RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 NFKBIZQ9BYH8 718 aa17.2■□□□□ 0.34
CCDC113-203ENST00000561517 POLR3FQ9H1D9 316 aaPredicted RBP17.2■□□□□ 0.34
CCDC113-203ENST00000561517 FAM105AQ9NUU6 356 aa17.2■□□□□ 0.34
CCDC113-203ENST00000561517 TYW1Q9NV66 732 aaKnown RBP17.2■□□□□ 0.34
CCDC113-203ENST00000561517 HCSTQ9UBK5 93 aa17.2■□□□□ 0.34
CCDC113-203ENST00000561517 MYH11P35749 1972 aa17.2■□□□□ 0.34
CCDC113-203ENST00000561517 CAMK1Q14012 370 aa17.19■□□□□ 0.34
CCDC113-203ENST00000561517 DTHD1Q6ZMT9 781 aa17.19■□□□□ 0.34
CCDC113-203ENST00000561517 LRRC55Q6ZSA7 311 aa17.19■□□□□ 0.34
CCDC113-203ENST00000561517 BRAPQ7Z569 592 aa17.19■□□□□ 0.34
CCDC113-203ENST00000561517 ABI1Q8IZP0 508 aa17.19■□□□□ 0.34
CCDC113-203ENST00000561517 SPPL3Q8TCT6 385 aa17.19■□□□□ 0.34
CCDC113-203ENST00000561517 SNX29Q8TEQ0 813 aa17.19■□□□□ 0.34
CCDC113-203ENST00000561517 RSPH1Q8WYR4 309 aa17.19■□□□□ 0.34
CCDC113-203ENST00000561517 HLA-CQ95604 372 aa17.19■□□□□ 0.34
CCDC113-203ENST00000561517 INTS4Q96HW7 963 aaKnown RBP17.19■□□□□ 0.34
CCDC113-203ENST00000561517 NSUN3Q9H649 340 aaKnown RBP17.19■□□□□ 0.34
CCDC113-203ENST00000561517 ALG13Q9NP73 1137 aaKnown RBP17.19■□□□□ 0.34
CCDC113-203ENST00000561517 AAASQ9NRG9 546 aa17.19■□□□□ 0.34
CCDC113-203ENST00000561517 PCDHB12Q9Y5F1 795 aa17.19■□□□□ 0.34
CCDC113-203ENST00000561517 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.18■□□□□ 0.34
CCDC113-203ENST00000561517 ARHGEF35A5YM69 484 aa17.18■□□□□ 0.34
CCDC113-203ENST00000561517 LAG3P18627 525 aa17.18■□□□□ 0.34
CCDC113-203ENST00000561517 CYP11B2P19099 503 aa17.18■□□□□ 0.34
CCDC113-203ENST00000561517 PDCP20941 246 aa17.18■□□□□ 0.34
CCDC113-203ENST00000561517 AXLP30530 894 aa17.18■□□□□ 0.34
CCDC113-203ENST00000561517 TFF2Q03403 129 aa17.18■□□□□ 0.34
CCDC113-203ENST00000561517 MBTD1Q05BQ5 628 aa17.18■□□□□ 0.34
CCDC113-203ENST00000561517 CSPP1Q1MSJ5 1256 aa17.18■□□□□ 0.34
CCDC113-203ENST00000561517 AAK1Q2M2I8 961 aa17.18■□□□□ 0.34
CCDC113-203ENST00000561517 TCEAL5Q5H9L2 206 aa17.18■□□□□ 0.34
CCDC113-203ENST00000561517 SPOUT1Q5T280 376 aaKnown RBP17.18■□□□□ 0.34
CCDC113-203ENST00000561517 ARL6IP4Q66PJ3 421 aaKnown RBP17.18■□□□□ 0.34
CCDC113-203ENST00000561517 PADI6Q6TGC4 694 aa17.18■□□□□ 0.34
CCDC113-203ENST00000561517 LRRC43Q8N309 656 aa17.18■□□□□ 0.34
CCDC113-203ENST00000561517 COLGALT1Q8NBJ5 622 aa17.18■□□□□ 0.34
CCDC113-203ENST00000561517 RNF169Q8NCN4 708 aa17.18■□□□□ 0.34
CCDC113-203ENST00000561517 SYMPKQ92797 1274 aaKnown RBP17.18■□□□□ 0.34
CCDC113-203ENST00000561517 MMTAG2Q9BU76 263 aaKnown RBP17.18■□□□□ 0.34
CCDC113-203ENST00000561517 GPRC5CQ9NQ84 441 aa17.18■□□□□ 0.34
CCDC113-203ENST00000561517 KIAA1024Q9UPX6 916 aa17.18■□□□□ 0.34
CCDC113-203ENST00000561517 PP2D1A8MPX8 630 aa17.17■□□□□ 0.34
CCDC113-203ENST00000561517 K7ELQ4 463 aaPredicted RBP17.17■□□□□ 0.34
CCDC113-203ENST00000561517 TSPAN1O60635 241 aa17.17■□□□□ 0.34
CCDC113-203ENST00000561517 ERLIN2O94905 339 aa17.17■□□□□ 0.34
CCDC113-203ENST00000561517 DNAJB1P25685 340 aa17.17■□□□□ 0.34
CCDC113-203ENST00000561517 COL19A1Q14993 1142 aa17.17■□□□□ 0.34
CCDC113-203ENST00000561517 AMHR2Q16671 573 aa17.17■□□□□ 0.34
CCDC113-203ENST00000561517 UBXN11Q5T124 520 aa17.17■□□□□ 0.34
CCDC113-203ENST00000561517 KRT79Q5XKE5 535 aa17.17■□□□□ 0.34
CCDC113-203ENST00000561517 MAEAQ7L5Y9 396 aa17.17■□□□□ 0.34
CCDC113-203ENST00000561517 MRPL10Q7Z7H8 261 aaKnown RBP17.17■□□□□ 0.34
CCDC113-203ENST00000561517 HELQQ8TDG4 1101 aa17.17■□□□□ 0.34
CCDC113-203ENST00000561517 BHMT2Q9H2M3 363 aa17.17■□□□□ 0.34
CCDC113-203ENST00000561517 DDX19AQ9NUU7 478 aaKnown RBP17.17■□□□□ 0.34
CCDC113-203ENST00000561517 PCDHB2Q9Y5E7 798 aa17.17■□□□□ 0.34
CCDC113-203ENST00000561517 TDRD15B5MCY1 1934 aaKnown RBP17.16■□□□□ 0.34
CCDC113-203ENST00000561517 INO80B-WBP1J3KQ70 363 aa17.16■□□□□ 0.34
CCDC113-203ENST00000561517 CDC25AP30304 524 aa17.16■□□□□ 0.34
CCDC113-203ENST00000561517 UBE3AQ05086 875 aa17.16■□□□□ 0.34
CCDC113-203ENST00000561517 HYIQ5T013 277 aa17.16■□□□□ 0.34
CCDC113-203ENST00000561517 CDCA2Q69YH5 1023 aaPredicted RBP17.16■□□□□ 0.34
CCDC113-203ENST00000561517 POF1BQ8WVV4 589 aa17.16■□□□□ 0.34
CCDC113-203ENST00000561517 LPPQ93052 612 aa17.16■□□□□ 0.34
CCDC113-203ENST00000561517 SNX21Q969T3 373 aa17.16■□□□□ 0.34
CCDC113-203ENST00000561517 PGBD4Q96DM1 585 aa17.16■□□□□ 0.34
CCDC113-203ENST00000561517 CCDC51Q96ER9 411 aa17.16■□□□□ 0.34
CCDC113-203ENST00000561517 MRPL9Q9BYD2 267 aaKnown RBP17.16■□□□□ 0.34
CCDC113-203ENST00000561517 UBE2ZQ9H832 354 aaPredicted RBP17.16■□□□□ 0.34
CCDC113-203ENST00000561517 VPS37CA5D8V6 355 aaPredicted RBP17.15■□□□□ 0.34
CCDC113-203ENST00000561517 MEIS3P2A8K0S8 358 aa17.15■□□□□ 0.34
CCDC113-203ENST00000561517 FGF18O76093 207 aa17.15■□□□□ 0.34
CCDC113-203ENST00000561517 EYA4O95677 639 aa17.15■□□□□ 0.34
CCDC113-203ENST00000561517 BMP15O95972 392 aa17.15■□□□□ 0.34
CCDC113-203ENST00000561517 BMP1P13497 986 aa17.15■□□□□ 0.34
CCDC113-203ENST00000561517 SYT1P21579 422 aa17.15■□□□□ 0.34
CCDC113-203ENST00000561517 PLCB3Q01970 1234 aa17.15■□□□□ 0.34
CCDC113-203ENST00000561517 NOTUMQ6P988 496 aa17.15■□□□□ 0.34
CCDC113-203ENST00000561517 KCNT2Q6UVM3 1135 aa17.15■□□□□ 0.34
CCDC113-203ENST00000561517 AGMOQ6ZNB7 445 aa17.15■□□□□ 0.34
CCDC113-203ENST00000561517 THNSL1Q8IYQ7 743 aa17.15■□□□□ 0.34
CCDC113-203ENST00000561517 KCTD17Q8N5Z5 321 aa17.15■□□□□ 0.34
CCDC113-203ENST00000561517 BSNDQ8WZ55 320 aa17.15■□□□□ 0.34
CCDC113-203ENST00000561517 DNM3Q9UQ16 869 aa17.15■□□□□ 0.34
CCDC113-203ENST00000561517 VWA3AA6NCI4 1184 aa17.14■□□□□ 0.33
CCDC113-203ENST00000561517 LRRIQ4A6NIV6 560 aa17.14■□□□□ 0.33
CCDC113-203ENST00000561517 E9PMD0 336 aa17.14■□□□□ 0.33
CCDC113-203ENST00000561517 NCK2O43639 380 aa17.14■□□□□ 0.33
CCDC113-203ENST00000561517 OFD1O75665 1012 aa17.14■□□□□ 0.33
CCDC113-203ENST00000561517 ARF4P18085 180 aaPredicted RBP17.14■□□□□ 0.33
CCDC113-203ENST00000561517 NCLP19338 710 aaKnown RBP17.14■□□□□ 0.33
CCDC113-203ENST00000561517 KCNQ1P51787 676 aa17.14■□□□□ 0.33
CCDC113-203ENST00000561517 NCBP1Q09161 790 aaKnown RBP17.14■□□□□ 0.33
CCDC113-203ENST00000561517 FAM187BQ17R55 369 aa17.14■□□□□ 0.33
CCDC113-203ENST00000561517 GLB1LQ6UWU2 654 aa17.14■□□□□ 0.33
CCDC113-203ENST00000561517 PPP4R3CPQ6ZMV5 832 aa17.14■□□□□ 0.33
CCDC113-203ENST00000561517 SMG8Q8ND04 991 aaKnown RBP17.14■□□□□ 0.33
CCDC113-203ENST00000561517 CNNM3Q8NE01 707 aa17.14■□□□□ 0.33
CCDC113-203ENST00000561517 PABPC5Q96DU9 382 aaKnown RBP17.14■□□□□ 0.33
CCDC113-203ENST00000561517 CPB2Q96IY4 423 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms