RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 KCNF1Q9H3M0 494 aa6.56□□□□□ -1.36
USP3-212ENST00000559276 ZSCAN16Q9H4T2 348 aaPredicted RBP6.56□□□□□ -1.36
USP3-212ENST00000559276 ELAC1Q9H777 363 aaKnown RBP6.56□□□□□ -1.36
USP3-212ENST00000559276 TLE6Q9H808 572 aa6.56□□□□□ -1.36
USP3-212ENST00000559276 GDPD2Q9HCC8 539 aa6.56□□□□□ -1.36
USP3-212ENST00000559276 TLR9Q9NR96 1032 aa6.56□□□□□ -1.36
USP3-212ENST00000559276 TBC1D22BQ9NU19 505 aa6.56□□□□□ -1.36
USP3-212ENST00000559276 GABBR1Q9UBS5 961 aa6.56□□□□□ -1.36
USP3-212ENST00000559276 CFAP45Q9UL16 551 aa6.56□□□□□ -1.36
USP3-212ENST00000559276 LRFN2Q9ULH4 789 aa6.56□□□□□ -1.36
USP3-212ENST00000559276 PCDHA10Q9Y5I2 948 aa6.56□□□□□ -1.36
USP3-212ENST00000559276 DENND3A2RUS2 1198 aa6.55□□□□□ -1.36
USP3-212ENST00000559276 TMEM150BA6NC51 233 aa6.55□□□□□ -1.36
USP3-212ENST00000559276 TMEM221A6NGB7 291 aa6.55□□□□□ -1.36
USP3-212ENST00000559276 M0R296 226 aa6.55□□□□□ -1.36
USP3-212ENST00000559276 GPR182O15218 404 aa6.55□□□□□ -1.36
USP3-212ENST00000559276 CSDE1O75534 798 aaKnown RBP6.55□□□□□ -1.36
USP3-212ENST00000559276 PSAPP07602 524 aa6.55□□□□□ -1.36
USP3-212ENST00000559276 FGFR4P22455 802 aa6.55□□□□□ -1.36
USP3-212ENST00000559276 EIF4BP23588 611 aaKnown RBP6.55□□□□□ -1.36
USP3-212ENST00000559276 GPC3P51654 580 aa6.55□□□□□ -1.36
USP3-212ENST00000559276 ZNF75DP51815 510 aa6.55□□□□□ -1.36
USP3-212ENST00000559276 DNM1Q05193 864 aaKnown RBP6.55□□□□□ -1.36
USP3-212ENST00000559276 TCF15Q12870 199 aa6.55□□□□□ -1.36
USP3-212ENST00000559276 LARP1BQ659C4 914 aaKnown RBP6.55□□□□□ -1.36
USP3-212ENST00000559276 EFCAB12Q6NXP0 572 aa6.55□□□□□ -1.36
USP3-212ENST00000559276 ANKRD54Q6NXT1 300 aa6.55□□□□□ -1.36
USP3-212ENST00000559276 KCNT2Q6UVM3 1135 aa6.55□□□□□ -1.36
USP3-212ENST00000559276 FAM43BQ6ZT52 329 aaPredicted RBP6.55□□□□□ -1.36
USP3-212ENST00000559276 TRIM67Q6ZTA4 783 aa6.55□□□□□ -1.36
USP3-212ENST00000559276 TMEM173Q86WV6 379 aaPredicted RBP6.55□□□□□ -1.36
USP3-212ENST00000559276 ECHDC2Q86YB7 292 aa6.55□□□□□ -1.36
USP3-212ENST00000559276 REXO1Q8N1G1 1221 aaKnown RBP6.55□□□□□ -1.36
USP3-212ENST00000559276 METTL13Q8N6R0 699 aa6.55□□□□□ -1.36
USP3-212ENST00000559276 CCDC112Q8NEF3 446 aa6.55□□□□□ -1.36
USP3-212ENST00000559276 MRPS27Q92552 414 aaKnown RBP6.55□□□□□ -1.36
USP3-212ENST00000559276 SPOCK2Q92563 424 aa6.55□□□□□ -1.36
USP3-212ENST00000559276 SLC5A5Q92911 643 aa6.55□□□□□ -1.36
USP3-212ENST00000559276 ASIC4Q96FT7 647 aa6.55□□□□□ -1.36
USP3-212ENST00000559276 JAKMIP1Q96N16 626 aaKnown RBP6.55□□□□□ -1.36
USP3-212ENST00000559276 POP1Q99575 1024 aaKnown RBP6.55□□□□□ -1.36
USP3-212ENST00000559276 LLPHQ9BRT6 129 aaKnown RBP6.55□□□□□ -1.36
USP3-212ENST00000559276 PHF7Q9BWX1 381 aaPredicted RBP6.55□□□□□ -1.36
USP3-212ENST00000559276 TMEM117Q9H0C3 514 aa6.55□□□□□ -1.36
USP3-212ENST00000559276 KCNH6Q9H252 994 aa6.55□□□□□ -1.36
USP3-212ENST00000559276 NCOA5Q9HCD5 579 aaKnown RBP6.55□□□□□ -1.36
USP3-212ENST00000559276 C6orf50Q9HD87 102 aa6.55□□□□□ -1.36
USP3-212ENST00000559276 LZTS1Q9Y250 596 aa6.55□□□□□ -1.36
USP3-212ENST00000559276 PCDHB12Q9Y5F1 795 aa6.55□□□□□ -1.36
USP3-212ENST00000559276 PIEZO1Q92508 2521 aa6.55□□□□□ -1.36
USP3-212ENST00000559276 DENND4AQ7Z401 1863 aa6.55□□□□□ -1.36
USP3-212ENST00000559276 PLXNA3P51805 1871 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 IGKV6-21A0A0C4DH24 114 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 A0A0U1RQF3 1178 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 CCDC66A2RUB6 948 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 MEIS3P2A8K0S8 358 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 GOLGA6L19H0YKK7 550 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 MAGEB2O15479 319 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 CCP110O43303 1012 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 NRDCO43847 1150 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 B4GALT3O60512 393 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 PSMD10O75832 226 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 OATP04181 439 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 HMGB1P09429 215 aaKnown RBP6.54□□□□□ -1.36
USP3-212ENST00000559276 DARSP14868 501 aaKnown RBP6.54□□□□□ -1.36
USP3-212ENST00000559276 IFNAR1P17181 557 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 LAG3P18627 525 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 RPS6KB1P23443 525 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 PDIA3P30101 505 aaKnown RBP6.54□□□□□ -1.36
USP3-212ENST00000559276 VCPP55072 806 aaKnown RBP6.54□□□□□ -1.36
USP3-212ENST00000559276 SETQ01105 290 aaPredicted RBP6.54□□□□□ -1.36
USP3-212ENST00000559276 PRKCEQ02156 737 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 NCBP1Q09161 790 aaKnown RBP6.54□□□□□ -1.36
USP3-212ENST00000559276 TOB2Q14106 344 aaPredicted RBP6.54□□□□□ -1.36
USP3-212ENST00000559276 PLPP4Q5VZY2 271 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 KANK3Q6NY19 840 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 BLOC1S2Q6QNY1 142 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 CCDC83Q8IWF9 413 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 CKAP2LQ8IYA6 745 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 THNSL1Q8IYQ7 743 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 SLC39A11Q8N1S5 342 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 ZNF397Q8NF99 534 aaPredicted RBP6.54□□□□□ -1.36
USP3-212ENST00000559276 ETNPPLQ8TBG4 499 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 MICAL1Q8TDZ2 1067 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 BCL7CQ8WUZ0 217 aaPredicted RBP6.54□□□□□ -1.36
USP3-212ENST00000559276 CHAMP1Q96JM3 812 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 RPGRIP1Q96KN7 1286 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 SPATA32Q96LK8 384 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 MFSD14AQ96MC6 490 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 MBOAT7Q96N66 472 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 AIFM3Q96NN9 605 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 RIT2Q99578 217 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 CDCA3Q99618 268 aaPredicted RBP6.54□□□□□ -1.36
USP3-212ENST00000559276 TCF25Q9BQ70 676 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 SH2D3AQ9BRG2 576 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 APOL5Q9BWW9 433 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 VN1R3Q9BXE9 311 aa6.54□□□□□ -1.36
USP3-212ENST00000559276 RNF26Q9BY78 433 aaPredicted RBP6.54□□□□□ -1.36
USP3-212ENST00000559276 NIFKQ9BYG3 293 aaKnown RBP6.54□□□□□ -1.36
USP3-212ENST00000559276 NAT10Q9H0A0 1025 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms