RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 CDR2LQ86X02 465 aaPredicted RBP12.05□□□□□ -0.48
TPM1-217ENST00000559108 CRIPAKQ8N1N5 446 aa12.05□□□□□ -0.48
TPM1-217ENST00000559108 KIFAP3Q92845 792 aa12.05□□□□□ -0.48
TPM1-217ENST00000559108 C7orf25Q9BPX7 421 aa12.05□□□□□ -0.48
TPM1-217ENST00000559108 UBE2OQ9C0C9 1292 aaKnown RBP12.05□□□□□ -0.48
TPM1-217ENST00000559108 TNMDQ9H2S6 317 aa12.05□□□□□ -0.48
TPM1-217ENST00000559108 KCND2Q9NZV8 630 aa12.05□□□□□ -0.48
TPM1-217ENST00000559108 ARHGAP28Q9P2N2 729 aa12.05□□□□□ -0.48
TPM1-217ENST00000559108 ODF2LQ9ULJ1 636 aa12.05□□□□□ -0.48
TPM1-217ENST00000559108 ANK1P16157 1881 aa12.05□□□□□ -0.48
TPM1-217ENST00000559108 TRIP11Q15643 1979 aa12.05□□□□□ -0.48
TPM1-217ENST00000559108 M0QZ92 97 aa12.04□□□□□ -0.48
TPM1-217ENST00000559108 ASAP2O43150 1006 aa12.04□□□□□ -0.48
TPM1-217ENST00000559108 PPP1R37O75864 691 aa12.04□□□□□ -0.48
TPM1-217ENST00000559108 RPLP2P05387 115 aaKnown RBP12.04□□□□□ -0.48
TPM1-217ENST00000559108 PHKA2P46019 1235 aa12.04□□□□□ -0.48
TPM1-217ENST00000559108 NCKAP1LP55160 1127 aa12.04□□□□□ -0.48
TPM1-217ENST00000559108 WDR5P61964 334 aaKnown RBP12.04□□□□□ -0.48
TPM1-217ENST00000559108 FAM160A1Q05DH4 1040 aa12.04□□□□□ -0.48
TPM1-217ENST00000559108 POU5F1BQ06416 359 aa12.04□□□□□ -0.48
TPM1-217ENST00000559108 KCNA1Q09470 495 aa12.04□□□□□ -0.48
TPM1-217ENST00000559108 NFX1Q12986 1120 aaKnown RBP12.04□□□□□ -0.48
TPM1-217ENST00000559108 PAK2Q13177 524 aa12.04□□□□□ -0.48
TPM1-217ENST00000559108 MXD4Q14582 209 aaPredicted RBP12.04□□□□□ -0.48
TPM1-217ENST00000559108 ZC2HC1CQ53FD0 456 aaPredicted RBP12.04□□□□□ -0.48
TPM1-217ENST00000559108 NT5DC1Q5TFE4 455 aa12.04□□□□□ -0.48
TPM1-217ENST00000559108 PRPF38BQ5VTL8 546 aaKnown RBP12.04□□□□□ -0.48
TPM1-217ENST00000559108 EEF1DP3Q658K8 133 aa12.04□□□□□ -0.48
TPM1-217ENST00000559108 CNNM4Q6P4Q7 775 aa12.04□□□□□ -0.48
TPM1-217ENST00000559108 EXOC8Q8IYI6 725 aa12.04□□□□□ -0.48
TPM1-217ENST00000559108 TMEM161BQ8NDZ6 487 aa12.04□□□□□ -0.48
TPM1-217ENST00000559108 HERVK_113Q902F9 699 aa12.04□□□□□ -0.48
TPM1-217ENST00000559108 CPB2Q96IY4 423 aa12.04□□□□□ -0.48
TPM1-217ENST00000559108 DRC1Q96MC2 740 aa12.04□□□□□ -0.48
TPM1-217ENST00000559108 SCLT1Q96NL6 688 aa12.04□□□□□ -0.48
TPM1-217ENST00000559108 NTPCRQ9BSD7 190 aaKnown RBP12.04□□□□□ -0.48
TPM1-217ENST00000559108 STRA6Q9BX79 667 aa12.04□□□□□ -0.48
TPM1-217ENST00000559108 NFKBIZQ9BYH8 718 aa12.04□□□□□ -0.48
TPM1-217ENST00000559108 GCOM2Q9BZD3 368 aaPredicted RBP12.04□□□□□ -0.48
TPM1-217ENST00000559108 FZD8Q9H461 694 aa12.04□□□□□ -0.48
TPM1-217ENST00000559108 CUEDC2Q9H467 287 aa12.04□□□□□ -0.48
TPM1-217ENST00000559108 TBC1D7Q9P0N9 293 aa12.04□□□□□ -0.48
TPM1-217ENST00000559108 SQORQ9Y6N5 450 aa12.04□□□□□ -0.48
TPM1-217ENST00000559108 LAMA3Q16787 3333 aa12.04□□□□□ -0.48
TPM1-217ENST00000559108 PDCD11Q14690 1871 aaKnown RBP12.04□□□□□ -0.48
TPM1-217ENST00000559108 MEIS3P2A8K0S8 358 aa12.03□□□□□ -0.48
TPM1-217ENST00000559108 TISP43B9A030 160 aa12.03□□□□□ -0.48
TPM1-217ENST00000559108 INO80B-WBP1J3KQ70 363 aa12.03□□□□□ -0.48
TPM1-217ENST00000559108 ENPP3O14638 875 aa12.03□□□□□ -0.48
TPM1-217ENST00000559108 ABLIM1O14639 778 aa12.03□□□□□ -0.48
TPM1-217ENST00000559108 FAM13AO94988 1023 aa12.03□□□□□ -0.48
TPM1-217ENST00000559108 ARHGEF15O94989 841 aa12.03□□□□□ -0.48
TPM1-217ENST00000559108 FGBP02675 491 aa12.03□□□□□ -0.48
TPM1-217ENST00000559108 KRT18P05783 430 aaKnown RBP12.03□□□□□ -0.48
TPM1-217ENST00000559108 MAPTP10636 758 aaKnown RBP12.03□□□□□ -0.48
TPM1-217ENST00000559108 ATF7P17544 494 aaPredicted RBP12.03□□□□□ -0.48
TPM1-217ENST00000559108 ARF4P18085 180 aaPredicted RBP12.03□□□□□ -0.48
TPM1-217ENST00000559108 HOXD13P35453 343 aa12.03□□□□□ -0.48
TPM1-217ENST00000559108 GATMP50440 423 aa12.03□□□□□ -0.48
TPM1-217ENST00000559108 DPYDQ12882 1025 aa12.03□□□□□ -0.48
TPM1-217ENST00000559108 COASYQ13057 564 aa12.03□□□□□ -0.48
TPM1-217ENST00000559108 SLC39A4Q6P5W5 647 aa12.03□□□□□ -0.48
TPM1-217ENST00000559108 PSRC1Q6PGN9 363 aaPredicted RBP12.03□□□□□ -0.48
TPM1-217ENST00000559108 SRGAP1Q7Z6B7 1085 aa12.03□□□□□ -0.48
TPM1-217ENST00000559108 GPT2Q8TD30 523 aa12.03□□□□□ -0.48
TPM1-217ENST00000559108 SPIRE2Q8WWL2 714 aa12.03□□□□□ -0.48
TPM1-217ENST00000559108 SEPT8Q92599 483 aa12.03□□□□□ -0.48
TPM1-217ENST00000559108 TIPINQ9BVW5 301 aa12.03□□□□□ -0.48
TPM1-217ENST00000559108 INO80BQ9C086 356 aaPredicted RBP12.03□□□□□ -0.48
TPM1-217ENST00000559108 HAPLN2Q9GZV7 340 aa12.03□□□□□ -0.48
TPM1-217ENST00000559108 ZHX3Q9H4I2 956 aa12.03□□□□□ -0.48
TPM1-217ENST00000559108 AGPAT5Q9NUQ2 364 aa12.03□□□□□ -0.48
TPM1-217ENST00000559108 RNF19AQ9NV58 838 aa12.03□□□□□ -0.48
TPM1-217ENST00000559108 NLRC5Q86WI3 1866 aa12.03□□□□□ -0.48
TPM1-217ENST00000559108 ZMYM2Q9UBW7 1377 aa12.03□□□□□ -0.48
TPM1-217ENST00000559108 ATG2AQ2TAZ0 1938 aa12.02□□□□□ -0.49
TPM1-217ENST00000559108 CCDC169A6NNP5 214 aa12.02□□□□□ -0.49
TPM1-217ENST00000559108 C9IYK1 514 aa12.02□□□□□ -0.49
TPM1-217ENST00000559108 SOX1O00570 391 aaPredicted RBP12.02□□□□□ -0.49
TPM1-217ENST00000559108 MEFVO15553 781 aaPredicted RBP12.02□□□□□ -0.49
TPM1-217ENST00000559108 PARNO95453 639 aaKnown RBP12.02□□□□□ -0.49
TPM1-217ENST00000559108 PFKMP08237 780 aa12.02□□□□□ -0.49
TPM1-217ENST00000559108 MYBP10242 640 aa12.02□□□□□ -0.49
TPM1-217ENST00000559108 IDEP14735 1019 aa12.02□□□□□ -0.49
TPM1-217ENST00000559108 UBE2HP62256 183 aa12.02□□□□□ -0.49
TPM1-217ENST00000559108 ASIC1P78348 528 aa12.02□□□□□ -0.49
TPM1-217ENST00000559108 DMP1Q13316 513 aaPredicted RBP12.02□□□□□ -0.49
TPM1-217ENST00000559108 PNOCQ13519 176 aa12.02□□□□□ -0.49
TPM1-217ENST00000559108 TFDP1Q14186 410 aa12.02□□□□□ -0.49
TPM1-217ENST00000559108 ODR4Q5SWX8 454 aa12.02□□□□□ -0.49
TPM1-217ENST00000559108 PPP4R3CPQ6ZMV5 832 aa12.02□□□□□ -0.49
TPM1-217ENST00000559108 CATSPER4Q7RTX7 472 aa12.02□□□□□ -0.49
TPM1-217ENST00000559108 SPRED2Q7Z698 418 aa12.02□□□□□ -0.49
TPM1-217ENST00000559108 MYCT1Q8N699 235 aa12.02□□□□□ -0.49
TPM1-217ENST00000559108 USP38Q8NB14 1042 aa12.02□□□□□ -0.49
TPM1-217ENST00000559108 DEPTORQ8TB45 409 aa12.02□□□□□ -0.49
TPM1-217ENST00000559108 RNPC3Q96LT9 517 aaKnown RBP12.02□□□□□ -0.49
TPM1-217ENST00000559108 ADAM2Q99965 735 aa12.02□□□□□ -0.49
TPM1-217ENST00000559108 EIF2AQ9BY44 585 aaKnown RBP12.02□□□□□ -0.49
TPM1-217ENST00000559108 CXCL16Q9H2A7 254 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms