RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 EP300Q09472 2414 aaPredicted RBP23■■□□□ 1.27
PSEN1-225ENST00000560005 DMXL1Q9Y485 3027 aa23■■□□□ 1.27
PSEN1-225ENST00000560005 ATP4AP20648 1035 aa22.99■■□□□ 1.27
PSEN1-225ENST00000560005 FOSBP53539 338 aa22.99■■□□□ 1.27
PSEN1-225ENST00000560005 GUCY1B3Q02153 619 aa22.99■■□□□ 1.27
PSEN1-225ENST00000560005 DNM1Q05193 864 aaKnown RBP22.99■■□□□ 1.27
PSEN1-225ENST00000560005 KIAA1841Q6NSI8 718 aa22.99■■□□□ 1.27
PSEN1-225ENST00000560005 FOXP1Q9H334 677 aaPredicted RBP22.99■■□□□ 1.27
PSEN1-225ENST00000560005 DNAH14Q0VDD8 3507 aa22.99■■□□□ 1.27
PSEN1-225ENST00000560005 MEIS1O00470 390 aa22.98■■□□□ 1.27
PSEN1-225ENST00000560005 PRPF40AO75400 957 aaKnown RBP22.98■■□□□ 1.27
PSEN1-225ENST00000560005 U2AF2P26368 475 aaKnown RBP eCLIP22.98■■□□□ 1.27
PSEN1-225ENST00000560005 CLLU1OSQ5K130 101 aa22.98■■□□□ 1.27
PSEN1-225ENST00000560005 ATAT1Q5SQI0 421 aa22.98■■□□□ 1.27
PSEN1-225ENST00000560005 GALNT17Q6IS24 598 aa22.98■■□□□ 1.27
PSEN1-225ENST00000560005 SWSAP1Q6NVH7 229 aa22.98■■□□□ 1.27
PSEN1-225ENST00000560005 ECHDC2Q86YB7 292 aa22.98■■□□□ 1.27
PSEN1-225ENST00000560005 CKAP2LQ8IYA6 745 aa22.98■■□□□ 1.27
PSEN1-225ENST00000560005 PLCD3Q8N3E9 789 aa22.98■■□□□ 1.27
PSEN1-225ENST00000560005 CCDC148Q8NFR7 591 aa22.98■■□□□ 1.27
PSEN1-225ENST00000560005 LMBRD1Q9NUN5 540 aa22.98■■□□□ 1.27
PSEN1-225ENST00000560005 USTQ9Y2C2 406 aa22.98■■□□□ 1.27
PSEN1-225ENST00000560005 TRAK2O60296 914 aa22.97■■□□□ 1.27
PSEN1-225ENST00000560005 CXCL14O95715 111 aa22.97■■□□□ 1.27
PSEN1-225ENST00000560005 MBD3O95983 291 aa22.97■■□□□ 1.27
PSEN1-225ENST00000560005 ZSCAN20P17040 1043 aaPredicted RBP22.97■■□□□ 1.27
PSEN1-225ENST00000560005 WWC2Q6AWC2 1192 aa22.97■■□□□ 1.27
PSEN1-225ENST00000560005 MIS18BP1Q6P0N0 1132 aa22.97■■□□□ 1.27
PSEN1-225ENST00000560005 TRMT1LQ7Z2T5 733 aaKnown RBP22.97■■□□□ 1.27
PSEN1-225ENST00000560005 AIFM3Q96NN9 605 aa22.97■■□□□ 1.27
PSEN1-225ENST00000560005 ANO3Q9BYT9 981 aa22.97■■□□□ 1.27
PSEN1-225ENST00000560005 DZANK1Q9NVP4 752 aa22.97■■□□□ 1.27
PSEN1-225ENST00000560005 NT5C1B-RDH14C9J2C7 533 aa22.96■■□□□ 1.27
PSEN1-225ENST00000560005 PI15O43692 258 aa22.96■■□□□ 1.27
PSEN1-225ENST00000560005 EOMESO95936 686 aa22.96■■□□□ 1.27
PSEN1-225ENST00000560005 EPCAMP16422 314 aa22.96■■□□□ 1.27
PSEN1-225ENST00000560005 AOC1P19801 751 aa22.96■■□□□ 1.27
PSEN1-225ENST00000560005 CLCN3P51790 818 aa22.96■■□□□ 1.27
PSEN1-225ENST00000560005 FOXD4L6Q3SYB3 417 aaPredicted RBP22.96■■□□□ 1.27
PSEN1-225ENST00000560005 TYW1BQ6NUM6 668 aa22.96■■□□□ 1.27
PSEN1-225ENST00000560005 FOXD4L3Q6VB84 417 aaPredicted RBP22.96■■□□□ 1.27
PSEN1-225ENST00000560005 HELQQ8TDG4 1101 aa22.96■■□□□ 1.27
PSEN1-225ENST00000560005 CYP26B1Q9NR63 512 aa22.96■■□□□ 1.27
PSEN1-225ENST00000560005 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.95■■□□□ 1.26
PSEN1-225ENST00000560005 FOSP01100 380 aaPredicted RBP22.95■■□□□ 1.26
PSEN1-225ENST00000560005 ZNF76P36508 570 aa22.95■■□□□ 1.26
PSEN1-225ENST00000560005 NAPAP54920 295 aa22.95■■□□□ 1.26
PSEN1-225ENST00000560005 NLRP11P59045 1033 aaKnown RBP22.95■■□□□ 1.26
PSEN1-225ENST00000560005 BMS1Q14692 1282 aaKnown RBP22.95■■□□□ 1.26
PSEN1-225ENST00000560005 CCDC105Q8IYK2 499 aa22.95■■□□□ 1.26
PSEN1-225ENST00000560005 FEZF2Q8TBJ5 459 aa22.95■■□□□ 1.26
PSEN1-225ENST00000560005 AUTS2Q8WXX7 1259 aa22.95■■□□□ 1.26
PSEN1-225ENST00000560005 BBXQ8WY36 941 aaPredicted RBP22.95■■□□□ 1.26
PSEN1-225ENST00000560005 TMEM169Q96HH4 297 aa22.95■■□□□ 1.26
PSEN1-225ENST00000560005 PHF20Q9BVI0 1012 aa22.95■■□□□ 1.26
PSEN1-225ENST00000560005 RIC8AQ9NPQ8 531 aa22.95■■□□□ 1.26
PSEN1-225ENST00000560005 AKT3Q9Y243 479 aa22.95■■□□□ 1.26
PSEN1-225ENST00000560005 NPR3P17342 541 aa22.94■■□□□ 1.26
PSEN1-225ENST00000560005 KRT2P35908 639 aa22.94■■□□□ 1.26
PSEN1-225ENST00000560005 ALDH7A1P49419 539 aaKnown RBP22.94■■□□□ 1.26
PSEN1-225ENST00000560005 BCAR1P56945 870 aa22.94■■□□□ 1.26
PSEN1-225ENST00000560005 ANGPT1Q15389 498 aa22.94■■□□□ 1.26
PSEN1-225ENST00000560005 TMC5Q6UXY8 1006 aa22.94■■□□□ 1.26
PSEN1-225ENST00000560005 DIS3L2Q8IYB7 885 aaKnown RBP22.94■■□□□ 1.26
PSEN1-225ENST00000560005 VPS52Q8N1B4 723 aa22.94■■□□□ 1.26
PSEN1-225ENST00000560005 ZNF668Q96K58 619 aaPredicted RBP22.94■■□□□ 1.26
PSEN1-225ENST00000560005 SPATA32Q96LK8 384 aa22.94■■□□□ 1.26
PSEN1-225ENST00000560005 ZBP1Q9H171 429 aa22.94■■□□□ 1.26
PSEN1-225ENST00000560005 FRYLO94915 3013 aa22.93■■□□□ 1.26
PSEN1-225ENST00000560005 DHX15O43143 795 aaKnown RBP22.93■■□□□ 1.26
PSEN1-225ENST00000560005 EIF4BP23588 611 aaKnown RBP22.93■■□□□ 1.26
PSEN1-225ENST00000560005 SREBF1P36956 1147 aa22.93■■□□□ 1.26
PSEN1-225ENST00000560005 ADCY7P51828 1080 aa22.93■■□□□ 1.26
PSEN1-225ENST00000560005 NLRP5P59047 1200 aa22.93■■□□□ 1.26
PSEN1-225ENST00000560005 UBE2HP62256 183 aa22.93■■□□□ 1.26
PSEN1-225ENST00000560005 KLHL40Q2TBA0 621 aa22.93■■□□□ 1.26
PSEN1-225ENST00000560005 ZNF598Q86UK7 904 aaKnown RBP22.93■■□□□ 1.26
PSEN1-225ENST00000560005 TMEM173Q86WV6 379 aaPredicted RBP22.93■■□□□ 1.26
PSEN1-225ENST00000560005 NOSTRINQ8IVI9 506 aa22.93■■□□□ 1.26
PSEN1-225ENST00000560005 MRPL9Q9BYD2 267 aaKnown RBP22.93■■□□□ 1.26
PSEN1-225ENST00000560005 ADAMTS10Q9H324 1103 aa22.93■■□□□ 1.26
PSEN1-225ENST00000560005 MAFBQ9Y5Q3 323 aaPredicted RBP22.93■■□□□ 1.26
PSEN1-225ENST00000560005 DENND4AQ7Z401 1863 aa22.93■■□□□ 1.26
PSEN1-225ENST00000560005 A0A0U1RQF3 1178 aa22.92■■□□□ 1.26
PSEN1-225ENST00000560005 GOLGA6L4A6NEF3 574 aa22.92■■□□□ 1.26
PSEN1-225ENST00000560005 FAM86B1E9PN63 330 aa22.92■■□□□ 1.26
PSEN1-225ENST00000560005 FAM86B2P0C5J1 330 aa22.92■■□□□ 1.26
PSEN1-225ENST00000560005 TDGQ13569 410 aa22.92■■□□□ 1.26
PSEN1-225ENST00000560005 NIPA1Q7RTP0 329 aa22.92■■□□□ 1.26
PSEN1-225ENST00000560005 PLA2G4DQ86XP0 818 aa22.92■■□□□ 1.26
PSEN1-225ENST00000560005 LRRC71Q8N4P6 559 aa22.92■■□□□ 1.26
PSEN1-225ENST00000560005 DTWD2Q8NBA8 298 aa22.92■■□□□ 1.26
PSEN1-225ENST00000560005 SLC22A17Q8WUG5 538 aa22.92■■□□□ 1.26
PSEN1-225ENST00000560005 ACSF2Q96CM8 615 aaPredicted RBP22.92■■□□□ 1.26
PSEN1-225ENST00000560005 MAP7D2Q96T17 732 aa22.92■■□□□ 1.26
PSEN1-225ENST00000560005 BARHL2Q9NY43 387 aa22.92■■□□□ 1.26
PSEN1-225ENST00000560005 VPS54Q9P1Q0 977 aa22.92■■□□□ 1.26
PSEN1-225ENST00000560005 RCOR1Q9UKL0 485 aa22.92■■□□□ 1.26
PSEN1-225ENST00000560005 CEP131Q9UPN4 1083 aa22.92■■□□□ 1.26
PSEN1-225ENST00000560005 MYH9P35579 1960 aaKnown RBP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms