RNA–Protein interactions for RNA: ENST00000559604.1

KNSTRN-208, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 4

Gene KNSTRN, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-208ENST00000559604 EIF2AK1Q9BQI3 630 aaKnown RBP21.32■■□□□ 1
KNSTRN-208ENST00000559604 TTC12Q9H892 705 aaPredicted RBP21.32■■□□□ 1
KNSTRN-208ENST00000559604 MINDY3Q9H8M7 445 aa21.32■■□□□ 1
KNSTRN-208ENST00000559604 FAM105AQ9NUU6 356 aa21.32■■□□□ 1
KNSTRN-208ENST00000559604 LIMCH1Q9UPQ0 1083 aa21.32■■□□□ 1
KNSTRN-208ENST00000559604 MEIS3P2A8K0S8 358 aa21.31■■□□□ 1
KNSTRN-208ENST00000559604 NEMFO60524 1076 aa21.31■■□□□ 1
KNSTRN-208ENST00000559604 GPR37L1O60883 481 aa21.31■■□□□ 1
KNSTRN-208ENST00000559604 SRGAP2CP0DJJ0 459 aa21.31■■□□□ 1
KNSTRN-208ENST00000559604 LONRF3Q496Y0 759 aa21.31■■□□□ 1
KNSTRN-208ENST00000559604 TMEM31Q5JXX7 168 aa21.31■■□□□ 1
KNSTRN-208ENST00000559604 PLPP4Q5VZY2 271 aa21.31■■□□□ 1
KNSTRN-208ENST00000559604 SLC39A11Q8N1S5 342 aa21.31■■□□□ 1
KNSTRN-208ENST00000559604 SMRP1Q8NCR6 262 aa21.31■■□□□ 1
KNSTRN-208ENST00000559604 MTMR9Q96QG7 549 aa21.31■■□□□ 1
KNSTRN-208ENST00000559604 TCF25Q9BQ70 676 aa21.31■■□□□ 1
KNSTRN-208ENST00000559604 MRPL9Q9BYD2 267 aaKnown RBP21.31■■□□□ 1
KNSTRN-208ENST00000559604 XPNPEP1Q9NQW7 623 aa21.31■■□□□ 1
KNSTRN-208ENST00000559604 AGPAT5Q9NUQ2 364 aa21.31■■□□□ 1
KNSTRN-208ENST00000559604 SPG21Q9NZD8 308 aa21.31■■□□□ 1
KNSTRN-208ENST00000559604 PUF60Q9UHX1 559 aaKnown RBP21.31■■□□□ 1
KNSTRN-208ENST00000559604 FAM86C2PA6NEL3 165 aa21.3■■□□□ 1
KNSTRN-208ENST00000559604 GAS2O43903 313 aaKnown RBP21.3■■□□□ 1
KNSTRN-208ENST00000559604 ZNF623O75123 536 aa21.3■■□□□ 1
KNSTRN-208ENST00000559604 LYPLA2O95372 231 aa21.3■■□□□ 1
KNSTRN-208ENST00000559604 CENPBP07199 599 aaPredicted RBP21.3■■□□□ 1
KNSTRN-208ENST00000559604 SKIP12755 728 aa21.3■■□□□ 1
KNSTRN-208ENST00000559604 TXKP42681 527 aa21.3■■□□□ 1
KNSTRN-208ENST00000559604 GUCY1B3Q02153 619 aa21.3■■□□□ 1
KNSTRN-208ENST00000559604 SRGAP1Q7Z6B7 1085 aa21.3■■□□□ 1
KNSTRN-208ENST00000559604 FERMT3Q86UX7 667 aa21.3■■□□□ 1
KNSTRN-208ENST00000559604 CCDC83Q8IWF9 413 aa21.3■■□□□ 1
KNSTRN-208ENST00000559604 TCP11Q8WWU5 503 aa21.3■■□□□ 1
KNSTRN-208ENST00000559604 CDCA3Q99618 268 aaPredicted RBP21.3■■□□□ 1
KNSTRN-208ENST00000559604 TMEM60Q9H2L4 133 aa21.3■■□□□ 1
KNSTRN-208ENST00000559604 ENTPD7Q9NQZ7 604 aa21.3■■□□□ 1
KNSTRN-208ENST00000559604 HIDE1A8MVS5 230 aa21.29■■□□□ 1
KNSTRN-208ENST00000559604 HOXA11P31270 313 aaPredicted RBP21.29■■□□□ 1
KNSTRN-208ENST00000559604 RAB27AP51159 221 aa21.29■■□□□ 1
KNSTRN-208ENST00000559604 BCAR1P56945 870 aa21.29■■□□□ 1
KNSTRN-208ENST00000559604 KRT17Q04695 432 aa21.29■■□□□ 1
KNSTRN-208ENST00000559604 KIF2CQ99661 725 aa21.29■■□□□ 1
KNSTRN-208ENST00000559604 MTRQ99707 1265 aa21.29■■□□□ 1
KNSTRN-208ENST00000559604 NGRNQ9NPE2 291 aaKnown RBP21.29■■□□□ 1
KNSTRN-208ENST00000559604 NT5C1B-RDH14C9J2C7 533 aa21.28■■□□□ 1
KNSTRN-208ENST00000559604 ASAP2O43150 1006 aa21.28■■□□□ 1
KNSTRN-208ENST00000559604 KCNC3Q14003 757 aa21.28■■□□□ 1
KNSTRN-208ENST00000559604 GLB1LQ6UWU2 654 aa21.28■■□□□ 1
KNSTRN-208ENST00000559604 RNF149Q8NC42 400 aa21.28■■□□□ 1
KNSTRN-208ENST00000559604 RSPH1Q8WYR4 309 aa21.28■■□□□ 1
KNSTRN-208ENST00000559604 LLPHQ9BRT6 129 aaKnown RBP21.28■■□□□ 1
KNSTRN-208ENST00000559604 ANKEF1Q9NU02 776 aa21.28■■□□□ 1
KNSTRN-208ENST00000559604 TBC1D13Q9NVG8 400 aa21.28■■□□□ 1
KNSTRN-208ENST00000559604 PCDHB2Q9Y5E7 798 aa21.28■■□□□ 1
KNSTRN-208ENST00000559604 FSD2A1L4K1 749 aa21.27■■□□□ 1
KNSTRN-208ENST00000559604 POTEMA6NI47 508 aa21.27■■□□□ 1
KNSTRN-208ENST00000559604 OFD1O75665 1012 aa21.27■■□□□ 1
KNSTRN-208ENST00000559604 ALADP13716 330 aa21.27■■□□□ 1
KNSTRN-208ENST00000559604 ATP2B1P20020 1258 aa21.27■■□□□ 1
KNSTRN-208ENST00000559604 ALDH7A1P49419 539 aaKnown RBP21.27■■□□□ 1
KNSTRN-208ENST00000559604 SAFBQ15424 915 aaKnown RBP eCLIP21.27■■□□□ 1
KNSTRN-208ENST00000559604 C8orf34Q49A92 452 aa21.27■■□□□ 1
KNSTRN-208ENST00000559604 NOMO2Q5JPE7 1267 aa21.27■■□□□ 1
KNSTRN-208ENST00000559604 UBXN11Q5T124 520 aa21.27■■□□□ 1
KNSTRN-208ENST00000559604 TMC7Q7Z402 723 aa21.27■■□□□ 1
KNSTRN-208ENST00000559604 TMEM173Q86WV6 379 aaPredicted RBP21.27■■□□□ 1
KNSTRN-208ENST00000559604 C8orf76Q96K31 380 aa21.27■■□□□ 1
KNSTRN-208ENST00000559604 POP1Q99575 1024 aaKnown RBP21.27■■□□□ 1
KNSTRN-208ENST00000559604 INPP5FQ9Y2H2 1132 aa21.27■■□□□ 1
KNSTRN-208ENST00000559604 USP15Q9Y4E8 981 aaPredicted RBP21.27■■□□□ 1
KNSTRN-208ENST00000559604 A0A087WWV3 80 aa21.26■□□□□ 0.99
KNSTRN-208ENST00000559604 DCXO43602 365 aa21.26■□□□□ 0.99
KNSTRN-208ENST00000559604 ZC3H11AO75152 810 aaKnown RBP eCLIP21.26■□□□□ 0.99
KNSTRN-208ENST00000559604 MCM7P33993 719 aa21.26■□□□□ 0.99
KNSTRN-208ENST00000559604 TMEM184AQ6ZMB5 413 aa21.26■□□□□ 0.99
KNSTRN-208ENST00000559604 AGMOQ6ZNB7 445 aa21.26■□□□□ 0.99
KNSTRN-208ENST00000559604 MRPL10Q7Z7H8 261 aaKnown RBP21.26■□□□□ 0.99
KNSTRN-208ENST00000559604 PGBD4Q96DM1 585 aa21.26■□□□□ 0.99
KNSTRN-208ENST00000559604 NRDE2Q9H7Z3 1164 aa21.26■□□□□ 0.99
KNSTRN-208ENST00000559604 TRIOO75962 3097 aa21.25■□□□□ 0.99
KNSTRN-208ENST00000559604 C2orf71A6NGG8 1288 aa21.25■□□□□ 0.99
KNSTRN-208ENST00000559604 DGAT1O75907 488 aa21.25■□□□□ 0.99
KNSTRN-208ENST00000559604 SPATA31C1P0DKV0 1188 aa21.25■□□□□ 0.99
KNSTRN-208ENST00000559604 RARRES1P49788 294 aa21.25■□□□□ 0.99
KNSTRN-208ENST00000559604 PTENP60484 403 aa21.25■□□□□ 0.99
KNSTRN-208ENST00000559604 MXD4Q14582 209 aaPredicted RBP21.25■□□□□ 0.99
KNSTRN-208ENST00000559604 ASAP3Q8TDY4 903 aa21.25■□□□□ 0.99
KNSTRN-208ENST00000559604 PIGOQ8TEQ8 1089 aa21.25■□□□□ 0.99
KNSTRN-208ENST00000559604 TMEM169Q96HH4 297 aa21.25■□□□□ 0.99
KNSTRN-208ENST00000559604 ZSCAN31Q96LW9 406 aaPredicted RBP21.25■□□□□ 0.99
KNSTRN-208ENST00000559604 B4GALT3O60512 393 aa21.24■□□□□ 0.99
KNSTRN-208ENST00000559604 GALTP07902 379 aa21.24■□□□□ 0.99
KNSTRN-208ENST00000559604 ARL2P36404 184 aa21.24■□□□□ 0.99
KNSTRN-208ENST00000559604 AFF1P51825 1210 aaKnown RBP21.24■□□□□ 0.99
KNSTRN-208ENST00000559604 CAPSQ13938 189 aa21.24■□□□□ 0.99
KNSTRN-208ENST00000559604 SMC1AQ14683 1233 aaKnown RBP21.24■□□□□ 0.99
KNSTRN-208ENST00000559604 LLGL2Q6P1M3 1020 aa21.24■□□□□ 0.99
KNSTRN-208ENST00000559604 ZNF280BQ86YH2 543 aa21.24■□□□□ 0.99
KNSTRN-208ENST00000559604 IFNLR1Q8IU57 520 aaPredicted RBP21.24■□□□□ 0.99
KNSTRN-208ENST00000559604 MRPL43Q8N983 215 aaKnown RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms