18.03■□□□□ 0.48
USB1-204ENST00000561568 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.03■□□□□ 0.48
USB1-204ENST00000561568 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.03■□□□□ 0.48
USB1-204ENST00000561568 PVALEFA0A1B0GWK0 134 aa18.03■□□□□ 0.48
USB1-204ENST00000561568 ACKR2O00590 384 aa18.03■□□□□ 0.48
USB1-204ENST00000561568 SLC16A4O15374 487 aa18.03■□□□□ 0.48
USB1-204ENST00000561568 GADD45BO75293 160 aaPredicted RBP18.03■□□□□ 0.48
USB1-204ENST00000561568 WDR5P61964 334 aaKnown RBP18.03■□□□□ 0.48
USB1-204ENST00000561568 SNW1Q13573 536 aaKnown RBP18.03■□□□□ 0.48
USB1-204ENST00000561568 DSC3Q14574 896 aa18.03■□□□□ 0.48
USB1-204ENST00000561568 HERC4Q5GLZ8 1057 aaPredicted RBP18.03■□□□□ 0.48
USB1-204ENST00000561568 PPP4R3CPQ6ZMV5 832 aa18.03■□□□□ 0.48
USB1-204ENST00000561568 HAUS6Q7Z4H7 955 aa18.03■□□□□ 0.48
USB1-204ENST00000561568 FAM178BQ8IXR5 827 aa18.03■□□□□ 0.48
USB1-204ENST00000561568 KCNN1Q92952 543 aa18.03■□□□□ 0.48
USB1-204ENST00000561568 SLC9A7Q96T83 725 aa18.03■□□□□ 0.48
USB1-204ENST00000561568 AGPAT5Q9NUQ2 364 aa18.03■□□□□ 0.48
USB1-204ENST00000561568 CXXC1Q9P0U4 656 aaPredicted RBP18.03■□□□□ 0.48
USB1-204ENST00000561568 ARHGAP28Q9P2N2 729 aa18.03■□□□□ 0.48
USB1-204ENST00000561568 HOOK1Q9UJC3 728 aaKnown RBP18.03■□□□□ 0.48
USB1-204ENST00000561568 TET1Q8NFU7 2136 aa18.02■□□□□ 0.48
USB1-204ENST00000561568 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.02■□□□□ 0.48
USB1-204ENST00000561568 FRMD3A2A2Y4 597 aa18.02■□□□□ 0.48
USB1-204ENST00000561568 SKIP12755 728 aa18.02■□□□□ 0.48
USB1-204ENST00000561568 HOXA11P31270 313 aaPredicted RBP18.02■□□□□ 0.48
USB1-204ENST00000561568 NCKAP1LP55160 1127 aa18.02■□□□□ 0.48
USB1-204ENST00000561568 ASIC1P78348 528 aa18.02■□□□□ 0.48
USB1-204ENST00000561568 FAM189BP81408 668 aa18.02■□□□□ 0.48
USB1-204ENST00000561568 STRN3Q13033 797 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms