RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 PYGMP11217 842 aa5.41□□□□□ -1.54
TMOD3-207ENST00000560549 CNR2P34972 360 aa5.41□□□□□ -1.54
TMOD3-207ENST00000560549 GABREP78334 506 aa5.41□□□□□ -1.54
TMOD3-207ENST00000560549 PAN2Q504Q3 1202 aaKnown RBP5.41□□□□□ -1.54
TMOD3-207ENST00000560549 FAM26FQ5R3K3 315 aa5.41□□□□□ -1.54
TMOD3-207ENST00000560549 KCTD1Q719H9 257 aa5.41□□□□□ -1.54
TMOD3-207ENST00000560549 CENPQQ7L2Z9 268 aaPredicted RBP5.41□□□□□ -1.54
TMOD3-207ENST00000560549 PRRT2Q7Z6L0 340 aaPredicted RBP5.41□□□□□ -1.54
TMOD3-207ENST00000560549 RNF180Q86T96 592 aa5.41□□□□□ -1.54
TMOD3-207ENST00000560549 MTDHQ86UE4 582 aaKnown RBP5.41□□□□□ -1.54
TMOD3-207ENST00000560549 TTLL6Q8N841 843 aa5.41□□□□□ -1.54
TMOD3-207ENST00000560549 TXNDC5Q8NBS9 432 aaKnown RBP5.41□□□□□ -1.54
TMOD3-207ENST00000560549 NGDNQ8NEJ9 315 aaKnown RBP5.41□□□□□ -1.54
TMOD3-207ENST00000560549 RBM15Q96T37 977 aaKnown RBP eCLIP5.41□□□□□ -1.54
TMOD3-207ENST00000560549 BDH2Q9BUT1 245 aa5.41□□□□□ -1.54
TMOD3-207ENST00000560549 TARS2Q9BW92 718 aaKnown RBP5.41□□□□□ -1.54
TMOD3-207ENST00000560549 PDGFDQ9GZP0 370 aaPredicted RBP5.41□□□□□ -1.54
TMOD3-207ENST00000560549 NGRNQ9NPE2 291 aaKnown RBP5.41□□□□□ -1.54
TMOD3-207ENST00000560549 BCCIPQ9P287 314 aaKnown RBP eCLIP5.41□□□□□ -1.54
TMOD3-207ENST00000560549 DSEQ9UL01 958 aa5.41□□□□□ -1.54
TMOD3-207ENST00000560549 NOB1Q9ULX3 412 aaKnown RBP5.41□□□□□ -1.54
TMOD3-207ENST00000560549 LAS1LQ9Y4W2 734 aaKnown RBP5.41□□□□□ -1.54
TMOD3-207ENST00000560549 NRKQ7Z2Y5 1582 aa5.41□□□□□ -1.54
TMOD3-207ENST00000560549 AKAP12Q02952 1782 aa5.41□□□□□ -1.54
TMOD3-207ENST00000560549 PEAK1Q9H792 1746 aa5.41□□□□□ -1.54
TMOD3-207ENST00000560549 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.4□□□□□ -1.54
TMOD3-207ENST00000560549 KCNK3O14649 394 aa5.4□□□□□ -1.54
TMOD3-207ENST00000560549 FAHP16930 419 aa5.4□□□□□ -1.54
TMOD3-207ENST00000560549 YY1P25490 414 aa5.4□□□□□ -1.54
TMOD3-207ENST00000560549 GJA9P57773 515 aa5.4□□□□□ -1.54
TMOD3-207ENST00000560549 SPIRE1Q08AE8 756 aa5.4□□□□□ -1.54
TMOD3-207ENST00000560549 SPATS1Q496A3 300 aa5.4□□□□□ -1.54
TMOD3-207ENST00000560549 CD276Q5ZPR3 534 aa5.4□□□□□ -1.54
TMOD3-207ENST00000560549 ZNF772Q68DY9 489 aaPredicted RBP5.4□□□□□ -1.54
TMOD3-207ENST00000560549 SULT6B1Q6IMI4 303 aa5.4□□□□□ -1.54
TMOD3-207ENST00000560549 ABHD17CQ6PCB6 329 aa5.4□□□□□ -1.54
TMOD3-207ENST00000560549 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.4□□□□□ -1.54
TMOD3-207ENST00000560549 DTX3Q8N9I9 347 aa5.4□□□□□ -1.54
TMOD3-207ENST00000560549 MBD6Q96DN6 1003 aa5.4□□□□□ -1.54
TMOD3-207ENST00000560549 ALG1Q9BT22 464 aa5.4□□□□□ -1.54
TMOD3-207ENST00000560549 PNNQ9H307 717 aaKnown RBP5.4□□□□□ -1.54
TMOD3-207ENST00000560549 TYW1Q9NV66 732 aaKnown RBP5.4□□□□□ -1.54
TMOD3-207ENST00000560549 USP40Q9NVE5 1235 aa5.4□□□□□ -1.54
TMOD3-207ENST00000560549 CROTQ9UKG9 612 aa5.4□□□□□ -1.54
TMOD3-207ENST00000560549 JAG2Q9Y219 1238 aa5.4□□□□□ -1.54
TMOD3-207ENST00000560549 MST1RQ04912 1400 aa5.4□□□□□ -1.55
TMOD3-207ENST00000560549 TTC21AQ8NDW8 1320 aa5.4□□□□□ -1.55
TMOD3-207ENST00000560549 FAM90A27PA6NNH2 459 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 MAN2B1O00754 1011 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 AQP7O14520 342 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 MAFKO60675 156 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 EIF3JO75822 258 aaKnown RBP5.39□□□□□ -1.55
TMOD3-207ENST00000560549 ADRB1P08588 477 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 CT47B1P0C2W7 299 aaPredicted RBP5.39□□□□□ -1.55
TMOD3-207ENST00000560549 SRGAP2CP0DJJ0 459 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 TRIM27P14373 513 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 PDE6AP16499 860 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 STAT3P40763 770 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 JAM2P57087 298 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 GUCY1A3Q02108 690 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 PAK1Q13153 545 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 UBXN11Q5T124 520 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 ZKSCAN2Q63HK3 967 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 KRT26Q7Z3Y9 468 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 LRRTM3Q86VH5 581 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 C8orf58Q8NAV2 365 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 PMM1Q92871 262 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 SMURF1Q9HCE7 757 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 SMC4Q9NTJ3 1288 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 SRPK3Q9UPE1 567 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 TNPO3Q9Y5L0 923 aaKnown RBP5.39□□□□□ -1.55
TMOD3-207ENST00000560549 PHLPP1O60346 1717 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 ANKARQ7Z5J8 1434 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 TCRBV16S1A1N1A0A5B0 115 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 ZNF561-AS1K7EIQ3 104 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 ELL2O00472 640 aaPredicted RBP5.39□□□□□ -1.55
TMOD3-207ENST00000560549 B4GALT3O60512 393 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 PDE8AO60658 829 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 IL18BPO95998 194 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 S100BP04271 92 aaPredicted RBP5.39□□□□□ -1.55
TMOD3-207ENST00000560549 ITGB3P05106 788 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 CKMP06732 381 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 MYCLP1P12525 358 aaPredicted RBP5.39□□□□□ -1.55
TMOD3-207ENST00000560549 PLP2Q04941 152 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 MVPQ14764 893 aaKnown RBP5.39□□□□□ -1.55
TMOD3-207ENST00000560549 KRT24Q2M2I5 525 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 BRINP3Q76B58 766 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 MCM10Q7L590 875 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 OSTM1Q86WC4 334 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 PTRH1Q86Y79 214 aaKnown RBP5.39□□□□□ -1.55
TMOD3-207ENST00000560549 TRIM48Q8IWZ4 208 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 IPO9Q96P70 1041 aaKnown RBP5.39□□□□□ -1.55
TMOD3-207ENST00000560549 MTFR1LQ9H019 292 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 GABBR1Q9UBS5 961 aa5.39□□□□□ -1.55
TMOD3-207ENST00000560549 C1orf167Q5SNV9 1468 aa5.38□□□□□ -1.55
TMOD3-207ENST00000560549 FMN2Q9NZ56 1722 aa5.38□□□□□ -1.55
TMOD3-207ENST00000560549 AHDC1Q5TGY3 1603 aaPredicted RBP5.38□□□□□ -1.55
TMOD3-207ENST00000560549 PDGFRBP09619 1106 aa5.38□□□□□ -1.55
TMOD3-207ENST00000560549 HOXC9P31274 260 aa5.38□□□□□ -1.55
TMOD3-207ENST00000560549 RGS3P49796 1198 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms