RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 AFMP43652 599 aa11.8□□□□□ -0.52
TPM1-229ENST00000561242 YARSP54577 528 aaKnown RBP11.8□□□□□ -0.52
TPM1-229ENST00000561242 SLC12A3P55017 1021 aa11.8□□□□□ -0.52
TPM1-229ENST00000561242 PTENP60484 403 aa11.8□□□□□ -0.52
TPM1-229ENST00000561242 GRIN1Q05586 938 aa11.8□□□□□ -0.52
TPM1-229ENST00000561242 MGAT3Q09327 533 aa11.8□□□□□ -0.52
TPM1-229ENST00000561242 ALCAMQ13740 583 aa11.8□□□□□ -0.52
TPM1-229ENST00000561242 ECM1Q16610 540 aa11.8□□□□□ -0.52
TPM1-229ENST00000561242 FAM117BQ6P1L5 589 aa11.8□□□□□ -0.52
TPM1-229ENST00000561242 C1orf186Q6ZWK4 172 aa11.8□□□□□ -0.52
TPM1-229ENST00000561242 KSR1Q8IVT5 923 aa11.8□□□□□ -0.52
TPM1-229ENST00000561242 URGCPQ8TCY9 931 aa11.8□□□□□ -0.52
TPM1-229ENST00000561242 DDX12PQ92771 950 aa11.8□□□□□ -0.52
TPM1-229ENST00000561242 CCDC51Q96ER9 411 aa11.8□□□□□ -0.52
TPM1-229ENST00000561242 PRIMPOLQ96LW4 560 aa11.8□□□□□ -0.52
TPM1-229ENST00000561242 MMTAG2Q9BU76 263 aaKnown RBP11.8□□□□□ -0.52
TPM1-229ENST00000561242 MRPL4Q9BYD3 311 aaKnown RBP11.8□□□□□ -0.52
TPM1-229ENST00000561242 ADAMTS10Q9H324 1103 aa11.8□□□□□ -0.52
TPM1-229ENST00000561242 SLC28A3Q9HAS3 691 aa11.8□□□□□ -0.52
TPM1-229ENST00000561242 GPRC5CQ9NQ84 441 aa11.8□□□□□ -0.52
TPM1-229ENST00000561242 RMND1Q9NWS8 449 aa11.8□□□□□ -0.52
TPM1-229ENST00000561242 R3HCC1Q9Y3T6 440 aaKnown RBP11.8□□□□□ -0.52
TPM1-229ENST00000561242 INSL6Q9Y581 213 aa11.8□□□□□ -0.52
TPM1-229ENST00000561242 KIAA1217Q5T5P2 1943 aa11.8□□□□□ -0.52
TPM1-229ENST00000561242 SFI1A8K8P3 1242 aa11.79□□□□□ -0.52
TPM1-229ENST00000561242 ENPP3O14638 875 aa11.79□□□□□ -0.52
TPM1-229ENST00000561242 PRPF40AO75400 957 aaKnown RBP11.79□□□□□ -0.52
TPM1-229ENST00000561242 GCNT3O95395 438 aa11.79□□□□□ -0.52
TPM1-229ENST00000561242 PRKCBP05771 671 aa11.79□□□□□ -0.52
TPM1-229ENST00000561242 SLFN14P0C7P3 912 aa11.79□□□□□ -0.52
TPM1-229ENST00000561242 PFKFB1P16118 471 aa11.79□□□□□ -0.52
TPM1-229ENST00000561242 GLRA2P23416 452 aa11.79□□□□□ -0.52
TPM1-229ENST00000561242 LIG4P49917 911 aa11.79□□□□□ -0.52
TPM1-229ENST00000561242 UBE2HP62256 183 aa11.79□□□□□ -0.52
TPM1-229ENST00000561242 RNASELQ05823 741 aaKnown RBP11.79□□□□□ -0.52
TPM1-229ENST00000561242 SHC4Q6S5L8 630 aa11.79□□□□□ -0.52
TPM1-229ENST00000561242 NPAS4Q8IUM7 802 aa11.79□□□□□ -0.52
TPM1-229ENST00000561242 TMEM87AQ8NBN3 555 aa11.79□□□□□ -0.52
TPM1-229ENST00000561242 RSPH1Q8WYR4 309 aa11.79□□□□□ -0.52
TPM1-229ENST00000561242 WNT8BQ93098 351 aa11.79□□□□□ -0.52
TPM1-229ENST00000561242 RPS6KC1Q96S38 1066 aa11.79□□□□□ -0.52
TPM1-229ENST00000561242 RUSC1Q9BVN2 902 aa11.79□□□□□ -0.52
TPM1-229ENST00000561242 NFKBIZQ9BYH8 718 aa11.79□□□□□ -0.52
TPM1-229ENST00000561242 PCNTO95613 3336 aa11.79□□□□□ -0.52
TPM1-229ENST00000561242 LCTP09848 1927 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 SLC16A4O15374 487 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 ZNF202O95125 648 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 EOMESO95936 686 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 ITGA4P13612 1032 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 NPTX2P47972 431 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 SARSP49591 514 aaKnown RBP11.78□□□□□ -0.52
TPM1-229ENST00000561242 CACNB1Q02641 598 aaPredicted RBP11.78□□□□□ -0.52
TPM1-229ENST00000561242 DRP2Q13474 957 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 STIM1Q13586 685 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 CAPSQ13938 189 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 BTG3Q14201 252 aaPredicted RBP11.78□□□□□ -0.52
TPM1-229ENST00000561242 POSTNQ15063 836 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 KYAT1Q16773 422 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 SLFN12LQ6IEE8 588 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 CNNM4Q6P4Q7 775 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 GLB1LQ6UWU2 654 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 USP49Q70CQ1 688 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 FIBCD1Q8N539 461 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 ASAP3Q8TDY4 903 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 SPIRE2Q8WWL2 714 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 ACCSQ96QU6 501 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 RAD9AQ99638 391 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 CCDC94Q9BW85 323 aaPredicted RBP11.78□□□□□ -0.52
TPM1-229ENST00000561242 TMEM134Q9H6X4 195 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 TMEM206Q9H813 350 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 CDHR5Q9HBB8 845 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 ERVK-5Q9HDB9 667 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 RGS18Q9NS28 235 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 PARP2Q9UGN5 583 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 SERTAD1Q9UHV2 236 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 RWDD3Q9Y3V2 267 aa11.78□□□□□ -0.52
TPM1-229ENST00000561242 ACKR2O00590 384 aa11.77□□□□□ -0.53
TPM1-229ENST00000561242 LPXNO60711 386 aa11.77□□□□□ -0.53
TPM1-229ENST00000561242 CSDE1O75534 798 aaKnown RBP11.77□□□□□ -0.53
TPM1-229ENST00000561242 MAPTP10636 758 aaKnown RBP11.77□□□□□ -0.53
TPM1-229ENST00000561242 FGFR4P22455 802 aa11.77□□□□□ -0.53
TPM1-229ENST00000561242 WDR5P61964 334 aaKnown RBP11.77□□□□□ -0.53
TPM1-229ENST00000561242 SMAD3P84022 425 aaKnown RBP11.77□□□□□ -0.53
TPM1-229ENST00000561242 FAM160A1Q05DH4 1040 aa11.77□□□□□ -0.53
TPM1-229ENST00000561242 PSMD2Q13200 908 aa11.77□□□□□ -0.53
TPM1-229ENST00000561242 GIT2Q14161 759 aa11.77□□□□□ -0.53
TPM1-229ENST00000561242 DCAF4L1Q3SXM0 396 aa11.77□□□□□ -0.53
TPM1-229ENST00000561242 ZNF697Q5TEC3 545 aa11.77□□□□□ -0.53
TPM1-229ENST00000561242 SLC27A1Q6PCB7 646 aa11.77□□□□□ -0.53
TPM1-229ENST00000561242 HAUS6Q7Z4H7 955 aa11.77□□□□□ -0.53
TPM1-229ENST00000561242 FAM228AQ86W67 206 aa11.77□□□□□ -0.53
TPM1-229ENST00000561242 HERC6Q8IVU3 1022 aa11.77□□□□□ -0.53
TPM1-229ENST00000561242 LINC01465Q8N7H1 131 aa11.77□□□□□ -0.53
TPM1-229ENST00000561242 NOC3LQ8WTT2 800 aaKnown RBP11.77□□□□□ -0.53
TPM1-229ENST00000561242 CTAGE1Q96RT6 745 aa11.77□□□□□ -0.53
TPM1-229ENST00000561242 REEP2Q9BRK0 252 aa11.77□□□□□ -0.53
TPM1-229ENST00000561242 MRPL9Q9BYD2 267 aaKnown RBP11.77□□□□□ -0.53
TPM1-229ENST00000561242 AGO3Q9H9G7 860 aaKnown RBP11.77□□□□□ -0.53
TPM1-229ENST00000561242 POLD4Q9HCU8 107 aa11.77□□□□□ -0.53
TPM1-229ENST00000561242 XPNPEP1Q9NQW7 623 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms