RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 INPP5FQ9Y2H2 1132 aa10.49□□□□□ -0.73
SMAD3-215ENST00000560424 MIA3Q5JRA6 1907 aa10.48□□□□□ -0.73
SMAD3-215ENST00000560424 KANSL1LA0AUZ9 987 aa10.48□□□□□ -0.73
SMAD3-215ENST00000560424 C2CD2LO14523 706 aa10.48□□□□□ -0.73
SMAD3-215ENST00000560424 MAGEB2O15479 319 aa10.48□□□□□ -0.73
SMAD3-215ENST00000560424 TBC1D4O60343 1298 aa10.48□□□□□ -0.73
SMAD3-215ENST00000560424 N4BP1O75113 896 aaKnown RBP10.48□□□□□ -0.73
SMAD3-215ENST00000560424 CD2BP2O95400 341 aaKnown RBP10.48□□□□□ -0.73
SMAD3-215ENST00000560424 C22orf31O95567 290 aa10.48□□□□□ -0.73
SMAD3-215ENST00000560424 GLUD1P00367 558 aa10.48□□□□□ -0.73
SMAD3-215ENST00000560424 URODP06132 367 aa10.48□□□□□ -0.73
SMAD3-215ENST00000560424 ADH1AP07327 375 aa10.48□□□□□ -0.73
SMAD3-215ENST00000560424 CNPP09543 421 aaKnown RBP10.48□□□□□ -0.73
SMAD3-215ENST00000560424 SKIP12755 728 aa10.48□□□□□ -0.73
SMAD3-215ENST00000560424 ZNF76P36508 570 aa10.48□□□□□ -0.73
SMAD3-215ENST00000560424 CLCN3P51790 818 aa10.48□□□□□ -0.73
SMAD3-215ENST00000560424 AK2P54819 239 aa10.48□□□□□ -0.73
SMAD3-215ENST00000560424 COL9A3Q14050 684 aaPredicted RBP10.48□□□□□ -0.73
SMAD3-215ENST00000560424 SWSAP1Q6NVH7 229 aa10.48□□□□□ -0.73
SMAD3-215ENST00000560424 GET4Q7L5D6 327 aaPredicted RBP10.48□□□□□ -0.73
SMAD3-215ENST00000560424 TMEM173Q86WV6 379 aaPredicted RBP10.48□□□□□ -0.73
SMAD3-215ENST00000560424 FEZF2Q8TBJ5 459 aa10.48□□□□□ -0.73
SMAD3-215ENST00000560424 NETO1Q8TDF5 533 aa10.48□□□□□ -0.73
SMAD3-215ENST00000560424 NLRP7Q8WX94 980 aa10.48□□□□□ -0.73
SMAD3-215ENST00000560424 BBXQ8WY36 941 aaPredicted RBP10.48□□□□□ -0.73
SMAD3-215ENST00000560424 SMG7Q92540 1137 aaKnown RBP10.48□□□□□ -0.73
SMAD3-215ENST00000560424 LZTS2Q9BRK4 669 aa10.48□□□□□ -0.73
SMAD3-215ENST00000560424 SLC2A4RGQ9NR83 387 aa10.48□□□□□ -0.73
SMAD3-215ENST00000560424 ZSCAN32Q9NX65 697 aa10.48□□□□□ -0.73
SMAD3-215ENST00000560424 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.48□□□□□ -0.73
SMAD3-215ENST00000560424 SSX2IPQ9Y2D8 614 aa10.48□□□□□ -0.73
SMAD3-215ENST00000560424 CYP46A1Q9Y6A2 500 aa10.48□□□□□ -0.73
SMAD3-215ENST00000560424 WDR87Q6ZQQ6 2873 aa10.47□□□□□ -0.73
SMAD3-215ENST00000560424 LRRN2O75325 713 aa10.47□□□□□ -0.73
SMAD3-215ENST00000560424 ATG7O95352 703 aa10.47□□□□□ -0.73
SMAD3-215ENST00000560424 GALTP07902 379 aa10.47□□□□□ -0.73
SMAD3-215ENST00000560424 MYBP10242 640 aa10.47□□□□□ -0.73
SMAD3-215ENST00000560424 GLULP15104 373 aa10.47□□□□□ -0.73
SMAD3-215ENST00000560424 MAGEA9P43362 315 aa10.47□□□□□ -0.73
SMAD3-215ENST00000560424 GNAQP50148 359 aa10.47□□□□□ -0.73
SMAD3-215ENST00000560424 STARD6P59095 220 aa10.47□□□□□ -0.73
SMAD3-215ENST00000560424 CUL4AQ13619 759 aa10.47□□□□□ -0.73
SMAD3-215ENST00000560424 ANKRD1Q15327 319 aa10.47□□□□□ -0.73
SMAD3-215ENST00000560424 ADCK5Q3MIX3 580 aa10.47□□□□□ -0.73
SMAD3-215ENST00000560424 LONRF3Q496Y0 759 aa10.47□□□□□ -0.73
SMAD3-215ENST00000560424 NOMO2Q5JPE7 1267 aa10.47□□□□□ -0.73
SMAD3-215ENST00000560424 TWF2Q6IBS0 349 aaKnown RBP10.47□□□□□ -0.73
SMAD3-215ENST00000560424 EFCAB12Q6NXP0 572 aa10.47□□□□□ -0.73
SMAD3-215ENST00000560424 BLOC1S2Q6QNY1 142 aa10.47□□□□□ -0.73
SMAD3-215ENST00000560424 CCDC60Q8IWA6 550 aaPredicted RBP10.47□□□□□ -0.73
SMAD3-215ENST00000560424 URGCPQ8TCY9 931 aa10.47□□□□□ -0.73
SMAD3-215ENST00000560424 INTS4Q96HW7 963 aaKnown RBP10.47□□□□□ -0.73
SMAD3-215ENST00000560424 ZNF668Q96K58 619 aaPredicted RBP10.47□□□□□ -0.73
SMAD3-215ENST00000560424 JAKMIP1Q96N16 626 aaKnown RBP10.47□□□□□ -0.73
SMAD3-215ENST00000560424 MYADMQ96S97 322 aa10.47□□□□□ -0.73
SMAD3-215ENST00000560424 AGXT2Q9BYV1 514 aa10.47□□□□□ -0.73
SMAD3-215ENST00000560424 EPC1Q9H2F5 836 aa10.47□□□□□ -0.73
SMAD3-215ENST00000560424 NRDE2Q9H7Z3 1164 aa10.47□□□□□ -0.73
SMAD3-215ENST00000560424 AGO4Q9HCK5 861 aaKnown RBP10.47□□□□□ -0.73
SMAD3-215ENST00000560424 SH2B1Q9NRF2 756 aaPredicted RBP10.47□□□□□ -0.73
SMAD3-215ENST00000560424 TBC1D13Q9NVG8 400 aa10.47□□□□□ -0.73
SMAD3-215ENST00000560424 RALYQ9UKM9 306 aaKnown RBP10.47□□□□□ -0.73
SMAD3-215ENST00000560424 ANGPTL2Q9UKU9 493 aa10.47□□□□□ -0.73
SMAD3-215ENST00000560424 NUMBLQ9Y6R0 609 aa10.47□□□□□ -0.73
SMAD3-215ENST00000560424 CACNA1IQ9P0X4 2223 aa10.46□□□□□ -0.73
SMAD3-215ENST00000560424 IGKV6D-21A0A0A0MT36 114 aa10.46□□□□□ -0.73
SMAD3-215ENST00000560424 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.46□□□□□ -0.73
SMAD3-215ENST00000560424 NCAM2O15394 837 aa10.46□□□□□ -0.73
SMAD3-215ENST00000560424 LAMP2P13473 410 aa10.46□□□□□ -0.73
SMAD3-215ENST00000560424 FGFR4P22455 802 aa10.46□□□□□ -0.73
SMAD3-215ENST00000560424 RPS6KB1P23443 525 aa10.46□□□□□ -0.73
SMAD3-215ENST00000560424 SMARCA1P28370 1054 aa10.46□□□□□ -0.73
SMAD3-215ENST00000560424 DDIT3P35638 169 aa10.46□□□□□ -0.73
SMAD3-215ENST00000560424 ITGB3BPQ13352 177 aaPredicted RBP10.46□□□□□ -0.73
SMAD3-215ENST00000560424 SNW1Q13573 536 aaKnown RBP10.46□□□□□ -0.73
SMAD3-215ENST00000560424 ACAP1Q15027 740 aa10.46□□□□□ -0.73
SMAD3-215ENST00000560424 CEP55Q53EZ4 464 aa10.46□□□□□ -0.73
SMAD3-215ENST00000560424 ABHD15Q6UXT9 468 aa10.46□□□□□ -0.73
SMAD3-215ENST00000560424 HEATR3Q7Z4Q2 680 aa10.46□□□□□ -0.73
SMAD3-215ENST00000560424 ZNF598Q86UK7 904 aaKnown RBP10.46□□□□□ -0.73
SMAD3-215ENST00000560424 MAML2Q8IZL2 1156 aaPredicted RBP10.46□□□□□ -0.73
SMAD3-215ENST00000560424 LRRC71Q8N4P6 559 aa10.46□□□□□ -0.73
SMAD3-215ENST00000560424 NCOA7Q8NI08 942 aa10.46□□□□□ -0.73
SMAD3-215ENST00000560424 DDX1Q92499 740 aaKnown RBP10.46□□□□□ -0.73
SMAD3-215ENST00000560424 MTA3Q9BTC8 594 aa10.46□□□□□ -0.73
SMAD3-215ENST00000560424 SENP2Q9HC62 589 aa10.46□□□□□ -0.73
SMAD3-215ENST00000560424 FAN1Q9Y2M0 1017 aa10.46□□□□□ -0.73
SMAD3-215ENST00000560424 BAHCC1Q9P281 2608 aa10.46□□□□□ -0.74
SMAD3-215ENST00000560424 CFAP47Q6ZTR5 3102 aa10.45□□□□□ -0.74
SMAD3-215ENST00000560424 FAM170BA6NMN3 283 aa10.45□□□□□ -0.74
SMAD3-215ENST00000560424 ZBTB42B2RXF5 422 aa10.45□□□□□ -0.74
SMAD3-215ENST00000560424 E7EWF7 191 aa10.45□□□□□ -0.74
SMAD3-215ENST00000560424 SLC30A4O14863 429 aa10.45□□□□□ -0.74
SMAD3-215ENST00000560424 DDAH1O94760 285 aa10.45□□□□□ -0.74
SMAD3-215ENST00000560424 ALDH2P05091 517 aa10.45□□□□□ -0.74
SMAD3-215ENST00000560424 DARSP14868 501 aaKnown RBP10.45□□□□□ -0.74
SMAD3-215ENST00000560424 SFPQP23246 707 aaKnown RBP eCLIP10.45□□□□□ -0.74
SMAD3-215ENST00000560424 PHKA2P46019 1235 aa10.45□□□□□ -0.74
SMAD3-215ENST00000560424 SLC11A1P49279 550 aa10.45□□□□□ -0.74
SMAD3-215ENST00000560424 RAB27AP51159 221 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms