RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 DENND3A2RUS2 1198 aa22.42■■□□□ 1.18
TSPAN3-207ENST00000559494 MYMKA6NI61 221 aa22.42■■□□□ 1.18
TSPAN3-207ENST00000559494 C9IYK1 514 aa22.42■■□□□ 1.18
TSPAN3-207ENST00000559494 POLR2DO15514 142 aaKnown RBP22.42■■□□□ 1.18
TSPAN3-207ENST00000559494 UPP2O95045 317 aa22.42■■□□□ 1.18
TSPAN3-207ENST00000559494 ZSCAN20P17040 1043 aaPredicted RBP22.42■■□□□ 1.18
TSPAN3-207ENST00000559494 HOXA11P31270 313 aaPredicted RBP22.42■■□□□ 1.18
TSPAN3-207ENST00000559494 NPTX2P47972 431 aa22.42■■□□□ 1.18
TSPAN3-207ENST00000559494 FXR1P51114 621 aaKnown RBP eCLIP22.42■■□□□ 1.18
TSPAN3-207ENST00000559494 FAM189BP81408 668 aa22.42■■□□□ 1.18
TSPAN3-207ENST00000559494 AMHR2Q16671 573 aa22.42■■□□□ 1.18
TSPAN3-207ENST00000559494 CRIPAKQ8N1N5 446 aa22.42■■□□□ 1.18
TSPAN3-207ENST00000559494 DHX58Q96C10 678 aa22.42■■□□□ 1.18
TSPAN3-207ENST00000559494 KIFC3Q9BVG8 833 aa22.42■■□□□ 1.18
TSPAN3-207ENST00000559494 CHST12Q9NRB3 414 aa22.42■■□□□ 1.18
TSPAN3-207ENST00000559494 ADGRA3Q8IWK6 1321 aa22.42■■□□□ 1.18
TSPAN3-207ENST00000559494 MYO9BQ13459 2157 aa22.42■■□□□ 1.18
TSPAN3-207ENST00000559494 A0A1B0GVL5 298 aa22.41■■□□□ 1.18
TSPAN3-207ENST00000559494 CCDC169A6NNP5 214 aa22.41■■□□□ 1.18
TSPAN3-207ENST00000559494 GJB5O95377 273 aa22.41■■□□□ 1.18
TSPAN3-207ENST00000559494 MYOGP15173 224 aa22.41■■□□□ 1.18
TSPAN3-207ENST00000559494 SLC24A5Q71RS6 500 aa22.41■■□□□ 1.18
TSPAN3-207ENST00000559494 IQUBQ8NA54 791 aa22.41■■□□□ 1.18
TSPAN3-207ENST00000559494 DEPTORQ8TB45 409 aa22.41■■□□□ 1.18
TSPAN3-207ENST00000559494 C2orf40Q9H1Z8 148 aa22.41■■□□□ 1.18
TSPAN3-207ENST00000559494 FZD8Q9H461 694 aa22.41■■□□□ 1.18
TSPAN3-207ENST00000559494 C17orf75Q9HAS0 396 aa22.41■■□□□ 1.18
TSPAN3-207ENST00000559494 C1orf112Q9NSG2 853 aa22.41■■□□□ 1.18
TSPAN3-207ENST00000559494 AGPAT5Q9NUQ2 364 aa22.41■■□□□ 1.18
TSPAN3-207ENST00000559494 KCNH3Q9ULD8 1083 aa22.41■■□□□ 1.18
TSPAN3-207ENST00000559494 ODF2LQ9ULJ1 636 aa22.41■■□□□ 1.18
TSPAN3-207ENST00000559494 YBX2Q9Y2T7 364 aaKnown RBP22.41■■□□□ 1.18
TSPAN3-207ENST00000559494 PCDHA11Q9Y5I1 949 aa22.41■■□□□ 1.18
TSPAN3-207ENST00000559494 GBF1Q92538 1859 aa22.4■■□□□ 1.18
TSPAN3-207ENST00000559494 TSPAN1O60635 241 aa22.4■■□□□ 1.18
TSPAN3-207ENST00000559494 KRT18P05783 430 aaKnown RBP22.4■■□□□ 1.18
TSPAN3-207ENST00000559494 PLS3P13797 630 aa22.4■■□□□ 1.18
TSPAN3-207ENST00000559494 SARSP49591 514 aaKnown RBP22.4■■□□□ 1.18
TSPAN3-207ENST00000559494 PCBP1Q15365 356 aaKnown RBP eCLIP22.4■■□□□ 1.18
TSPAN3-207ENST00000559494 TPRNQ4KMQ1 711 aa22.4■■□□□ 1.18
TSPAN3-207ENST00000559494 DYMQ7RTS9 669 aa22.4■■□□□ 1.18
TSPAN3-207ENST00000559494 ZBTB8OSQ8IWT0 167 aa22.4■■□□□ 1.18
TSPAN3-207ENST00000559494 DDX12PQ92771 950 aa22.4■■□□□ 1.18
TSPAN3-207ENST00000559494 STAMQ92783 540 aa22.4■■□□□ 1.18
TSPAN3-207ENST00000559494 DNAJC19Q96DA6 116 aa22.4■■□□□ 1.18
TSPAN3-207ENST00000559494 NTPCRQ9BSD7 190 aaKnown RBP22.4■■□□□ 1.18
TSPAN3-207ENST00000559494 ZBED2Q9BTP6 218 aa22.4■■□□□ 1.18
TSPAN3-207ENST00000559494 PIN4Q9Y237 131 aaKnown RBP22.4■■□□□ 1.18
TSPAN3-207ENST00000559494 HPSEQ9Y251 543 aa22.4■■□□□ 1.18
TSPAN3-207ENST00000559494 FAM237AA0A1B0GTK4 181 aa22.39■■□□□ 1.18
TSPAN3-207ENST00000559494 A0A1W2PQ27 194 aa22.39■■□□□ 1.18
TSPAN3-207ENST00000559494 A0A1W2PQ64 194 aa22.39■■□□□ 1.18
TSPAN3-207ENST00000559494 A0A1W2PQD8 194 aa22.39■■□□□ 1.18
TSPAN3-207ENST00000559494 PFKFB1P16118 471 aa22.39■■□□□ 1.18
TSPAN3-207ENST00000559494 ZNF131P52739 623 aa22.39■■□□□ 1.18
TSPAN3-207ENST00000559494 SPIRE2Q8WWL2 714 aa22.39■■□□□ 1.18
TSPAN3-207ENST00000559494 RAD9AQ99638 391 aa22.39■■□□□ 1.18
TSPAN3-207ENST00000559494 CCDC113Q9H0I3 377 aa22.39■■□□□ 1.18
TSPAN3-207ENST00000559494 CUEDC2Q9H467 287 aa22.39■■□□□ 1.18
TSPAN3-207ENST00000559494 KMT5AQ9NQR1 393 aa22.39■■□□□ 1.18
TSPAN3-207ENST00000559494 KBTBD4Q9NVX7 518 aa22.39■■□□□ 1.18
TSPAN3-207ENST00000559494 TTLL13PA6NNM8 815 aa22.38■■□□□ 1.17
TSPAN3-207ENST00000559494 SLC16A4O15374 487 aa22.38■■□□□ 1.17
TSPAN3-207ENST00000559494 B4GALT5O43286 388 aa22.38■■□□□ 1.17
TSPAN3-207ENST00000559494 TLL1O43897 1013 aa22.38■■□□□ 1.17
TSPAN3-207ENST00000559494 ERLIN2O94905 339 aa22.38■■□□□ 1.17
TSPAN3-207ENST00000559494 IBSPP21815 317 aaPredicted RBP22.38■■□□□ 1.17
TSPAN3-207ENST00000559494 DNAJB2P25686 324 aa22.38■■□□□ 1.17
TSPAN3-207ENST00000559494 EFNA5P52803 228 aa22.38■■□□□ 1.17
TSPAN3-207ENST00000559494 HTRA4P83105 476 aaPredicted RBP22.38■■□□□ 1.17
TSPAN3-207ENST00000559494 DMP1Q13316 513 aaPredicted RBP22.38■■□□□ 1.17
TSPAN3-207ENST00000559494 RAB30Q15771 203 aa22.38■■□□□ 1.17
TSPAN3-207ENST00000559494 FAM187BQ17R55 369 aa22.38■■□□□ 1.17
TSPAN3-207ENST00000559494 PPP4R3CPQ6ZMV5 832 aa22.38■■□□□ 1.17
TSPAN3-207ENST00000559494 NPAS4Q8IUM7 802 aa22.38■■□□□ 1.17
TSPAN3-207ENST00000559494 CPB2Q96IY4 423 aa22.38■■□□□ 1.17
TSPAN3-207ENST00000559494 PRMT7Q9NVM4 692 aaPredicted RBP22.38■■□□□ 1.17
TSPAN3-207ENST00000559494 DACT1Q9NYF0 836 aa22.38■■□□□ 1.17
TSPAN3-207ENST00000559494 ARHGAP28Q9P2N2 729 aa22.38■■□□□ 1.17
TSPAN3-207ENST00000559494 MSRAQ9UJ68 235 aa22.38■■□□□ 1.17
TSPAN3-207ENST00000559494 USP20Q9Y2K6 914 aa22.38■■□□□ 1.17
TSPAN3-207ENST00000559494 A0A0U1RQF3 1178 aa22.37■■□□□ 1.17
TSPAN3-207ENST00000559494 FAM13AO94988 1023 aa22.37■■□□□ 1.17
TSPAN3-207ENST00000559494 EDN1P05305 212 aa22.37■■□□□ 1.17
TSPAN3-207ENST00000559494 ARF4P18085 180 aaPredicted RBP22.37■■□□□ 1.17
TSPAN3-207ENST00000559494 AXLP30530 894 aa22.37■■□□□ 1.17
TSPAN3-207ENST00000559494 NDUFA8P51970 172 aa22.37■■□□□ 1.17
TSPAN3-207ENST00000559494 MAPK6Q16659 721 aa22.37■■□□□ 1.17
TSPAN3-207ENST00000559494 UBXN11Q5T124 520 aa22.37■■□□□ 1.17
TSPAN3-207ENST00000559494 TWF2Q6IBS0 349 aaKnown RBP22.37■■□□□ 1.17
TSPAN3-207ENST00000559494 TAS1R3Q7RTX0 852 aa22.37■■□□□ 1.17
TSPAN3-207ENST00000559494 ECHDC2Q86YB7 292 aa22.37■■□□□ 1.17
TSPAN3-207ENST00000559494 MYCT1Q8N699 235 aa22.37■■□□□ 1.17
TSPAN3-207ENST00000559494 FSIP1Q8NA03 581 aa22.37■■□□□ 1.17
TSPAN3-207ENST00000559494 TIFAQ96CG3 184 aa22.37■■□□□ 1.17
TSPAN3-207ENST00000559494 TRAIPQ9BWF2 469 aa22.37■■□□□ 1.17
TSPAN3-207ENST00000559494 NKX2-4Q9H2Z4 354 aa22.37■■□□□ 1.17
TSPAN3-207ENST00000559494 GOLPH3LQ9H4A5 285 aa22.37■■□□□ 1.17
TSPAN3-207ENST00000559494 TMEM134Q9H6X4 195 aa22.37■■□□□ 1.17
TSPAN3-207ENST00000559494 PARVGQ9HBI0 331 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms