RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 SLC7A3Q8WY07 619 aa15.18■□□□□ 0.02
SMAD3-214ENST00000560402 TMEM169Q96HH4 297 aa15.18■□□□□ 0.02
SMAD3-214ENST00000560402 FDXACB1Q9BRP7 624 aaPredicted RBP15.18■□□□□ 0.02
SMAD3-214ENST00000560402 CYP26B1Q9NR63 512 aa15.18■□□□□ 0.02
SMAD3-214ENST00000560402 SH2B1Q9NRF2 756 aaPredicted RBP15.18■□□□□ 0.02
SMAD3-214ENST00000560402 SUCLA2Q9P2R7 463 aaPredicted RBP15.18■□□□□ 0.02
SMAD3-214ENST00000560402 STK39Q9UEW8 545 aa15.18■□□□□ 0.02
SMAD3-214ENST00000560402 VAV3Q9UKW4 847 aa15.18■□□□□ 0.02
SMAD3-214ENST00000560402 PIN4Q9Y237 131 aaKnown RBP15.18■□□□□ 0.02
SMAD3-214ENST00000560402 KMT2EQ8IZD2 1858 aa15.18■□□□□ 0.02
SMAD3-214ENST00000560402 DDIT3P35638 169 aa15.17■□□□□ 0.02
SMAD3-214ENST00000560402 RFC5P40937 340 aa15.17■□□□□ 0.02
SMAD3-214ENST00000560402 SCRN1Q12765 414 aa15.17■□□□□ 0.02
SMAD3-214ENST00000560402 GLB1LQ6UWU2 654 aa15.17■□□□□ 0.02
SMAD3-214ENST00000560402 ANO5Q75V66 913 aa15.17■□□□□ 0.02
SMAD3-214ENST00000560402 RHPN2Q8IUC4 686 aa15.17■□□□□ 0.02
SMAD3-214ENST00000560402 WASF1Q92558 559 aa15.17■□□□□ 0.02
SMAD3-214ENST00000560402 TMX3Q96JJ7 454 aa15.17■□□□□ 0.02
SMAD3-214ENST00000560402 AIFM3Q96NN9 605 aa15.17■□□□□ 0.02
SMAD3-214ENST00000560402 LIMCH1Q9UPQ0 1083 aa15.17■□□□□ 0.02
SMAD3-214ENST00000560402 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.17■□□□□ 0.02
SMAD3-214ENST00000560402 DENND4AQ7Z401 1863 aa15.16■□□□□ 0.02
SMAD3-214ENST00000560402 TMEM150BA6NC51 233 aa15.16■□□□□ 0.02
SMAD3-214ENST00000560402 C2orf71A6NGG8 1288 aa15.16■□□□□ 0.02
SMAD3-214ENST00000560402 HIDE1A8MVS5 230 aa15.16■□□□□ 0.02
SMAD3-214ENST00000560402 ZNF623O75123 536 aa15.16■□□□□ 0.02
SMAD3-214ENST00000560402 P4HBP07237 508 aaKnown RBP15.16■□□□□ 0.02
SMAD3-214ENST00000560402 PBX3P40426 434 aa15.16■□□□□ 0.02
SMAD3-214ENST00000560402 POLGP54098 1239 aaPredicted RBP15.16■□□□□ 0.02
SMAD3-214ENST00000560402 BCAR1P56945 870 aa15.16■□□□□ 0.02
SMAD3-214ENST00000560402 ZXDAP98168 799 aa15.16■□□□□ 0.02
SMAD3-214ENST00000560402 GIT2Q14161 759 aa15.16■□□□□ 0.02
SMAD3-214ENST00000560402 PLA2G4FQ68DD2 849 aa15.16■□□□□ 0.02
SMAD3-214ENST00000560402 TRIM67Q6ZTA4 783 aa15.16■□□□□ 0.02
SMAD3-214ENST00000560402 CATSPER4Q7RTX7 472 aa15.16■□□□□ 0.02
SMAD3-214ENST00000560402 C4orf19Q8IY42 314 aa15.16■□□□□ 0.02
SMAD3-214ENST00000560402 MRPL43Q8N983 215 aaKnown RBP15.16■□□□□ 0.02
SMAD3-214ENST00000560402 PSPC1Q8WXF1 523 aaKnown RBP15.16■□□□□ 0.02
SMAD3-214ENST00000560402 PGBD4Q96DM1 585 aa15.16■□□□□ 0.02
SMAD3-214ENST00000560402 NLRP4Q96MN2 994 aa15.16■□□□□ 0.02
SMAD3-214ENST00000560402 NECTIN4Q96NY8 510 aa15.16■□□□□ 0.02
SMAD3-214ENST00000560402 PRRX2Q99811 253 aa15.16■□□□□ 0.02
SMAD3-214ENST00000560402 S1PR5Q9H228 398 aa15.16■□□□□ 0.02
SMAD3-214ENST00000560402 DHX33Q9H6R0 707 aaKnown RBP15.16■□□□□ 0.02
SMAD3-214ENST00000560402 BRMS1Q9HCU9 246 aa15.16■□□□□ 0.02
SMAD3-214ENST00000560402 AGPAT5Q9NUQ2 364 aa15.16■□□□□ 0.02
SMAD3-214ENST00000560402 FAM105AQ9NUU6 356 aa15.16■□□□□ 0.02
SMAD3-214ENST00000560402 DZANK1Q9NVP4 752 aa15.16■□□□□ 0.02
SMAD3-214ENST00000560402 KCNJ14Q9UNX9 436 aa15.16■□□□□ 0.02
SMAD3-214ENST00000560402 COL4A3BPQ9Y5P4 624 aa15.16■□□□□ 0.02
SMAD3-214ENST00000560402 HCFC2Q9Y5Z7 792 aa15.16■□□□□ 0.02
SMAD3-214ENST00000560402 IRAK3Q9Y616 596 aa15.16■□□□□ 0.02
SMAD3-214ENST00000560402 CNTNAP2Q9UHC6 1331 aa15.16■□□□□ 0.02
SMAD3-214ENST00000560402 TMEM221A6NGB7 291 aa15.15■□□□□ 0.02
SMAD3-214ENST00000560402 M0R296 226 aa15.15■□□□□ 0.02
SMAD3-214ENST00000560402 EML1O00423 815 aa15.15■□□□□ 0.02
SMAD3-214ENST00000560402 CCNT1O60563 726 aaKnown RBP15.15■□□□□ 0.02
SMAD3-214ENST00000560402 PFKFB2O60825 505 aa15.15■□□□□ 0.02
SMAD3-214ENST00000560402 ZC3H11AO75152 810 aaKnown RBP eCLIP15.15■□□□□ 0.02
SMAD3-214ENST00000560402 CSDE1O75534 798 aaKnown RBP15.15■□□□□ 0.02
SMAD3-214ENST00000560402 RBM10P98175 930 aaKnown RBP15.15■□□□□ 0.02
SMAD3-214ENST00000560402 ITIH3Q06033 890 aa15.15■□□□□ 0.02
SMAD3-214ENST00000560402 CUL4AQ13619 759 aa15.15■□□□□ 0.02
SMAD3-214ENST00000560402 NOMO2Q5JPE7 1267 aa15.15■□□□□ 0.02
SMAD3-214ENST00000560402 CES5AQ6NT32 575 aa15.15■□□□□ 0.02
SMAD3-214ENST00000560402 LLGL2Q6P1M3 1020 aa15.15■□□□□ 0.02
SMAD3-214ENST00000560402 SYCE2Q6PIF2 218 aa15.15■□□□□ 0.02
SMAD3-214ENST00000560402 SRGAP1Q7Z6B7 1085 aa15.15■□□□□ 0.02
SMAD3-214ENST00000560402 SLFN12Q8IYM2 578 aa15.15■□□□□ 0.02
SMAD3-214ENST00000560402 TCP11Q8WWU5 503 aa15.15■□□□□ 0.02
SMAD3-214ENST00000560402 RPGRIP1Q96KN7 1286 aa15.15■□□□□ 0.02
SMAD3-214ENST00000560402 CEP170P1Q96L14 293 aa15.15■□□□□ 0.02
SMAD3-214ENST00000560402 SH2D3AQ9BRG2 576 aa15.15■□□□□ 0.02
SMAD3-214ENST00000560402 LXNQ9BS40 222 aa15.15■□□□□ 0.02
SMAD3-214ENST00000560402 ZBP1Q9H171 429 aa15.15■□□□□ 0.02
SMAD3-214ENST00000560402 FOXD4L1Q9NU39 408 aa15.15■□□□□ 0.02
SMAD3-214ENST00000560402 NR2E1Q9Y466 385 aa15.15■□□□□ 0.02
SMAD3-214ENST00000560402 MARCH6O60337 910 aa15.14■□□□□ 0.01
SMAD3-214ENST00000560402 PDIA4P13667 645 aaKnown RBP15.14■□□□□ 0.01
SMAD3-214ENST00000560402 NHLH1Q02575 133 aa15.14■□□□□ 0.01
SMAD3-214ENST00000560402 RNASELQ05823 741 aaKnown RBP15.14■□□□□ 0.01
SMAD3-214ENST00000560402 SIGLEC14Q08ET2 396 aa15.14■□□□□ 0.01
SMAD3-214ENST00000560402 PCBP1Q15365 356 aaKnown RBP eCLIP15.14■□□□□ 0.01
SMAD3-214ENST00000560402 EPHA7Q15375 998 aa15.14■□□□□ 0.01
SMAD3-214ENST00000560402 PTPN21Q16825 1174 aa15.14■□□□□ 0.01
SMAD3-214ENST00000560402 OTUD6AQ7L8S5 288 aa15.14■□□□□ 0.01
SMAD3-214ENST00000560402 SUGP1Q8IWZ8 645 aaKnown RBP15.14■□□□□ 0.01
SMAD3-214ENST00000560402 URGCPQ8TCY9 931 aa15.14■□□□□ 0.01
SMAD3-214ENST00000560402 FBXL18Q96ME1 805 aa15.14■□□□□ 0.01
SMAD3-214ENST00000560402 LARP6Q9BRS8 491 aaKnown RBP15.14■□□□□ 0.01
SMAD3-214ENST00000560402 IFT122Q9HBG6 1241 aa15.14■□□□□ 0.01
SMAD3-214ENST00000560402 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.13■□□□□ 0.01
SMAD3-214ENST00000560402 ASAP2O43150 1006 aa15.13■□□□□ 0.01
SMAD3-214ENST00000560402 CLASP2O75122 1294 aaKnown RBP15.13■□□□□ 0.01
SMAD3-214ENST00000560402 BAG4O95429 457 aaKnown RBP15.13■□□□□ 0.01
SMAD3-214ENST00000560402 CTSAP10619 480 aa15.13■□□□□ 0.01
SMAD3-214ENST00000560402 MTHFRP42898 656 aa15.13■□□□□ 0.01
SMAD3-214ENST00000560402 PIK3AP1Q6ZUJ8 805 aa15.13■□□□□ 0.01
SMAD3-214ENST00000560402 DDX53Q86TM3 631 aaKnown RBP15.13■□□□□ 0.01
SMAD3-214ENST00000560402 POTEDQ86YR6 584 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms