RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 MYBP10242 640 aa18.74■□□□□ 0.59
HERC1-207ENST00000560316 GBP2P32456 591 aaPredicted RBP18.74■□□□□ 0.59
HERC1-207ENST00000560316 SETQ01105 290 aaPredicted RBP18.74■□□□□ 0.59
HERC1-207ENST00000560316 TBC1D8BQ0IIM8 1120 aa18.74■□□□□ 0.59
HERC1-207ENST00000560316 PUM1Q14671 1186 aaKnown RBP eCLIP18.74■□□□□ 0.59
HERC1-207ENST00000560316 UGCGQ16739 394 aa18.74■□□□□ 0.59
HERC1-207ENST00000560316 RTN1Q16799 776 aa18.74■□□□□ 0.59
HERC1-207ENST00000560316 PRR16Q569H4 304 aa18.74■□□□□ 0.59
HERC1-207ENST00000560316 C15orf39Q6ZRI6 1047 aa18.74■□□□□ 0.59
HERC1-207ENST00000560316 DCLK2Q8N568 766 aa18.74■□□□□ 0.59
HERC1-207ENST00000560316 ZNF713Q8N859 430 aaPredicted RBP18.74■□□□□ 0.59
HERC1-207ENST00000560316 LSG1Q9H089 658 aaKnown RBP18.74■□□□□ 0.59
HERC1-207ENST00000560316 CACNA1BQ00975 2339 aa18.73■□□□□ 0.59
HERC1-207ENST00000560316 A0A087WZ62 844 aa18.73■□□□□ 0.59
HERC1-207ENST00000560316 CARNS1A5YM72 827 aa18.73■□□□□ 0.59
HERC1-207ENST00000560316 WDR64B1ANS9 1081 aa18.73■□□□□ 0.59
HERC1-207ENST00000560316 LILRB3O75022 631 aa18.73■□□□□ 0.59
HERC1-207ENST00000560316 CREB3L3Q68CJ9 461 aa18.73■□□□□ 0.59
HERC1-207ENST00000560316 SLC44A3Q8N4M1 653 aa18.73■□□□□ 0.59
HERC1-207ENST00000560316 FDXACB1Q9BRP7 624 aaPredicted RBP18.73■□□□□ 0.59
HERC1-207ENST00000560316 TRAIPQ9BWF2 469 aa18.73■□□□□ 0.59
HERC1-207ENST00000560316 MAN1C1Q9NR34 630 aa18.73■□□□□ 0.59
HERC1-207ENST00000560316 DISC1Q9NRI5 854 aa18.73■□□□□ 0.59
HERC1-207ENST00000560316 FAM105AQ9NUU6 356 aa18.73■□□□□ 0.59
HERC1-207ENST00000560316 BRPF3Q9ULD4 1205 aa18.73■□□□□ 0.59
HERC1-207ENST00000560316 PIN4Q9Y237 131 aaKnown RBP18.73■□□□□ 0.59
HERC1-207ENST00000560316 CEP250Q9BV73 2442 aa18.73■□□□□ 0.59
HERC1-207ENST00000560316 OTOGLQ3ZCN5 2332 aa18.72■□□□□ 0.59
HERC1-207ENST00000560316 CCDC195A0A1B0GUA6 201 aa18.72■□□□□ 0.59
HERC1-207ENST00000560316 C2CD2LO14523 706 aa18.72■□□□□ 0.59
HERC1-207ENST00000560316 KRT37O76014 449 aa18.72■□□□□ 0.59
HERC1-207ENST00000560316 DDHD2O94830 711 aa18.72■□□□□ 0.59
HERC1-207ENST00000560316 SP9P0CG40 484 aa18.72■□□□□ 0.59
HERC1-207ENST00000560316 RSPH1Q8WYR4 309 aa18.72■□□□□ 0.59
HERC1-207ENST00000560316 TCEANC2Q96MN5 208 aa18.72■□□□□ 0.59
HERC1-207ENST00000560316 MYADMQ96S97 322 aa18.72■□□□□ 0.59
HERC1-207ENST00000560316 WDR6Q9NNW5 1121 aaKnown RBP18.72■□□□□ 0.59
HERC1-207ENST00000560316 WDR81Q562E7 1941 aa18.72■□□□□ 0.59
HERC1-207ENST00000560316 ZBTB43O43298 467 aa18.71■□□□□ 0.59
HERC1-207ENST00000560316 CHMP2AO43633 222 aa18.71■□□□□ 0.59
HERC1-207ENST00000560316 SRFP11831 508 aa18.71■□□□□ 0.59
HERC1-207ENST00000560316 SKIP12755 728 aa18.71■□□□□ 0.59
HERC1-207ENST00000560316 SFPQP23246 707 aaKnown RBP eCLIP18.71■□□□□ 0.59
HERC1-207ENST00000560316 AFF1P51825 1210 aaKnown RBP18.71■□□□□ 0.59
HERC1-207ENST00000560316 NONOQ15233 471 aaKnown RBP eCLIP18.71■□□□□ 0.592e-6■■■□□ 15.3
HERC1-207ENST00000560316 ZC3H14Q6PJT7 736 aaKnown RBP18.71■□□□□ 0.59
HERC1-207ENST00000560316 CMASQ8NFW8 434 aaPredicted RBP18.71■□□□□ 0.59
HERC1-207ENST00000560316 GPR152Q8TDT2 470 aa18.71■□□□□ 0.59
HERC1-207ENST00000560316 RUBCNQ92622 972 aa18.71■□□□□ 0.59
HERC1-207ENST00000560316 LENG9Q96B70 501 aa18.71■□□□□ 0.59
HERC1-207ENST00000560316 CNTNAP3BQ96NU0 1288 aa18.71■□□□□ 0.59
HERC1-207ENST00000560316 SH2D3AQ9BRG2 576 aa18.71■□□□□ 0.59
HERC1-207ENST00000560316 CNTNAP3Q9BZ76 1288 aa18.71■□□□□ 0.59
HERC1-207ENST00000560316 MRPL17Q9NRX2 175 aaKnown RBP18.71■□□□□ 0.59
HERC1-207ENST00000560316 FAM217BQ9NTX9 383 aaPredicted RBP18.71■□□□□ 0.59
HERC1-207ENST00000560316 DLL3Q9NYJ7 618 aa18.71■□□□□ 0.59
HERC1-207ENST00000560316 DLGAP2Q9P1A6 1054 aa18.71■□□□□ 0.59
HERC1-207ENST00000560316 EPS15L1Q9UBC2 864 aa18.71■□□□□ 0.59
HERC1-207ENST00000560316 CLUHO75153 1309 aa18.71■□□□□ 0.59
HERC1-207ENST00000560316 TMEM150BA6NC51 233 aa18.7■□□□□ 0.58
HERC1-207ENST00000560316 CDC27P30260 824 aa18.7■□□□□ 0.58
HERC1-207ENST00000560316 AK2P54819 239 aa18.7■□□□□ 0.58
HERC1-207ENST00000560316 TARBP2Q15633 366 aaKnown RBP18.7■□□□□ 0.58
HERC1-207ENST00000560316 MTERF2Q49AM1 385 aa18.7■□□□□ 0.58
HERC1-207ENST00000560316 C1orf210Q8IVY1 113 aa18.7■□□□□ 0.58
HERC1-207ENST00000560316 ST13P5Q8NFI4 369 aaPredicted RBP18.7■□□□□ 0.58
HERC1-207ENST00000560316 STAMQ92783 540 aa18.7■□□□□ 0.58
HERC1-207ENST00000560316 SIT1Q9Y3P8 196 aa18.7■□□□□ 0.58
HERC1-207ENST00000560316 GOLGA8AA7E2F4 631 aa18.69■□□□□ 0.58
HERC1-207ENST00000560316 GOLGA8BA8MQT2 603 aa18.69■□□□□ 0.58
HERC1-207ENST00000560316 INPPL1O15357 1258 aa18.69■□□□□ 0.58
HERC1-207ENST00000560316 ZNF623O75123 536 aa18.69■□□□□ 0.58
HERC1-207ENST00000560316 RFPL2O75678 378 aa18.69■□□□□ 0.58
HERC1-207ENST00000560316 CIITAP33076 1130 aa18.69■□□□□ 0.58
HERC1-207ENST00000560316 NECTIN1Q15223 517 aa18.69■□□□□ 0.58
HERC1-207ENST00000560316 PFKFB3Q16875 520 aaPredicted RBP18.69■□□□□ 0.58
HERC1-207ENST00000560316 RSPO4Q2I0M5 234 aaPredicted RBP18.69■□□□□ 0.58
HERC1-207ENST00000560316 PHLDB3Q6NSJ2 640 aa18.69■□□□□ 0.58
HERC1-207ENST00000560316 AGMOQ6ZNB7 445 aa18.69■□□□□ 0.58
HERC1-207ENST00000560316 TAS1R1Q7RTX1 841 aa18.69■□□□□ 0.58
HERC1-207ENST00000560316 CATSPER4Q7RTX7 472 aa18.69■□□□□ 0.58
HERC1-207ENST00000560316 RHPN2Q8IUC4 686 aa18.69■□□□□ 0.58
HERC1-207ENST00000560316 KSR1Q8IVT5 923 aa18.69■□□□□ 0.58
HERC1-207ENST00000560316 REXO1Q8N1G1 1221 aaKnown RBP18.69■□□□□ 0.58
HERC1-207ENST00000560316 URGCPQ8TCY9 931 aa18.69■□□□□ 0.58
HERC1-207ENST00000560316 GJA10Q969M2 543 aa18.69■□□□□ 0.58
HERC1-207ENST00000560316 ARHGEF3Q9NR81 526 aa18.69■□□□□ 0.58
HERC1-207ENST00000560316 SEPT9Q9UHD8 586 aaPredicted RBP18.69■□□□□ 0.58
HERC1-207ENST00000560316 FAN1Q9Y2M0 1017 aa18.69■□□□□ 0.58
HERC1-207ENST00000560316 PCDHB2Q9Y5E7 798 aa18.69■□□□□ 0.58
HERC1-207ENST00000560316 EPG5Q9HCE0 2579 aa18.69■□□□□ 0.58
HERC1-207ENST00000560316 POTEMA6NI47 508 aa18.68■□□□□ 0.58
HERC1-207ENST00000560316 NRP1O14786 923 aa18.68■□□□□ 0.58
HERC1-207ENST00000560316 MSH4O15457 936 aa18.68■□□□□ 0.58
HERC1-207ENST00000560316 TEX28O15482 410 aa18.68■□□□□ 0.58
HERC1-207ENST00000560316 ALDH2P05091 517 aa18.68■□□□□ 0.58
HERC1-207ENST00000560316 GLULP15104 373 aa18.68■□□□□ 0.58
HERC1-207ENST00000560316 RAB27AP51159 221 aa18.68■□□□□ 0.58
HERC1-207ENST00000560316 CDC42EP1Q00587 391 aa18.68■□□□□ 0.58
HERC1-207ENST00000560316 POTEGQ6S5H5 508 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms