RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 ZBTB43O43298 467 aa20.08■□□□□ 0.81
TSPAN3-208ENST00000560514 CNPP09543 421 aaKnown RBP20.08■□□□□ 0.81
TSPAN3-208ENST00000560514 SPECC1Q5M775 1068 aa20.08■□□□□ 0.81
TSPAN3-208ENST00000560514 FEZF2Q8TBJ5 459 aa20.08■□□□□ 0.81
TSPAN3-208ENST00000560514 BCL7CQ8WUZ0 217 aaPredicted RBP20.08■□□□□ 0.81
TSPAN3-208ENST00000560514 TRAIPQ9BWF2 469 aa20.08■□□□□ 0.81
TSPAN3-208ENST00000560514 TBC1D17Q9HA65 648 aa20.08■□□□□ 0.81
TSPAN3-208ENST00000560514 C6orf50Q9HD87 102 aa20.08■□□□□ 0.81
TSPAN3-208ENST00000560514 FAM105AQ9NUU6 356 aa20.08■□□□□ 0.81
TSPAN3-208ENST00000560514 DNAJB4Q9UDY4 337 aa20.08■□□□□ 0.81
TSPAN3-208ENST00000560514 ALDH2P05091 517 aa20.07■□□□□ 0.8
TSPAN3-208ENST00000560514 SLC11A1P49279 550 aa20.07■□□□□ 0.8
TSPAN3-208ENST00000560514 CMASQ8NFW8 434 aaPredicted RBP20.07■□□□□ 0.8
TSPAN3-208ENST00000560514 CCDC12Q8WUD4 166 aaPredicted RBP20.07■□□□□ 0.8
TSPAN3-208ENST00000560514 RSAD2Q8WXG1 361 aa20.07■□□□□ 0.8
TSPAN3-208ENST00000560514 RUBCNQ92622 972 aa20.07■□□□□ 0.8
TSPAN3-208ENST00000560514 NXPE3Q969Y0 559 aa20.07■□□□□ 0.8
TSPAN3-208ENST00000560514 MAN1C1Q9NR34 630 aa20.07■□□□□ 0.8
TSPAN3-208ENST00000560514 SSX2IPQ9Y2D8 614 aa20.07■□□□□ 0.8
TSPAN3-208ENST00000560514 ZNF292O60281 2723 aa20.07■□□□□ 0.8
TSPAN3-208ENST00000560514 A0A087WZ62 844 aa20.06■□□□□ 0.8
TSPAN3-208ENST00000560514 CCDC195A0A1B0GUA6 201 aa20.06■□□□□ 0.8
TSPAN3-208ENST00000560514 KRBA1A5PL33 1030 aa20.06■□□□□ 0.8
TSPAN3-208ENST00000560514 GOLGA8AA7E2F4 631 aa20.06■□□□□ 0.8
TSPAN3-208ENST00000560514 GOLGA8BA8MQT2 603 aa20.06■□□□□ 0.8
TSPAN3-208ENST00000560514 ZNF862O60290 1169 aa20.06■□□□□ 0.8
TSPAN3-208ENST00000560514 OFD1O75665 1012 aa20.06■□□□□ 0.8
TSPAN3-208ENST00000560514 URODP06132 367 aa20.06■□□□□ 0.8
TSPAN3-208ENST00000560514 ADH1AP07327 375 aa20.06■□□□□ 0.8
TSPAN3-208ENST00000560514 SRFP11831 508 aa20.06■□□□□ 0.8
TSPAN3-208ENST00000560514 CREB3L3Q68CJ9 461 aa20.06■□□□□ 0.8
TSPAN3-208ENST00000560514 CYP26C1Q6V0L0 522 aa20.06■□□□□ 0.8
TSPAN3-208ENST00000560514 CATSPER4Q7RTX7 472 aa20.06■□□□□ 0.8
TSPAN3-208ENST00000560514 REXO1Q8N1G1 1221 aaKnown RBP20.06■□□□□ 0.8
TSPAN3-208ENST00000560514 CRYGNQ8WXF5 182 aa20.06■□□□□ 0.8
TSPAN3-208ENST00000560514 FDXACB1Q9BRP7 624 aaPredicted RBP20.06■□□□□ 0.8
TSPAN3-208ENST00000560514 WDR6Q9NNW5 1121 aaKnown RBP20.06■□□□□ 0.8
TSPAN3-208ENST00000560514 SEPT9Q9UHD8 586 aaPredicted RBP20.06■□□□□ 0.8
TSPAN3-208ENST00000560514 FAN1Q9Y2M0 1017 aa20.06■□□□□ 0.8
TSPAN3-208ENST00000560514 SIT1Q9Y3P8 196 aa20.06■□□□□ 0.8
TSPAN3-208ENST00000560514 DMXL1Q9Y485 3027 aa20.05■□□□□ 0.8
TSPAN3-208ENST00000560514 C2CD2LO14523 706 aa20.05■□□□□ 0.8
TSPAN3-208ENST00000560514 CHMP2AO43633 222 aa20.05■□□□□ 0.8
TSPAN3-208ENST00000560514 SFNP31947 248 aa20.05■□□□□ 0.8
TSPAN3-208ENST00000560514 AK2P54819 239 aa20.05■□□□□ 0.8
TSPAN3-208ENST00000560514 FUT2Q10981 343 aa20.05■□□□□ 0.8
TSPAN3-208ENST00000560514 COL9A3Q14050 684 aaPredicted RBP20.05■□□□□ 0.8
TSPAN3-208ENST00000560514 MTERF2Q49AM1 385 aa20.05■□□□□ 0.8
TSPAN3-208ENST00000560514 SLC44A3Q8N4M1 653 aa20.05■□□□□ 0.8
TSPAN3-208ENST00000560514 VN1R3Q9BXE9 311 aa20.05■□□□□ 0.8
TSPAN3-208ENST00000560514 KANSL3Q9P2N6 904 aa20.05■□□□□ 0.8
TSPAN3-208ENST00000560514 NAP1L2Q9ULW6 460 aaPredicted RBP20.05■□□□□ 0.8
TSPAN3-208ENST00000560514 CLUHO75153 1309 aa20.04■□□□□ 0.8
TSPAN3-208ENST00000560514 INPPL1O15357 1258 aa20.04■□□□□ 0.8
TSPAN3-208ENST00000560514 GAS7O60861 476 aa20.04■□□□□ 0.8
TSPAN3-208ENST00000560514 ZNF623O75123 536 aa20.04■□□□□ 0.8
TSPAN3-208ENST00000560514 GLUD1P00367 558 aa20.04■□□□□ 0.8
TSPAN3-208ENST00000560514 DCNP07585 359 aaKnown RBP20.04■□□□□ 0.8
TSPAN3-208ENST00000560514 GNA11P29992 359 aa20.04■□□□□ 0.8
TSPAN3-208ENST00000560514 JAK3P52333 1124 aa20.04■□□□□ 0.8
TSPAN3-208ENST00000560514 PFKFB3Q16875 520 aaPredicted RBP20.04■□□□□ 0.8
TSPAN3-208ENST00000560514 RNF20Q5VTR2 975 aa20.04■□□□□ 0.8
TSPAN3-208ENST00000560514 ZNF410Q86VK4 478 aa20.04■□□□□ 0.8
TSPAN3-208ENST00000560514 ZNF280BQ86YH2 543 aa20.04■□□□□ 0.8
TSPAN3-208ENST00000560514 RHPN2Q8IUC4 686 aa20.04■□□□□ 0.8
TSPAN3-208ENST00000560514 C1orf210Q8IVY1 113 aa20.04■□□□□ 0.8
TSPAN3-208ENST00000560514 TMEM175Q9BSA9 504 aa20.04■□□□□ 0.8
TSPAN3-208ENST00000560514 LSG1Q9H089 658 aaKnown RBP20.04■□□□□ 0.8
TSPAN3-208ENST00000560514 PIDD1Q9HB75 910 aa20.04■□□□□ 0.8
TSPAN3-208ENST00000560514 EPS15L1Q9UBC2 864 aa20.04■□□□□ 0.8
TSPAN3-208ENST00000560514 WDR87Q6ZQQ6 2873 aa20.04■□□□□ 0.8
TSPAN3-208ENST00000560514 CACNA1BQ00975 2339 aa20.03■□□□□ 0.8
TSPAN3-208ENST00000560514 MEIS3P2A8K0S8 358 aa20.03■□□□□ 0.8
TSPAN3-208ENST00000560514 SP9P0CG40 484 aa20.03■□□□□ 0.8
TSPAN3-208ENST00000560514 DRP2Q13474 957 aa20.03■□□□□ 0.8
TSPAN3-208ENST00000560514 UGCGQ16739 394 aa20.03■□□□□ 0.8
TSPAN3-208ENST00000560514 PHLDB3Q6NSJ2 640 aa20.03■□□□□ 0.8
TSPAN3-208ENST00000560514 GPR152Q8TDT2 470 aa20.03■□□□□ 0.8
TSPAN3-208ENST00000560514 SMG7Q92540 1137 aaKnown RBP20.03■□□□□ 0.8
TSPAN3-208ENST00000560514 TEKT3Q9BXF9 490 aa20.03■□□□□ 0.8
TSPAN3-208ENST00000560514 ZMYND12Q9H0C1 365 aa20.03■□□□□ 0.8
TSPAN3-208ENST00000560514 ARHGEF3Q9NR81 526 aa20.03■□□□□ 0.8
TSPAN3-208ENST00000560514 SUCLA2Q9P2R7 463 aaPredicted RBP20.03■□□□□ 0.8
TSPAN3-208ENST00000560514 PCDHB2Q9Y5E7 798 aa20.03■□□□□ 0.8
TSPAN3-208ENST00000560514 DNAH14Q0VDD8 3507 aa20.02■□□□□ 0.8
TSPAN3-208ENST00000560514 ESYT2A0FGR8 921 aa20.02■□□□□ 0.8
TSPAN3-208ENST00000560514 KINO60870 393 aaKnown RBP20.02■□□□□ 0.8
TSPAN3-208ENST00000560514 N4BP1O75113 896 aaKnown RBP20.02■□□□□ 0.8
TSPAN3-208ENST00000560514 SOD2P04179 222 aa20.02■□□□□ 0.8
TSPAN3-208ENST00000560514 CIITAP33076 1130 aa20.02■□□□□ 0.8
TSPAN3-208ENST00000560514 NECTIN1Q15223 517 aa20.02■□□□□ 0.8
TSPAN3-208ENST00000560514 TARBP2Q15633 366 aaKnown RBP20.02■□□□□ 0.8
TSPAN3-208ENST00000560514 LRCH2Q5VUJ6 765 aa20.02■□□□□ 0.8
TSPAN3-208ENST00000560514 BICD2Q8TD16 824 aa20.02■□□□□ 0.8
TSPAN3-208ENST00000560514 NLRP4Q96MN2 994 aa20.02■□□□□ 0.8
TSPAN3-208ENST00000560514 RIT2Q99578 217 aa20.02■□□□□ 0.8
TSPAN3-208ENST00000560514 RHOBTB2Q9BYZ6 727 aa20.02■□□□□ 0.8
TSPAN3-208ENST00000560514 RSAD1Q9HA92 442 aa20.02■□□□□ 0.8
TSPAN3-208ENST00000560514 ANO2Q9NQ90 1003 aa20.02■□□□□ 0.8
TSPAN3-208ENST00000560514 BRPF3Q9ULD4 1205 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms