RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 RGS17Q9UGC6 210 aaPredicted RBP15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 IGLV3-22A0A075B6J6 115 aa15.1■□□□□ 0.01
RABGGTA-220ENST00000560998 CLTAP09496 248 aa15.1■□□□□ 0.01
RABGGTA-220ENST00000560998 PABPC4Q13310 644 aaKnown RBP eCLIP15.1■□□□□ 0.01
RABGGTA-220ENST00000560998 GIT2Q14161 759 aa15.1■□□□□ 0.01
RABGGTA-220ENST00000560998 CCDC174Q6PII3 467 aa15.1■□□□□ 0.01
RABGGTA-220ENST00000560998 PIGWQ7Z7B1 504 aa15.1■□□□□ 0.01
RABGGTA-220ENST00000560998 GBP7Q8N8V2 638 aaPredicted RBP15.1■□□□□ 0.01
RABGGTA-220ENST00000560998 USP38Q8NB14 1042 aa15.1■□□□□ 0.01
RABGGTA-220ENST00000560998 CHURC1Q8WUH1 139 aa15.1■□□□□ 0.01
RABGGTA-220ENST00000560998 ZBTB10Q96DT7 871 aa15.1■□□□□ 0.01
RABGGTA-220ENST00000560998 MS4A14Q96JA4 679 aa15.1■□□□□ 0.01
RABGGTA-220ENST00000560998 POLR3CQ9BUI4 534 aaPredicted RBP15.1■□□□□ 0.01
RABGGTA-220ENST00000560998 TMEM39BQ9GZU3 492 aa15.1■□□□□ 0.01
RABGGTA-220ENST00000560998 EMILIN3Q9NT22 766 aa15.1■□□□□ 0.01
RABGGTA-220ENST00000560998 SAMD15Q9P1V8 674 aa15.1■□□□□ 0.01
RABGGTA-220ENST00000560998 CNOT8Q9UFF9 292 aaKnown RBP15.1■□□□□ 0.01
RABGGTA-220ENST00000560998 ZNRF3Q9ULT6 936 aa15.1■□□□□ 0.01
RABGGTA-220ENST00000560998 NOVA2Q9UNW9 492 aaKnown RBP15.1■□□□□ 0.01
RABGGTA-220ENST00000560998 PHF20L1A8MW92 1017 aa15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 PLA2G6O60733 806 aa15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 WFS1O76024 890 aa15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 GNA14O95837 355 aa15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 PLEKP08567 350 aaPredicted RBP15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 NQO1P15559 274 aaKnown RBP15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 MARSP56192 900 aaKnown RBP15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 POTEAQ6S8J7 498 aa15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 FAM83AQ86UY5 434 aa15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 PNMA8AQ86V59 439 aaPredicted RBP15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 HOOK3Q86VS8 718 aa15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 AGBL3Q8NEM8 1001 aa15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 ZFAND2BQ8WV99 257 aa15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 TBC1D5Q92609 795 aa15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 ZNF317Q96PQ6 595 aaPredicted RBP15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 CCDC134Q9H6E4 229 aa15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 ZFATQ9P243 1243 aa15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 EML1O00423 815 aa15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 FLOT1O75955 427 aa15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 CFBP00751 764 aa15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 POLR2MP0CAP2 368 aa15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 MAGOHP61326 146 aaKnown RBP15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 ERVK-9P63128 1117 aa15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 ROR2Q01974 943 aaKnown RBP15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 ASTE1Q2TB18 679 aaPredicted RBP15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 MEI1Q5TIA1 1274 aa15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 CWF19L1Q69YN2 538 aaKnown RBP15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 TRPM8Q7Z2W7 1104 aa15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 NIM1KQ8IY84 436 aa15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 BAP1Q92560 729 aa15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 MAGOHBQ96A72 148 aaKnown RBP15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 EIF2AK1Q9BQI3 630 aaKnown RBP15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 REEP2Q9BRK0 252 aa15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 WDR18Q9BV38 432 aa15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 TANGO6Q9C0B7 1094 aa15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 ZHX3Q9H4I2 956 aa15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 PGAP2Q9UHJ9 254 aa15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 PCDHGC5Q9Y5F6 944 aa15.09■□□□□ 0.01
RABGGTA-220ENST00000560998 ATAD5Q96QE3 1844 aa15.08■□□□□ 0
RABGGTA-220ENST00000560998 ENO4A6NNW6 628 aa15.08■□□□□ 0
RABGGTA-220ENST00000560998 DIAPH2O60879 1101 aa15.08■□□□□ 0
RABGGTA-220ENST00000560998 AP1G2O75843 785 aa15.08■□□□□ 0
RABGGTA-220ENST00000560998 CAP2P40123 477 aa15.08■□□□□ 0
RABGGTA-220ENST00000560998 KCNMA1Q12791 1236 aa15.08■□□□□ 0
RABGGTA-220ENST00000560998 EDRF1Q3B7T1 1238 aa15.08■□□□□ 0
RABGGTA-220ENST00000560998 CMPK2Q5EBM0 449 aa15.08■□□□□ 0
RABGGTA-220ENST00000560998 PPP4R3CPQ6ZMV5 832 aa15.08■□□□□ 0
RABGGTA-220ENST00000560998 MIGA2Q7L4E1 593 aa15.08■□□□□ 0
RABGGTA-220ENST00000560998 FAM160B2Q86V87 743 aa15.08■□□□□ 0
RABGGTA-220ENST00000560998 TRIM59Q8IWR1 403 aa15.08■□□□□ 0
RABGGTA-220ENST00000560998 ZBED3Q96IU2 234 aaPredicted RBP15.08■□□□□ 0
RABGGTA-220ENST00000560998 LRRC53A6NM62 1247 aa15.07■□□□□ 0
RABGGTA-220ENST00000560998 CTNND1O60716 968 aaKnown RBP15.07■□□□□ 0
RABGGTA-220ENST00000560998 RTN3O95197 1032 aaPredicted RBP15.07■□□□□ 0
RABGGTA-220ENST00000560998 EYA4O95677 639 aa15.07■□□□□ 0
RABGGTA-220ENST00000560998 GCLCP48506 637 aaPredicted RBP15.07■□□□□ 0
RABGGTA-220ENST00000560998 CASP5P51878 434 aa15.07■□□□□ 0
RABGGTA-220ENST00000560998 CYP4A11Q02928 519 aa15.07■□□□□ 0
RABGGTA-220ENST00000560998 ZYXQ15942 572 aaKnown RBP15.07■□□□□ 0
RABGGTA-220ENST00000560998 PDXDC1Q6P996 788 aa15.07■□□□□ 0
RABGGTA-220ENST00000560998 RRAGAQ7L523 313 aa15.07■□□□□ 0
RABGGTA-220ENST00000560998 EPM2AIP1Q7L775 607 aaPredicted RBP15.07■□□□□ 0
RABGGTA-220ENST00000560998 SFR1Q86XK3 245 aa15.07■□□□□ 0
RABGGTA-220ENST00000560998 KCTD17Q8N5Z5 321 aa15.07■□□□□ 0
RABGGTA-220ENST00000560998 DRAXINQ8NBI3 349 aaPredicted RBP15.07■□□□□ 0
RABGGTA-220ENST00000560998 PBKQ96KB5 322 aa15.07■□□□□ 0
RABGGTA-220ENST00000560998 IFT74Q96LB3 600 aa15.07■□□□□ 0
RABGGTA-220ENST00000560998 SALL4Q9UJQ4 1053 aa15.07■□□□□ 0
RABGGTA-220ENST00000560998 MRPL11Q9Y3B7 192 aaKnown RBP15.07■□□□□ 0
RABGGTA-220ENST00000560998 L3MBTL1Q9Y468 752 aa15.07■□□□□ 0
RABGGTA-220ENST00000560998 RBBP6Q7Z6E9 1792 aaKnown RBP15.07■□□□□ 0
RABGGTA-220ENST00000560998 LINGO3P0C6S8 592 aa15.07■□□□□ 0
RABGGTA-220ENST00000560998 PAPOLAP51003 745 aaKnown RBP15.07■□□□□ 0
RABGGTA-220ENST00000560998 MAP3K10Q02779 954 aa15.07■□□□□ 0
RABGGTA-220ENST00000560998 NAB2Q15742 525 aa15.07■□□□□ 0
RABGGTA-220ENST00000560998 KRT71Q3SY84 523 aa15.07■□□□□ 0
RABGGTA-220ENST00000560998 OTOP1Q7RTM1 612 aa15.07■□□□□ 0
RABGGTA-220ENST00000560998 CROCCP2Q86T23 111 aa15.07■□□□□ 0
RABGGTA-220ENST00000560998 TBC1D1Q86TI0 1168 aaPredicted RBP15.07■□□□□ 0
RABGGTA-220ENST00000560998 UBLCP1Q8WVY7 318 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms