RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 PIGOQ8TEQ8 1089 aa16.9■□□□□ 0.3
SNRPA1-210ENST00000560383 POF1BQ8WVV4 589 aa16.9■□□□□ 0.3
SNRPA1-210ENST00000560383 KHSRPQ92945 711 aaKnown RBP eCLIP16.9■□□□□ 0.37e-7■■■□□ 16
SNRPA1-210ENST00000560383 INTS4Q96HW7 963 aaKnown RBP16.9■□□□□ 0.3
SNRPA1-210ENST00000560383 NACC1Q96RE7 527 aa16.9■□□□□ 0.3
SNRPA1-210ENST00000560383 MTRQ99707 1265 aa16.9■□□□□ 0.3
SNRPA1-210ENST00000560383 TRAIPQ9BWF2 469 aa16.9■□□□□ 0.3
SNRPA1-210ENST00000560383 ATP6V0A4Q9HBG4 840 aa16.9■□□□□ 0.3
SNRPA1-210ENST00000560383 CHST12Q9NRB3 414 aa16.9■□□□□ 0.3
SNRPA1-210ENST00000560383 TRIOO75962 3097 aa16.9■□□□□ 0.3
SNRPA1-210ENST00000560383 TBKBP1A7MCY6 615 aa16.89■□□□□ 0.29
SNRPA1-210ENST00000560383 TBX10O75333 385 aa16.89■□□□□ 0.29
SNRPA1-210ENST00000560383 CSDE1O75534 798 aaKnown RBP16.89■□□□□ 0.29
SNRPA1-210ENST00000560383 ZSCAN20P17040 1043 aaPredicted RBP16.89■□□□□ 0.29
SNRPA1-210ENST00000560383 SFPQP23246 707 aaKnown RBP eCLIP16.89■□□□□ 0.29
SNRPA1-210ENST00000560383 ARL2P36404 184 aa16.89■□□□□ 0.29
SNRPA1-210ENST00000560383 ZP2Q05996 745 aa16.89■□□□□ 0.29
SNRPA1-210ENST00000560383 POU5F1BQ06416 359 aa16.89■□□□□ 0.29
SNRPA1-210ENST00000560383 LAMTOR4Q0VGL1 99 aa16.89■□□□□ 0.29
SNRPA1-210ENST00000560383 SMAD2Q15796 467 aaKnown RBP16.89■□□□□ 0.29
SNRPA1-210ENST00000560383 TMEM31Q5JXX7 168 aa16.89■□□□□ 0.29
SNRPA1-210ENST00000560383 HAUS3Q68CZ6 603 aa16.89■□□□□ 0.29
SNRPA1-210ENST00000560383 SRGAP1Q7Z6B7 1085 aa16.89■□□□□ 0.29
SNRPA1-210ENST00000560383 ADHFE1Q8IWW8 467 aa16.89■□□□□ 0.29
SNRPA1-210ENST00000560383 EFHBQ8N7U6 833 aa16.89■□□□□ 0.29
SNRPA1-210ENST00000560383 NLRP4Q96MN2 994 aa16.89■□□□□ 0.29
SNRPA1-210ENST00000560383 TMEM117Q9H0C3 514 aa16.89■□□□□ 0.29
SNRPA1-210ENST00000560383 LRWD1Q9UFC0 647 aa16.89■□□□□ 0.29
SNRPA1-210ENST00000560383 ARIH1Q9Y4X5 557 aaPredicted RBP16.89■□□□□ 0.29
SNRPA1-210ENST00000560383 STK24Q9Y6E0 443 aa16.89■□□□□ 0.29
SNRPA1-210ENST00000560383 A0A0U1RQF3 1178 aa16.88■□□□□ 0.29
SNRPA1-210ENST00000560383 LAG3P18627 525 aa16.88■□□□□ 0.29
SNRPA1-210ENST00000560383 PDCP20941 246 aa16.88■□□□□ 0.29
SNRPA1-210ENST00000560383 FGFR4P22455 802 aa16.88■□□□□ 0.29
SNRPA1-210ENST00000560383 SSTR3P32745 418 aaPredicted RBP16.88■□□□□ 0.29
SNRPA1-210ENST00000560383 ATP2C1P98194 919 aaPredicted RBP16.88■□□□□ 0.29
SNRPA1-210ENST00000560383 ADAM15Q13444 863 aa16.88■□□□□ 0.29
SNRPA1-210ENST00000560383 SMAD4Q13485 552 aaKnown RBP16.88■□□□□ 0.29
SNRPA1-210ENST00000560383 MXD4Q14582 209 aaPredicted RBP16.88■□□□□ 0.29
SNRPA1-210ENST00000560383 IL17AQ16552 155 aa16.88■□□□□ 0.29
SNRPA1-210ENST00000560383 FAM102BQ5T8I3 360 aa16.88■□□□□ 0.29
SNRPA1-210ENST00000560383 PDE12Q6L8Q7 609 aaKnown RBP16.88■□□□□ 0.29
SNRPA1-210ENST00000560383 IFNLR1Q8IU57 520 aaPredicted RBP16.88■□□□□ 0.29
SNRPA1-210ENST00000560383 COLGALT1Q8NBJ5 622 aa16.88■□□□□ 0.29
SNRPA1-210ENST00000560383 RSPH1Q8WYR4 309 aa16.88■□□□□ 0.29
SNRPA1-210ENST00000560383 SNX21Q969T3 373 aa16.88■□□□□ 0.29
SNRPA1-210ENST00000560383 POP1Q99575 1024 aaKnown RBP16.88■□□□□ 0.29
SNRPA1-210ENST00000560383 LRFN3Q9BTN0 628 aa16.88■□□□□ 0.29
SNRPA1-210ENST00000560383 RAB34Q9BZG1 259 aa16.88■□□□□ 0.29
SNRPA1-210ENST00000560383 DACT1Q9NYF0 836 aa16.88■□□□□ 0.29
SNRPA1-210ENST00000560383 LZTS1Q9Y250 596 aa16.88■□□□□ 0.29
SNRPA1-210ENST00000560383 A0A087WWV3 80 aa16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 C19orf67A6NJJ6 358 aa16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 K7ELQ4 463 aaPredicted RBP16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 MBTPS2O43462 519 aa16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 EYA4O95677 639 aa16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 FGFR1P11362 822 aa16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 ALADP13716 330 aa16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 GTF2F1P35269 517 aaKnown RBP eCLIP16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 IRS1P35568 1242 aa16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 PTENP60484 403 aa16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 DLX2Q07687 328 aaPredicted RBP16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 PCBP1Q15365 356 aaKnown RBP eCLIP16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 SPOUT1Q5T280 376 aaKnown RBP16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 POTEGQ6S5H5 508 aa16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 DTHD1Q6ZMT9 781 aa16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 BRAPQ7Z569 592 aa16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 ADGRD2Q7Z7M1 963 aa16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 ZNF598Q86UK7 904 aaKnown RBP16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 ECHDC2Q86YB7 292 aa16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 LRRC43Q8N309 656 aa16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 MSLNLQ96KJ4 702 aa16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 CCDC43Q96MW1 224 aaKnown RBP16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 NFKBIZQ9BYH8 718 aa16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 CWH43Q9H720 699 aa16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 C11orf16Q9NQ32 467 aa16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 TLR9Q9NR96 1032 aa16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 BMP2KQ9NSY1 1161 aaPredicted RBP16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 RNF19AQ9NV58 838 aa16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 TYW1Q9NV66 732 aaKnown RBP16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 CD207Q9UJ71 328 aa16.87■□□□□ 0.29
SNRPA1-210ENST00000560383 LINC01565O15544 149 aa16.86■□□□□ 0.29
SNRPA1-210ENST00000560383 FGF18O76093 207 aa16.86■□□□□ 0.29
SNRPA1-210ENST00000560383 EOMESO95936 686 aa16.86■□□□□ 0.29
SNRPA1-210ENST00000560383 SRGAP2CP0DJJ0 459 aa16.86■□□□□ 0.29
SNRPA1-210ENST00000560383 ATF7P17544 494 aaPredicted RBP16.86■□□□□ 0.29
SNRPA1-210ENST00000560383 IBSPP21815 317 aaPredicted RBP16.86■□□□□ 0.29
SNRPA1-210ENST00000560383 PPM1AP35813 382 aa16.86■□□□□ 0.29
SNRPA1-210ENST00000560383 NDUFV1P49821 464 aa16.86■□□□□ 0.29
SNRPA1-210ENST00000560383 PLCB3Q01970 1234 aa16.86■□□□□ 0.29
SNRPA1-210ENST00000560383 ECM1Q16610 540 aa16.86■□□□□ 0.29
SNRPA1-210ENST00000560383 ARL6IP4Q66PJ3 421 aaKnown RBP16.86■□□□□ 0.29
SNRPA1-210ENST00000560383 CATSPER4Q7RTX7 472 aa16.86■□□□□ 0.29
SNRPA1-210ENST00000560383 ABI1Q8IZP0 508 aa16.86■□□□□ 0.29
SNRPA1-210ENST00000560383 RNF149Q8NC42 400 aa16.86■□□□□ 0.29
SNRPA1-210ENST00000560383 MCPH1Q8NEM0 835 aa16.86■□□□□ 0.29
SNRPA1-210ENST00000560383 CDCA3Q99618 268 aaPredicted RBP16.86■□□□□ 0.29
SNRPA1-210ENST00000560383 MINDY3Q9H8M7 445 aa16.86■□□□□ 0.29
SNRPA1-210ENST00000560383 AGPAT5Q9NUQ2 364 aa16.86■□□□□ 0.29
SNRPA1-210ENST00000560383 ARID2Q68CP9 1835 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms