RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 HAUS3Q68CZ6 603 aa22.97■■□□□ 1.27
TPM1-232ENST00000561425 MCTP1Q6DN14 999 aa22.97■■□□□ 1.27
TPM1-232ENST00000561425 POTEGQ6S5H5 508 aa22.97■■□□□ 1.27
TPM1-232ENST00000561425 AAASQ9NRG9 546 aa22.97■■□□□ 1.27
TPM1-232ENST00000561425 HCSTQ9UBK5 93 aa22.97■■□□□ 1.27
TPM1-232ENST00000561425 H3BQV1 296 aa22.96■■□□□ 1.27
TPM1-232ENST00000561425 CYP11B2P19099 503 aa22.96■■□□□ 1.27
TPM1-232ENST00000561425 IBSPP21815 317 aaPredicted RBP22.96■■□□□ 1.27
TPM1-232ENST00000561425 UBE3AQ05086 875 aa22.96■■□□□ 1.27
TPM1-232ENST00000561425 TFDP1Q14186 410 aa22.96■■□□□ 1.27
TPM1-232ENST00000561425 AMHR2Q16671 573 aa22.96■■□□□ 1.27
TPM1-232ENST00000561425 CSPP1Q1MSJ5 1256 aa22.96■■□□□ 1.27
TPM1-232ENST00000561425 TWF2Q6IBS0 349 aaKnown RBP22.96■■□□□ 1.27
TPM1-232ENST00000561425 COLGALT1Q8NBJ5 622 aa22.96■■□□□ 1.27
TPM1-232ENST00000561425 MCPH1Q8NEM0 835 aa22.96■■□□□ 1.27
TPM1-232ENST00000561425 PCDHB12Q9Y5F1 795 aa22.96■■□□□ 1.27
TPM1-232ENST00000561425 LAG3P18627 525 aa22.95■■□□□ 1.26
TPM1-232ENST00000561425 AXLP30530 894 aa22.95■■□□□ 1.26
TPM1-232ENST00000561425 PLCB3Q01970 1234 aa22.95■■□□□ 1.26
TPM1-232ENST00000561425 MBTD1Q05BQ5 628 aa22.95■■□□□ 1.26
TPM1-232ENST00000561425 CTC1Q2NKJ3 1217 aa22.95■■□□□ 1.26
TPM1-232ENST00000561425 PADI6Q6TGC4 694 aa22.95■■□□□ 1.26
TPM1-232ENST00000561425 LRRC43Q8N309 656 aa22.95■■□□□ 1.26
TPM1-232ENST00000561425 RAB34Q9BZG1 259 aa22.95■■□□□ 1.26
TPM1-232ENST00000561425 UBE2ZQ9H832 354 aaPredicted RBP22.95■■□□□ 1.26
TPM1-232ENST00000561425 VCANP13611 3396 aa22.95■■□□□ 1.26
TPM1-232ENST00000561425 NCK2O43639 380 aa22.94■■□□□ 1.26
TPM1-232ENST00000561425 TSPAN1O60635 241 aa22.94■■□□□ 1.26
TPM1-232ENST00000561425 USO1O60763 962 aaKnown RBP22.94■■□□□ 1.26
TPM1-232ENST00000561425 CCT6AP40227 531 aaKnown RBP22.94■■□□□ 1.26
TPM1-232ENST00000561425 DTHD1Q6ZMT9 781 aa22.94■■□□□ 1.26
TPM1-232ENST00000561425 POF1BQ8WVV4 589 aa22.94■■□□□ 1.26
TPM1-232ENST00000561425 PABPC5Q96DU9 382 aaKnown RBP22.94■■□□□ 1.26
TPM1-232ENST00000561425 CCDC43Q96MW1 224 aaKnown RBP22.94■■□□□ 1.26
TPM1-232ENST00000561425 MMTAG2Q9BU76 263 aaKnown RBP22.94■■□□□ 1.26
TPM1-232ENST00000561425 POLR3FQ9H1D9 316 aaPredicted RBP22.94■■□□□ 1.26
TPM1-232ENST00000561425 GPRC5CQ9NQ84 441 aa22.94■■□□□ 1.26
TPM1-232ENST00000561425 LZTS1Q9Y250 596 aa22.94■■□□□ 1.26
TPM1-232ENST00000561425 PCDHB2Q9Y5E7 798 aa22.94■■□□□ 1.26
TPM1-232ENST00000561425 OFD1O75665 1012 aa22.93■■□□□ 1.26
TPM1-232ENST00000561425 FGF18O76093 207 aa22.93■■□□□ 1.26
TPM1-232ENST00000561425 KCNQ1P51787 676 aa22.93■■□□□ 1.26
TPM1-232ENST00000561425 LEXMQ3ZCV2 418 aa22.93■■□□□ 1.26
TPM1-232ENST00000561425 ARL6IP4Q66PJ3 421 aaKnown RBP22.93■■□□□ 1.26
TPM1-232ENST00000561425 ABI1Q8IZP0 508 aa22.93■■□□□ 1.26
TPM1-232ENST00000561425 HELQQ8TDG4 1101 aa22.93■■□□□ 1.26
TPM1-232ENST00000561425 CCDC51Q96ER9 411 aa22.93■■□□□ 1.26
TPM1-232ENST00000561425 INTS4Q96HW7 963 aaKnown RBP22.93■■□□□ 1.26
TPM1-232ENST00000561425 KIAA1024Q9UPX6 916 aa22.93■■□□□ 1.26
TPM1-232ENST00000561425 KIAA1671Q9BY89 1806 aa22.93■■□□□ 1.26
TPM1-232ENST00000561425 XIRP2A4UGR9 3374 aa22.92■■□□□ 1.26
TPM1-232ENST00000561425 MEIS3P2A8K0S8 358 aa22.92■■□□□ 1.26
TPM1-232ENST00000561425 NCLP19338 710 aaKnown RBP22.92■■□□□ 1.26
TPM1-232ENST00000561425 IRS1P35568 1242 aa22.92■■□□□ 1.26
TPM1-232ENST00000561425 HYAL1Q12794 435 aa22.92■■□□□ 1.26
TPM1-232ENST00000561425 HYIQ5T013 277 aa22.92■■□□□ 1.26
TPM1-232ENST00000561425 CDCA2Q69YH5 1023 aaPredicted RBP22.92■■□□□ 1.26
TPM1-232ENST00000561425 KCNT2Q6UVM3 1135 aa22.92■■□□□ 1.26
TPM1-232ENST00000561425 AGMOQ6ZNB7 445 aa22.92■■□□□ 1.26
TPM1-232ENST00000561425 KCTD17Q8N5Z5 321 aa22.92■■□□□ 1.26
TPM1-232ENST00000561425 RNF169Q8NCN4 708 aa22.92■■□□□ 1.26
TPM1-232ENST00000561425 LPPQ93052 612 aa22.92■■□□□ 1.26
TPM1-232ENST00000561425 PGBD4Q96DM1 585 aa22.92■■□□□ 1.26
TPM1-232ENST00000561425 MRPL9Q9BYD2 267 aaKnown RBP22.92■■□□□ 1.26
TPM1-232ENST00000561425 ARHGEF35A5YM69 484 aa22.91■■□□□ 1.26
TPM1-232ENST00000561425 FSCN2O14926 492 aa22.91■■□□□ 1.26
TPM1-232ENST00000561425 LTBRP36941 435 aa22.91■■□□□ 1.26
TPM1-232ENST00000561425 FAM187BQ17R55 369 aa22.91■■□□□ 1.26
TPM1-232ENST00000561425 SPOUT1Q5T280 376 aaKnown RBP22.91■■□□□ 1.26
TPM1-232ENST00000561425 PPP4R3CPQ6ZMV5 832 aa22.91■■□□□ 1.26
TPM1-232ENST00000561425 BRAPQ7Z569 592 aa22.91■■□□□ 1.26
TPM1-232ENST00000561425 SMG8Q8ND04 991 aaKnown RBP22.91■■□□□ 1.26
TPM1-232ENST00000561425 CNNM3Q8NE01 707 aa22.91■■□□□ 1.26
TPM1-232ENST00000561425 ADAMTS19Q8TE59 1207 aa22.91■■□□□ 1.26
TPM1-232ENST00000561425 SNX29Q8TEQ0 813 aa22.91■■□□□ 1.26
TPM1-232ENST00000561425 BSNDQ8WZ55 320 aa22.91■■□□□ 1.26
TPM1-232ENST00000561425 BHMT2Q9H2M3 363 aa22.91■■□□□ 1.26
TPM1-232ENST00000561425 FZD8Q9H461 694 aa22.91■■□□□ 1.26
TPM1-232ENST00000561425 DDX19AQ9NUU7 478 aaKnown RBP22.91■■□□□ 1.26
TPM1-232ENST00000561425 A0A1B0GUA9 196 aa22.9■■□□□ 1.26
TPM1-232ENST00000561425 PP2D1A8MPX8 630 aa22.9■■□□□ 1.26
TPM1-232ENST00000561425 INO80B-WBP1J3KQ70 363 aa22.9■■□□□ 1.26
TPM1-232ENST00000561425 INPPL1O15357 1258 aa22.9■■□□□ 1.26
TPM1-232ENST00000561425 ERLIN2O94905 339 aa22.9■■□□□ 1.26
TPM1-232ENST00000561425 EYA4O95677 639 aa22.9■■□□□ 1.26
TPM1-232ENST00000561425 CDC25AP30304 524 aa22.9■■□□□ 1.26
TPM1-232ENST00000561425 KRT79Q5XKE5 535 aa22.9■■□□□ 1.26
TPM1-232ENST00000561425 PDE12Q6L8Q7 609 aaKnown RBP22.9■■□□□ 1.26
TPM1-232ENST00000561425 MAEAQ7L5Y9 396 aa22.9■■□□□ 1.26
TPM1-232ENST00000561425 SLC39A11Q8N1S5 342 aa22.9■■□□□ 1.26
TPM1-232ENST00000561425 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.9■■□□□ 1.26
TPM1-232ENST00000561425 MRPS27Q92552 414 aaKnown RBP22.9■■□□□ 1.26
TPM1-232ENST00000561425 ZNF558Q96NG5 402 aa22.9■■□□□ 1.26
TPM1-232ENST00000561425 CSRNP2Q9H175 543 aa22.9■■□□□ 1.26
TPM1-232ENST00000561425 CNTNAP2Q9UHC6 1331 aa22.89■■□□□ 1.26
TPM1-232ENST00000561425 ATG2AQ2TAZ0 1938 aa22.89■■□□□ 1.25
TPM1-232ENST00000561425 ARF4P18085 180 aaPredicted RBP22.89■■□□□ 1.25
TPM1-232ENST00000561425 PDCP20941 246 aa22.89■■□□□ 1.25
TPM1-232ENST00000561425 PPM1AP35813 382 aa22.89■■□□□ 1.25
TPM1-232ENST00000561425 ADAM15Q13444 863 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms