RNA–Protein interactions for RNA: ENST00000560220.5

KNSTRN-209, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 5

Gene KNSTRN, Length 903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-209ENST00000560220 SCG2P13521 617 aa11.72□□□□□ -0.53
KNSTRN-209ENST00000560220 THPOP40225 353 aa11.72□□□□□ -0.53
KNSTRN-209ENST00000560220 ZNF252P-AS1Q0IIN9 211 aa11.72□□□□□ -0.53
KNSTRN-209ENST00000560220 PFKFB3Q16875 520 aaPredicted RBP11.72□□□□□ -0.53
KNSTRN-209ENST00000560220 DPCR1Q3MIW9 517 aa11.72□□□□□ -0.53
KNSTRN-209ENST00000560220 ATAT1Q5SQI0 421 aa11.72□□□□□ -0.53
KNSTRN-209ENST00000560220 PDE12Q6L8Q7 609 aaKnown RBP11.72□□□□□ -0.53
KNSTRN-209ENST00000560220 LRRC8AQ8IWT6 810 aa11.72□□□□□ -0.53
KNSTRN-209ENST00000560220 CCDC82Q8N4S0 544 aa11.72□□□□□ -0.53
KNSTRN-209ENST00000560220 CELF5Q8N6W0 485 aaKnown RBP11.72□□□□□ -0.53
KNSTRN-209ENST00000560220 CACTINQ8WUQ7 758 aaKnown RBP11.72□□□□□ -0.53
KNSTRN-209ENST00000560220 CEP95Q96GE4 821 aa11.72□□□□□ -0.53
KNSTRN-209ENST00000560220 FOXQ1Q9C009 403 aa11.72□□□□□ -0.53
KNSTRN-209ENST00000560220 KANSL2Q9H9L4 492 aa11.72□□□□□ -0.53
KNSTRN-209ENST00000560220 MTMR4Q9NYA4 1195 aa11.72□□□□□ -0.53
KNSTRN-209ENST00000560220 FAM13BQ9NYF5 915 aa11.72□□□□□ -0.53
KNSTRN-209ENST00000560220 IGSF9Q9P2J2 1179 aa11.72□□□□□ -0.53
KNSTRN-209ENST00000560220 HDAC6Q9UBN7 1215 aa11.72□□□□□ -0.53
KNSTRN-209ENST00000560220 SEC63Q9UGP8 760 aaKnown RBP11.72□□□□□ -0.53
KNSTRN-209ENST00000560220 KCNH3Q9ULD8 1083 aa11.72□□□□□ -0.53
KNSTRN-209ENST00000560220 SYNPO2Q9UMS6 1093 aa11.72□□□□□ -0.53
KNSTRN-209ENST00000560220 MYO18BQ8IUG5 2567 aa11.72□□□□□ -0.53
KNSTRN-209ENST00000560220 AKAP13Q12802 2813 aa11.71□□□□□ -0.53
KNSTRN-209ENST00000560220 RALGAPA1Q6GYQ0 2036 aa11.71□□□□□ -0.53
KNSTRN-209ENST00000560220 MYH6P13533 1939 aa11.71□□□□□ -0.53
KNSTRN-209ENST00000560220 PALM3A6NDB9 673 aaPredicted RBP11.71□□□□□ -0.53
KNSTRN-209ENST00000560220 BTBD18B2RXH4 712 aa11.71□□□□□ -0.53
KNSTRN-209ENST00000560220 TOB1P50616 345 aaPredicted RBP11.71□□□□□ -0.53
KNSTRN-209ENST00000560220 NOVA1P51513 510 aaKnown RBP11.71□□□□□ -0.53
KNSTRN-209ENST00000560220 NLRP5P59047 1200 aa11.71□□□□□ -0.53
KNSTRN-209ENST00000560220 ERVFC1P60507 584 aa11.71□□□□□ -0.53
KNSTRN-209ENST00000560220 ICA1Q05084 483 aa11.71□□□□□ -0.53
KNSTRN-209ENST00000560220 UBE3AQ05086 875 aa11.71□□□□□ -0.53
KNSTRN-209ENST00000560220 LRMPQ12912 555 aa11.71□□□□□ -0.53
KNSTRN-209ENST00000560220 GPATCH4Q5T3I0 446 aaKnown RBP11.71□□□□□ -0.53
KNSTRN-209ENST00000560220 TSSK4Q6SA08 328 aa11.71□□□□□ -0.53
KNSTRN-209ENST00000560220 KRBA2Q6ZNG9 492 aa11.71□□□□□ -0.53
KNSTRN-209ENST00000560220 CLEC10AQ8IUN9 316 aa11.71□□□□□ -0.53
KNSTRN-209ENST00000560220 APBB2Q92870 758 aa11.71□□□□□ -0.53
KNSTRN-209ENST00000560220 RRP36Q96EU6 259 aaKnown RBP11.71□□□□□ -0.53
KNSTRN-209ENST00000560220 LRIG1Q96JA1 1093 aa11.71□□□□□ -0.53
KNSTRN-209ENST00000560220 SPZ1Q9BXG8 430 aa11.71□□□□□ -0.53
KNSTRN-209ENST00000560220 PDCL3Q9H2J4 239 aa11.71□□□□□ -0.53
KNSTRN-209ENST00000560220 CLMPQ9H6B4 373 aa11.71□□□□□ -0.53
KNSTRN-209ENST00000560220 HOMER2Q9NSB8 354 aa11.71□□□□□ -0.53
KNSTRN-209ENST00000560220 SRPK3Q9UPE1 567 aa11.71□□□□□ -0.53
KNSTRN-209ENST00000560220 PLXNA4Q9HCM2 1894 aa11.71□□□□□ -0.53
KNSTRN-209ENST00000560220 TICRRQ7Z2Z1 1910 aa11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 CNTNAP5Q8WYK1 1306 aa11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 KLRF2D3W0D1 207 aa11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 C1QL1O75973 258 aa11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 PLEKHA8P1O95397 391 aa11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 FUT2Q10981 343 aa11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 NONOQ15233 471 aaKnown RBP eCLIP11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 STPG1Q5TH74 334 aa11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 KIAA1841Q6NSI8 718 aa11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 KANK3Q6NY19 840 aa11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 OTOP3Q7RTS5 596 aa11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 SRBD1Q8N5C6 995 aaKnown RBP11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 C12orf50Q8NA57 414 aaPredicted RBP11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 PRPF38AQ8NAV1 312 aaKnown RBP11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 HNRNPLLQ8WVV9 542 aaKnown RBP11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 ERCC4Q92889 916 aaPredicted RBP11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 CCDC34Q96HJ3 373 aa11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 CLIC6Q96NY7 704 aa11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 PURBQ96QR8 312 aaKnown RBP11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 PHF20Q9BVI0 1012 aa11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 FAM126AQ9BYI3 521 aaPredicted RBP11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 ARHGEF3Q9NR81 526 aa11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 KCND1Q9NSA2 647 aa11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 NYAP2Q9P242 653 aa11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 MAD2L2Q9UI95 211 aa11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 FBXO2Q9UK22 296 aaPredicted RBP11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 KCNJ14Q9UNX9 436 aa11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 KIAA1671Q9BY89 1806 aa11.7□□□□□ -0.54
KNSTRN-209ENST00000560220 A0A087WWV3 80 aa11.69□□□□□ -0.54
KNSTRN-209ENST00000560220 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.69□□□□□ -0.54
KNSTRN-209ENST00000560220 IGKV6D-41A0A0C4DH26 115 aa11.69□□□□□ -0.54
KNSTRN-209ENST00000560220 BIN1O00499 593 aa11.69□□□□□ -0.54
KNSTRN-209ENST00000560220 NKRFO15226 690 aaKnown RBP eCLIP11.69□□□□□ -0.54
KNSTRN-209ENST00000560220 DGKIO75912 1065 aa11.69□□□□□ -0.54
KNSTRN-209ENST00000560220 GNA11P29992 359 aa11.69□□□□□ -0.54
KNSTRN-209ENST00000560220 TRAPPC10P48553 1259 aa11.69□□□□□ -0.54
KNSTRN-209ENST00000560220 TRAF1Q13077 416 aa11.69□□□□□ -0.54
KNSTRN-209ENST00000560220 NCAPHQ15003 741 aa11.69□□□□□ -0.54
KNSTRN-209ENST00000560220 LONRF3Q496Y0 759 aa11.69□□□□□ -0.54
KNSTRN-209ENST00000560220 RARS2Q5T160 578 aaKnown RBP11.69□□□□□ -0.54
KNSTRN-209ENST00000560220 DCLRE1AQ6PJP8 1040 aa11.69□□□□□ -0.54
KNSTRN-209ENST00000560220 CCDC150Q8NCX0 1101 aa11.69□□□□□ -0.54
KNSTRN-209ENST00000560220 CNNM3Q8NE01 707 aa11.69□□□□□ -0.54
KNSTRN-209ENST00000560220 GPR20Q99678 358 aa11.69□□□□□ -0.54
KNSTRN-209ENST00000560220 ACAD9Q9H845 621 aa11.69□□□□□ -0.54
KNSTRN-209ENST00000560220 GOPCQ9HD26 462 aa11.69□□□□□ -0.54
KNSTRN-209ENST00000560220 A1CFQ9NQ94 594 aaKnown RBP11.69□□□□□ -0.54
KNSTRN-209ENST00000560220 SRPRBQ9Y5M8 271 aaKnown RBP11.69□□□□□ -0.54
KNSTRN-209ENST00000560220 PATJQ8NI35 1801 aa11.69□□□□□ -0.54
KNSTRN-209ENST00000560220 PIEZO2Q9H5I5 2752 aa11.68□□□□□ -0.54
KNSTRN-209ENST00000560220 ANKRD17O75179 2603 aaKnown RBP11.68□□□□□ -0.54
KNSTRN-209ENST00000560220 RBM47A0AV96 593 aaKnown RBP11.68□□□□□ -0.54
KNSTRN-209ENST00000560220 TK2O00142 265 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms