RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 GCOM2Q9BZD3 368 aaPredicted RBP12.67□□□□□ -0.38
SNX1-204ENST00000559061 RGS18Q9NS28 235 aa12.67□□□□□ -0.38
SNX1-204ENST00000559061 AGPAT5Q9NUQ2 364 aa12.67□□□□□ -0.38
SNX1-204ENST00000559061 KBTBD4Q9NVX7 518 aa12.67□□□□□ -0.38
SNX1-204ENST00000559061 ARHGAP28Q9P2N2 729 aa12.67□□□□□ -0.38
SNX1-204ENST00000559061 SLC4A7Q9Y6M7 1214 aa12.67□□□□□ -0.38
SNX1-204ENST00000559061 NLRC5Q86WI3 1866 aa12.67□□□□□ -0.38
SNX1-204ENST00000559061 A0A1B0GVL5 298 aa12.66□□□□□ -0.38
SNX1-204ENST00000559061 ASAP2O43150 1006 aa12.66□□□□□ -0.38
SNX1-204ENST00000559061 CMA1P23946 247 aa12.66□□□□□ -0.38
SNX1-204ENST00000559061 CASP1P29466 404 aa12.66□□□□□ -0.38
SNX1-204ENST00000559061 NAMPTP43490 491 aa12.66□□□□□ -0.38
SNX1-204ENST00000559061 GATMP50440 423 aa12.66□□□□□ -0.38
SNX1-204ENST00000559061 FAM189BP81408 668 aa12.66□□□□□ -0.38
SNX1-204ENST00000559061 HTRA4P83105 476 aaPredicted RBP12.66□□□□□ -0.38
SNX1-204ENST00000559061 SMAD3P84022 425 aaKnown RBP12.66□□□□□ -0.38
SNX1-204ENST00000559061 RRAGBQ5VZM2 374 aa12.66□□□□□ -0.38
SNX1-204ENST00000559061 SRGAP1Q7Z6B7 1085 aa12.66□□□□□ -0.38
SNX1-204ENST00000559061 ZNF598Q86UK7 904 aaKnown RBP12.66□□□□□ -0.38
SNX1-204ENST00000559061 KIFAP3Q92845 792 aa12.66□□□□□ -0.38
SNX1-204ENST00000559061 TOP1MTQ969P6 601 aa12.66□□□□□ -0.38
SNX1-204ENST00000559061 DHX58Q96C10 678 aa12.66□□□□□ -0.38
SNX1-204ENST00000559061 SLC9A7Q96T83 725 aa12.66□□□□□ -0.38
SNX1-204ENST00000559061 ADAM2Q99965 735 aa12.66□□□□□ -0.38
SNX1-204ENST00000559061 FGFBP2Q9BYJ0 223 aa12.66□□□□□ -0.38
SNX1-204ENST00000559061 FZD8Q9H461 694 aa12.66□□□□□ -0.38
SNX1-204ENST00000559061 CHMP5Q9NZZ3 219 aa12.66□□□□□ -0.38
SNX1-204ENST00000559061 ATP6V1DQ9Y5K8 247 aa12.66□□□□□ -0.38
SNX1-204ENST00000559061 A0A1W2PQ27 194 aa12.65□□□□□ -0.38
SNX1-204ENST00000559061 A0A1W2PQ64 194 aa12.65□□□□□ -0.38
SNX1-204ENST00000559061 A0A1W2PQD8 194 aa12.65□□□□□ -0.38
SNX1-204ENST00000559061 FRMD3A2A2Y4 597 aa12.65□□□□□ -0.38
SNX1-204ENST00000559061 LRRIQ4A6NIV6 560 aa12.65□□□□□ -0.38
SNX1-204ENST00000559061 MEIS3P2A8K0S8 358 aa12.65□□□□□ -0.38
SNX1-204ENST00000559061 ABLIM1O14639 778 aa12.65□□□□□ -0.38
SNX1-204ENST00000559061 GPR182O15218 404 aa12.65□□□□□ -0.38
SNX1-204ENST00000559061 POLR2DO15514 142 aaKnown RBP12.65□□□□□ -0.38
SNX1-204ENST00000559061 GJB5O95377 273 aa12.65□□□□□ -0.38
SNX1-204ENST00000559061 ARF4P18085 180 aaPredicted RBP12.65□□□□□ -0.38
SNX1-204ENST00000559061 STAT6P42226 847 aa12.65□□□□□ -0.38
SNX1-204ENST00000559061 PHKA2P46019 1235 aa12.65□□□□□ -0.38
SNX1-204ENST00000559061 NDUFA8P51970 172 aa12.65□□□□□ -0.38
SNX1-204ENST00000559061 PEX3P56589 373 aa12.65□□□□□ -0.38
SNX1-204ENST00000559061 CDC42EP1Q00587 391 aa12.65□□□□□ -0.38
SNX1-204ENST00000559061 CCDC73Q6ZRK6 1079 aa12.65□□□□□ -0.38
SNX1-204ENST00000559061 GRAMD1CQ8IYS0 662 aa12.65□□□□□ -0.38
SNX1-204ENST00000559061 MYOCDQ8IZQ8 938 aa12.65□□□□□ -0.38
SNX1-204ENST00000559061 TMEM161BQ8NDZ6 487 aa12.65□□□□□ -0.38
SNX1-204ENST00000559061 PHOSPHO2Q8TCD6 241 aa12.65□□□□□ -0.38
SNX1-204ENST00000559061 SP7Q8TDD2 431 aaPredicted RBP12.65□□□□□ -0.38
SNX1-204ENST00000559061 KCNN1Q92952 543 aa12.65□□□□□ -0.38
SNX1-204ENST00000559061 CPB2Q96IY4 423 aa12.65□□□□□ -0.38
SNX1-204ENST00000559061 SCLT1Q96NL6 688 aa12.65□□□□□ -0.38
SNX1-204ENST00000559061 SCAND2PQ9GZW5 306 aaPredicted RBP12.65□□□□□ -0.38
SNX1-204ENST00000559061 TTYH1Q9H313 450 aaPredicted RBP12.65□□□□□ -0.38
SNX1-204ENST00000559061 KCND2Q9NZV8 630 aa12.65□□□□□ -0.38
SNX1-204ENST00000559061 CCDC39Q9UFE4 941 aa12.65□□□□□ -0.38
SNX1-204ENST00000559061 KCNH3Q9ULD8 1083 aa12.65□□□□□ -0.38
SNX1-204ENST00000559061 RALGAPA2Q2PPJ7 1873 aa12.64□□□□□ -0.39
SNX1-204ENST00000559061 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.64□□□□□ -0.39
SNX1-204ENST00000559061 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.64□□□□□ -0.39
SNX1-204ENST00000559061 EFCAB14O75071 495 aa12.64□□□□□ -0.39
SNX1-204ENST00000559061 GADD45BO75293 160 aaPredicted RBP12.64□□□□□ -0.39
SNX1-204ENST00000559061 PLS3P13797 630 aa12.64□□□□□ -0.39
SNX1-204ENST00000559061 SFPQP23246 707 aaKnown RBP eCLIP12.64□□□□□ -0.39
SNX1-204ENST00000559061 DNAJB2P25686 324 aa12.64□□□□□ -0.39
SNX1-204ENST00000559061 TXLNAP40222 546 aa12.64□□□□□ -0.39
SNX1-204ENST00000559061 SARSP49591 514 aaKnown RBP12.64□□□□□ -0.39
SNX1-204ENST00000559061 NCKAP1LP55160 1127 aa12.64□□□□□ -0.39
SNX1-204ENST00000559061 TFDP1Q14186 410 aa12.64□□□□□ -0.39
SNX1-204ENST00000559061 FAM187BQ17R55 369 aa12.64□□□□□ -0.39
SNX1-204ENST00000559061 NT5DC1Q5TFE4 455 aa12.64□□□□□ -0.39
SNX1-204ENST00000559061 FAM117BQ6P1L5 589 aa12.64□□□□□ -0.39
SNX1-204ENST00000559061 DYMQ7RTS9 669 aa12.64□□□□□ -0.39
SNX1-204ENST00000559061 CATSPER4Q7RTX7 472 aa12.64□□□□□ -0.39
SNX1-204ENST00000559061 CDR2LQ86X02 465 aaPredicted RBP12.64□□□□□ -0.39
SNX1-204ENST00000559061 RASSF8Q8NHQ8 419 aa12.64□□□□□ -0.39
SNX1-204ENST00000559061 DDX12PQ92771 950 aa12.64□□□□□ -0.39
SNX1-204ENST00000559061 ZNF689Q96CS4 500 aaPredicted RBP12.64□□□□□ -0.39
SNX1-204ENST00000559061 NTPCRQ9BSD7 190 aaKnown RBP12.64□□□□□ -0.39
SNX1-204ENST00000559061 TIPINQ9BVW5 301 aa12.64□□□□□ -0.39
SNX1-204ENST00000559061 TRAIPQ9BWF2 469 aa12.64□□□□□ -0.39
SNX1-204ENST00000559061 FTHL17Q9BXU8 183 aa12.64□□□□□ -0.39
SNX1-204ENST00000559061 EIF2AQ9BY44 585 aaKnown RBP12.64□□□□□ -0.39
SNX1-204ENST00000559061 NKX2-4Q9H2Z4 354 aa12.64□□□□□ -0.39
SNX1-204ENST00000559061 HCSTQ9UBK5 93 aa12.64□□□□□ -0.39
SNX1-204ENST00000559061 SERTAD1Q9UHV2 236 aa12.64□□□□□ -0.39
SNX1-204ENST00000559061 ODF2LQ9ULJ1 636 aa12.64□□□□□ -0.39
SNX1-204ENST00000559061 CNTNAP2Q9UHC6 1331 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 EPOPA6NHQ4 379 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 INO80B-WBP1J3KQ70 363 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 SLC16A4O15374 487 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 PPP1R37O75864 691 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 DGKIO75912 1065 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 AMHP03971 560 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 MAPTP10636 758 aaKnown RBP12.63□□□□□ -0.39
SNX1-204ENST00000559061 KCNJ6P48051 423 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 CASP5P51878 434 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 EHHADHQ08426 723 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 LONRF3Q496Y0 759 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms