RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 GTF2BQ00403 316 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 STRN3Q13033 797 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 KNOP1Q1ED39 458 aaKnown RBP11.47□□□□□ -0.57
TPM1-221ENST00000559831 BMT2Q1RMZ1 405 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 KIZQ2M2Z5 673 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 CT47A1Q5JQC4 288 aaPredicted RBP11.47□□□□□ -0.57
TPM1-221ENST00000559831 RSPH3Q86UC2 560 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 LUZP1Q86V48 1076 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 SERINC5Q86VE9 423 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 DHX40Q8IX18 779 aaKnown RBP11.47□□□□□ -0.57
TPM1-221ENST00000559831 ANKLE1Q8NAG6 615 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 SLC43A3Q8NBI5 491 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 WNT8BQ93098 351 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 HVCN1Q96D96 273 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 BICD1Q96G01 975 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 BPIFA3Q9BQP9 254 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 FDXACB1Q9BRP7 624 aaPredicted RBP11.47□□□□□ -0.57
TPM1-221ENST00000559831 NTPCRQ9BSD7 190 aaKnown RBP11.47□□□□□ -0.57
TPM1-221ENST00000559831 TRPV6Q9H1D0 765 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 C2orf40Q9H1Z8 148 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 IKZF4Q9H2S9 585 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 SEMA6BQ9H3T3 888 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 ST6GALNAC4Q9H4F1 302 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 ARHGAP28Q9P2N2 729 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 RWDD2AQ9UIY3 292 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 TBX20Q9UMR3 447 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 EXOC7Q9UPT5 735 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 ZMYM2Q9UBW7 1377 aa11.46□□□□□ -0.57
TPM1-221ENST00000559831 BICDL2A1A5D9 508 aa11.46□□□□□ -0.57
TPM1-221ENST00000559831 SMTNL1A8MU46 457 aa11.46□□□□□ -0.57
TPM1-221ENST00000559831 GOLGA6L19H0YKK7 550 aa11.46□□□□□ -0.57
TPM1-221ENST00000559831 INO80B-WBP1J3KQ70 363 aa11.46□□□□□ -0.57
TPM1-221ENST00000559831 K7ERI5 159 aa11.46□□□□□ -0.57
TPM1-221ENST00000559831 M0QZ92 97 aa11.46□□□□□ -0.57
TPM1-221ENST00000559831 CALUO43852 315 aaPredicted RBP11.46□□□□□ -0.57
TPM1-221ENST00000559831 B4GALT4O60513 344 aa11.46□□□□□ -0.57
TPM1-221ENST00000559831 PRKCBP05771 671 aa11.46□□□□□ -0.57
TPM1-221ENST00000559831 ABCD1P33897 745 aa11.46□□□□□ -0.57
TPM1-221ENST00000559831 HOXD13P35453 343 aa11.46□□□□□ -0.57
TPM1-221ENST00000559831 THPOP40225 353 aa11.46□□□□□ -0.57
TPM1-221ENST00000559831 EFNA5P52803 228 aa11.46□□□□□ -0.57
TPM1-221ENST00000559831 PMS1P54277 932 aaKnown RBP11.46□□□□□ -0.57
TPM1-221ENST00000559831 PTENP60484 403 aa11.46□□□□□ -0.57
TPM1-221ENST00000559831 MRPS6P82932 125 aaKnown RBP11.46□□□□□ -0.57
TPM1-221ENST00000559831 MYL5Q02045 173 aa11.46□□□□□ -0.57
TPM1-221ENST00000559831 PTK7Q13308 1070 aa11.46□□□□□ -0.57
TPM1-221ENST00000559831 TMEM132AQ24JP5 1023 aa11.46□□□□□ -0.57
TPM1-221ENST00000559831 CDCA2Q69YH5 1023 aaPredicted RBP11.46□□□□□ -0.57
TPM1-221ENST00000559831 ANKRD40Q6AI12 368 aa11.46□□□□□ -0.57
TPM1-221ENST00000559831 TAS1R3Q7RTX0 852 aa11.46□□□□□ -0.57
TPM1-221ENST00000559831 ZNF410Q86VK4 478 aa11.46□□□□□ -0.57
TPM1-221ENST00000559831 NME8Q8N427 588 aa11.46□□□□□ -0.57
TPM1-221ENST00000559831 OSMRQ99650 979 aa11.46□□□□□ -0.57
TPM1-221ENST00000559831 STRA6Q9BX79 667 aa11.46□□□□□ -0.57
TPM1-221ENST00000559831 GCOM2Q9BZD3 368 aaPredicted RBP11.46□□□□□ -0.57
TPM1-221ENST00000559831 INO80BQ9C086 356 aaPredicted RBP11.46□□□□□ -0.57
TPM1-221ENST00000559831 C11orf49Q9H6J7 331 aa11.46□□□□□ -0.57
TPM1-221ENST00000559831 TMEM134Q9H6X4 195 aa11.46□□□□□ -0.57
TPM1-221ENST00000559831 TMEM206Q9H813 350 aa11.46□□□□□ -0.57
TPM1-221ENST00000559831 GOLGA6L3A6NEY3 463 aa11.45□□□□□ -0.58
TPM1-221ENST00000559831 CLIC2O15247 247 aa11.45□□□□□ -0.58
TPM1-221ENST00000559831 PQBP1O60828 265 aaKnown RBP11.45□□□□□ -0.58
TPM1-221ENST00000559831 GPR32O75388 356 aa11.45□□□□□ -0.58
TPM1-221ENST00000559831 CSDE1O75534 798 aaKnown RBP11.45□□□□□ -0.58
TPM1-221ENST00000559831 CDC42EP1Q00587 391 aa11.45□□□□□ -0.58
TPM1-221ENST00000559831 MBTD1Q05BQ5 628 aa11.45□□□□□ -0.58
TPM1-221ENST00000559831 IQCB1Q15051 598 aa11.45□□□□□ -0.58
TPM1-221ENST00000559831 MAPK6Q16659 721 aa11.45□□□□□ -0.58
TPM1-221ENST00000559831 CENPPQ6IPU0 288 aa11.45□□□□□ -0.58
TPM1-221ENST00000559831 SLC39A5Q6ZMH5 540 aa11.45□□□□□ -0.58
TPM1-221ENST00000559831 HS2ST1Q7LGA3 356 aa11.45□□□□□ -0.58
TPM1-221ENST00000559831 MAP4K3Q8IVH8 894 aa11.45□□□□□ -0.58
TPM1-221ENST00000559831 ENOX1Q8TC92 643 aaKnown RBP11.45□□□□□ -0.58
TPM1-221ENST00000559831 PAWRQ96IZ0 340 aaKnown RBP11.45□□□□□ -0.58
TPM1-221ENST00000559831 MED15Q96RN5 788 aa11.45□□□□□ -0.58
TPM1-221ENST00000559831 CTAGE1Q96RT6 745 aa11.45□□□□□ -0.58
TPM1-221ENST00000559831 SEZ6LQ9BYH1 1024 aa11.45□□□□□ -0.58
TPM1-221ENST00000559831 CCDC113Q9H0I3 377 aa11.45□□□□□ -0.58
TPM1-221ENST00000559831 GBP3Q9H0R5 595 aa11.45□□□□□ -0.58
TPM1-221ENST00000559831 ADAMTS10Q9H324 1103 aa11.45□□□□□ -0.58
TPM1-221ENST00000559831 KCTD10Q9H3F6 313 aa11.45□□□□□ -0.58
TPM1-221ENST00000559831 MINDY3Q9H8M7 445 aa11.45□□□□□ -0.58
TPM1-221ENST00000559831 CDHR5Q9HBB8 845 aa11.45□□□□□ -0.58
TPM1-221ENST00000559831 IFT122Q9HBG6 1241 aa11.45□□□□□ -0.58
TPM1-221ENST00000559831 TYW1Q9NV66 732 aaKnown RBP11.45□□□□□ -0.58
TPM1-221ENST00000559831 USP20Q9Y2K6 914 aa11.45□□□□□ -0.58
TPM1-221ENST00000559831 TRPV2Q9Y5S1 764 aa11.45□□□□□ -0.58
TPM1-221ENST00000559831 CDY2AQ9Y6F7 541 aa11.45□□□□□ -0.58
TPM1-221ENST00000559831 CENPFP49454 3210 aa11.45□□□□□ -0.58
TPM1-221ENST00000559831 MROH7Q68CQ1 1323 aa11.44□□□□□ -0.58
TPM1-221ENST00000559831 TISP43B9A030 160 aa11.44□□□□□ -0.58
TPM1-221ENST00000559831 PDXKO00764 312 aa11.44□□□□□ -0.58
TPM1-221ENST00000559831 IKBKBO14920 756 aa11.44□□□□□ -0.58
TPM1-221ENST00000559831 HNRNPDLO14979 420 aaKnown RBP11.44□□□□□ -0.58
TPM1-221ENST00000559831 TLR3O15455 904 aaKnown RBP11.44□□□□□ -0.58
TPM1-221ENST00000559831 TGFB1I1O43294 461 aa11.44□□□□□ -0.58
TPM1-221ENST00000559831 EDN1P05305 212 aa11.44□□□□□ -0.58
TPM1-221ENST00000559831 RPLP2P05387 115 aaKnown RBP11.44□□□□□ -0.58
TPM1-221ENST00000559831 COL6A1P12109 1028 aa11.44□□□□□ -0.58
TPM1-221ENST00000559831 SCP2P22307 547 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms