RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 BMP2KQ9NSY1 1161 aaPredicted RBP12.5□□□□□ -0.41
BMP4-204ENST00000558961 HCSTQ9UBK5 93 aa12.5□□□□□ -0.41
BMP4-204ENST00000558961 PIN4Q9Y237 131 aaKnown RBP12.5□□□□□ -0.41
BMP4-204ENST00000558961 BMP1P13497 986 aa12.49□□□□□ -0.41
BMP4-204ENST00000558961 LAG3P18627 525 aa12.49□□□□□ -0.41
BMP4-204ENST00000558961 DNAJB1P25685 340 aa12.49□□□□□ -0.41
BMP4-204ENST00000558961 HOXA11P31270 313 aaPredicted RBP12.49□□□□□ -0.41
BMP4-204ENST00000558961 ATP2C1P98194 919 aaPredicted RBP12.49□□□□□ -0.41
BMP4-204ENST00000558961 CAPSQ13938 189 aa12.49□□□□□ -0.41
BMP4-204ENST00000558961 TCEAL5Q5H9L2 206 aa12.49□□□□□ -0.41
BMP4-204ENST00000558961 TWF2Q6IBS0 349 aaKnown RBP12.49□□□□□ -0.41
BMP4-204ENST00000558961 LRRC55Q6ZSA7 311 aa12.49□□□□□ -0.41
BMP4-204ENST00000558961 CATSPER4Q7RTX7 472 aa12.49□□□□□ -0.41
BMP4-204ENST00000558961 KLHL23Q8NBE8 558 aa12.49□□□□□ -0.41
BMP4-204ENST00000558961 COLGALT1Q8NBJ5 622 aa12.49□□□□□ -0.41
BMP4-204ENST00000558961 MCPH1Q8NEM0 835 aa12.49□□□□□ -0.41
BMP4-204ENST00000558961 NACC1Q96RE7 527 aa12.49□□□□□ -0.41
BMP4-204ENST00000558961 ALG13Q9NP73 1137 aaKnown RBP12.49□□□□□ -0.41
BMP4-204ENST00000558961 AAASQ9NRG9 546 aa12.49□□□□□ -0.41
BMP4-204ENST00000558961 FAM105AQ9NUU6 356 aa12.49□□□□□ -0.41
BMP4-204ENST00000558961 TYW1Q9NV66 732 aaKnown RBP12.49□□□□□ -0.41
BMP4-204ENST00000558961 SMC3Q9UQE7 1217 aa12.49□□□□□ -0.41
BMP4-204ENST00000558961 ZDHHC9Q9Y397 364 aa12.49□□□□□ -0.41
BMP4-204ENST00000558961 STK24Q9Y6E0 443 aa12.49□□□□□ -0.41
BMP4-204ENST00000558961 CUL9Q8IWT3 2517 aa12.49□□□□□ -0.41
BMP4-204ENST00000558961 TCF20Q9UGU0 1960 aaKnown RBP12.49□□□□□ -0.41
BMP4-204ENST00000558961 USO1O60763 962 aaKnown RBP12.48□□□□□ -0.41
BMP4-204ENST00000558961 SRGAP2CP0DJJ0 459 aa12.48□□□□□ -0.41
BMP4-204ENST00000558961 GLRA2P23416 452 aa12.48□□□□□ -0.41
BMP4-204ENST00000558961 AXLP30530 894 aa12.48□□□□□ -0.41
BMP4-204ENST00000558961 KCNQ1P51787 676 aa12.48□□□□□ -0.41
BMP4-204ENST00000558961 MBTD1Q05BQ5 628 aa12.48□□□□□ -0.41
BMP4-204ENST00000558961 TFDP1Q14186 410 aa12.48□□□□□ -0.41
BMP4-204ENST00000558961 IL17AQ16552 155 aa12.48□□□□□ -0.41
BMP4-204ENST00000558961 ECM1Q16610 540 aa12.48□□□□□ -0.41
BMP4-204ENST00000558961 AMHR2Q16671 573 aa12.48□□□□□ -0.41
BMP4-204ENST00000558961 CTC1Q2NKJ3 1217 aa12.48□□□□□ -0.41
BMP4-204ENST00000558961 CDCA2Q69YH5 1023 aaPredicted RBP12.48□□□□□ -0.41
BMP4-204ENST00000558961 MRPL10Q7Z7H8 261 aaKnown RBP12.48□□□□□ -0.41
BMP4-204ENST00000558961 ABI1Q8IZP0 508 aa12.48□□□□□ -0.41
BMP4-204ENST00000558961 ASAP3Q8TDY4 903 aa12.48□□□□□ -0.41
BMP4-204ENST00000558961 ADAMTS19Q8TE59 1207 aa12.48□□□□□ -0.41
BMP4-204ENST00000558961 PABPC5Q96DU9 382 aaKnown RBP12.48□□□□□ -0.41
BMP4-204ENST00000558961 CCDC43Q96MW1 224 aaKnown RBP12.48□□□□□ -0.41
BMP4-204ENST00000558961 MRPL9Q9BYD2 267 aaKnown RBP12.48□□□□□ -0.41
BMP4-204ENST00000558961 RAB34Q9BZG1 259 aa12.48□□□□□ -0.41
BMP4-204ENST00000558961 POLR3FQ9H1D9 316 aaPredicted RBP12.48□□□□□ -0.41
BMP4-204ENST00000558961 FOXD4L1Q9NU39 408 aa12.48□□□□□ -0.41
BMP4-204ENST00000558961 LZTS1Q9Y250 596 aa12.48□□□□□ -0.41
BMP4-204ENST00000558961 PCDHB12Q9Y5F1 795 aa12.48□□□□□ -0.41
BMP4-204ENST00000558961 TDRD15B5MCY1 1934 aaKnown RBP12.48□□□□□ -0.41
BMP4-204ENST00000558961 MYH15Q9Y2K3 1946 aa12.48□□□□□ -0.41
BMP4-204ENST00000558961 H3BQV1 296 aa12.47□□□□□ -0.41
BMP4-204ENST00000558961 NCK2O43639 380 aa12.47□□□□□ -0.41
BMP4-204ENST00000558961 TSPAN1O60635 241 aa12.47□□□□□ -0.41
BMP4-204ENST00000558961 FGF18O76093 207 aa12.47□□□□□ -0.41
BMP4-204ENST00000558961 HSP90AA1P07900 732 aaKnown RBP12.47□□□□□ -0.41
BMP4-204ENST00000558961 IBSPP21815 317 aaPredicted RBP12.47□□□□□ -0.41
BMP4-204ENST00000558961 PPM1AP35813 382 aa12.47□□□□□ -0.41
BMP4-204ENST00000558961 NUCB2P80303 420 aa12.47□□□□□ -0.41
BMP4-204ENST00000558961 PLCB3Q01970 1234 aa12.47□□□□□ -0.41
BMP4-204ENST00000558961 HYAL1Q12794 435 aa12.47□□□□□ -0.41
BMP4-204ENST00000558961 LEXMQ3ZCV2 418 aa12.47□□□□□ -0.41
BMP4-204ENST00000558961 UBXN11Q5T124 520 aa12.47□□□□□ -0.41
BMP4-204ENST00000558961 ARL6IP4Q66PJ3 421 aaKnown RBP12.47□□□□□ -0.41
BMP4-204ENST00000558961 MCTP1Q6DN14 999 aa12.47□□□□□ -0.41
BMP4-204ENST00000558961 HELQQ8TDG4 1101 aa12.47□□□□□ -0.41
BMP4-204ENST00000558961 POF1BQ8WVV4 589 aa12.47□□□□□ -0.41
BMP4-204ENST00000558961 CCDC51Q96ER9 411 aa12.47□□□□□ -0.41
BMP4-204ENST00000558961 LRWD1Q9UFC0 647 aa12.47□□□□□ -0.41
BMP4-204ENST00000558961 MYO7AQ13402 2215 aa12.47□□□□□ -0.41
BMP4-204ENST00000558961 ZMYM2Q9UBW7 1377 aa12.46□□□□□ -0.41
BMP4-204ENST00000558961 CNTNAP2Q9UHC6 1331 aa12.46□□□□□ -0.41
BMP4-204ENST00000558961 CARNS1A5YM72 827 aa12.46□□□□□ -0.41
BMP4-204ENST00000558961 MEIS3P2A8K0S8 358 aa12.46□□□□□ -0.41
BMP4-204ENST00000558961 INPPL1O15357 1258 aa12.46□□□□□ -0.41
BMP4-204ENST00000558961 ERLIN2O94905 339 aa12.46□□□□□ -0.41
BMP4-204ENST00000558961 BRD1O95696 1058 aa12.46□□□□□ -0.41
BMP4-204ENST00000558961 CYP11B2P19099 503 aa12.46□□□□□ -0.41
BMP4-204ENST00000558961 IRS1P35568 1242 aa12.46□□□□□ -0.41
BMP4-204ENST00000558961 CCT6AP40227 531 aaKnown RBP12.46□□□□□ -0.41
BMP4-204ENST00000558961 FAM187BQ17R55 369 aa12.46□□□□□ -0.41
BMP4-204ENST00000558961 HYIQ5T013 277 aa12.46□□□□□ -0.41
BMP4-204ENST00000558961 LARP1BQ659C4 914 aaKnown RBP12.46□□□□□ -0.41
BMP4-204ENST00000558961 PDE12Q6L8Q7 609 aaKnown RBP12.46□□□□□ -0.41
BMP4-204ENST00000558961 NOTUMQ6P988 496 aa12.46□□□□□ -0.41
BMP4-204ENST00000558961 PADI6Q6TGC4 694 aa12.46□□□□□ -0.41
BMP4-204ENST00000558961 KCNT2Q6UVM3 1135 aa12.46□□□□□ -0.41
BMP4-204ENST00000558961 PPP4R3CPQ6ZMV5 832 aa12.46□□□□□ -0.41
BMP4-204ENST00000558961 AGMOQ6ZNB7 445 aa12.46□□□□□ -0.41
BMP4-204ENST00000558961 BRAPQ7Z569 592 aa12.46□□□□□ -0.41
BMP4-204ENST00000558961 KCTD17Q8N5Z5 321 aa12.46□□□□□ -0.41
BMP4-204ENST00000558961 CNNM3Q8NE01 707 aa12.46□□□□□ -0.41
BMP4-204ENST00000558961 SNX29Q8TEQ0 813 aa12.46□□□□□ -0.41
BMP4-204ENST00000558961 PGBD4Q96DM1 585 aa12.46□□□□□ -0.41
BMP4-204ENST00000558961 ZNF558Q96NG5 402 aa12.46□□□□□ -0.41
BMP4-204ENST00000558961 MMTAG2Q9BU76 263 aaKnown RBP12.46□□□□□ -0.41
BMP4-204ENST00000558961 GPRC5CQ9NQ84 441 aa12.46□□□□□ -0.41
BMP4-204ENST00000558961 TLR9Q9NR96 1032 aa12.46□□□□□ -0.41
BMP4-204ENST00000558961 PCDHB2Q9Y5E7 798 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms