RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 ANKLE1Q8NAG6 615 aa19.89■□□□□ 0.77
CLPX-203ENST00000558958 RNF214Q8ND24 703 aa19.89■□□□□ 0.77
CLPX-203ENST00000558958 ENOX1Q8TC92 643 aaKnown RBP19.89■□□□□ 0.77
CLPX-203ENST00000558958 NLRP4Q96MN2 994 aa19.89■□□□□ 0.77
CLPX-203ENST00000558958 TMEM106CQ9BVX2 250 aa19.89■□□□□ 0.77
CLPX-203ENST00000558958 NFKBIZQ9BYH8 718 aa19.89■□□□□ 0.77
CLPX-203ENST00000558958 TBX20Q9UMR3 447 aa19.89■□□□□ 0.77
CLPX-203ENST00000558958 IKBKBO14920 756 aa19.88■□□□□ 0.77
CLPX-203ENST00000558958 CAPN2P17655 700 aa19.88■□□□□ 0.77
CLPX-203ENST00000558958 GPC3P51654 580 aa19.88■□□□□ 0.77
CLPX-203ENST00000558958 EFNA5P52803 228 aa19.88■□□□□ 0.77
CLPX-203ENST00000558958 NLRP11P59045 1033 aaKnown RBP19.88■□□□□ 0.77
CLPX-203ENST00000558958 PTENP60484 403 aa19.88■□□□□ 0.77
CLPX-203ENST00000558958 ZCWPW2Q504Y3 356 aa19.88■□□□□ 0.77
CLPX-203ENST00000558958 TAS1R3Q7RTX0 852 aa19.88■□□□□ 0.77
CLPX-203ENST00000558958 RPAINQ86UA6 219 aa19.88■□□□□ 0.77
CLPX-203ENST00000558958 LUZP1Q86V48 1076 aa19.88■□□□□ 0.77
CLPX-203ENST00000558958 ZNF410Q86VK4 478 aa19.88■□□□□ 0.77
CLPX-203ENST00000558958 IFNLR1Q8IU57 520 aaPredicted RBP19.88■□□□□ 0.77
CLPX-203ENST00000558958 AOPEPQ8N6M6 819 aa19.88■□□□□ 0.77
CLPX-203ENST00000558958 ZNF668Q96K58 619 aaPredicted RBP19.88■□□□□ 0.77
CLPX-203ENST00000558958 ACCSQ96QU6 501 aa19.88■□□□□ 0.77
CLPX-203ENST00000558958 C2orf40Q9H1Z8 148 aa19.88■□□□□ 0.77
CLPX-203ENST00000558958 ADAMTS10Q9H324 1103 aa19.88■□□□□ 0.77
CLPX-203ENST00000558958 TMEM134Q9H6X4 195 aa19.88■□□□□ 0.77
CLPX-203ENST00000558958 IFT122Q9HBG6 1241 aa19.88■□□□□ 0.77
CLPX-203ENST00000558958 TRMT13Q9NUP7 481 aaKnown RBP19.88■□□□□ 0.77
CLPX-203ENST00000558958 A0A087WZ62 844 aa19.87■□□□□ 0.77
CLPX-203ENST00000558958 BICDL2A1A5D9 508 aa19.87■□□□□ 0.77
CLPX-203ENST00000558958 TRIM49BA6NDI0 452 aa19.87■□□□□ 0.77
CLPX-203ENST00000558958 GPR32O75388 356 aa19.87■□□□□ 0.77
CLPX-203ENST00000558958 RPLP2P05387 115 aaKnown RBP19.87■□□□□ 0.77
CLPX-203ENST00000558958 MYL5Q02045 173 aa19.87■□□□□ 0.77
CLPX-203ENST00000558958 NCAPHQ15003 741 aa19.87■□□□□ 0.77
CLPX-203ENST00000558958 ANKRD40Q6AI12 368 aa19.87■□□□□ 0.77
CLPX-203ENST00000558958 TTI2Q6NXR4 508 aa19.87■□□□□ 0.77
CLPX-203ENST00000558958 FOXR2Q6PJQ5 311 aa19.87■□□□□ 0.77
CLPX-203ENST00000558958 MAP4K3Q8IVH8 894 aa19.87■□□□□ 0.77
CLPX-203ENST00000558958 ZBTB8OSQ8IWT0 167 aa19.87■□□□□ 0.77
CLPX-203ENST00000558958 ZNF710Q8N1W2 664 aa19.87■□□□□ 0.77
CLPX-203ENST00000558958 PPP1R16BQ96T49 567 aa19.87■□□□□ 0.77
CLPX-203ENST00000558958 FDXACB1Q9BRP7 624 aaPredicted RBP19.87■□□□□ 0.77
CLPX-203ENST00000558958 SENP6Q9GZR1 1112 aaPredicted RBP19.87■□□□□ 0.77
CLPX-203ENST00000558958 CCDC113Q9H0I3 377 aa19.87■□□□□ 0.77
CLPX-203ENST00000558958 TMEM206Q9H813 350 aa19.87■□□□□ 0.77
CLPX-203ENST00000558958 ZMYM2Q9UBW7 1377 aa19.87■□□□□ 0.77
CLPX-203ENST00000558958 SMTNL1A8MU46 457 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 K7ERI5 159 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 PDXKO00764 312 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 COL6A1P12109 1028 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 PHKA2P46019 1235 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 LRRC63Q05C16 580 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 TMEM62Q0P6H9 643 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 PTK7Q13308 1070 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 GSE1Q14687 1217 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 NLRP7Q8WX94 980 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 WNT8BQ93098 351 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 TYW1Q9NV66 732 aaKnown RBP19.86■□□□□ 0.77
CLPX-203ENST00000558958 TRAF3IP3Q9Y228 551 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 PHLPP2Q6ZVD8 1323 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 FSD2A1L4K1 749 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 BECN2A8MW95 431 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 TGFB1I1O43294 461 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 B4GALT4O60513 344 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 STRN3Q13033 797 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 KIZQ2M2Z5 673 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 SPATA1Q5VX52 437 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 RSPH3Q86UC2 560 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 SYCP3Q8IZU3 236 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 DIS3LQ8TF46 1054 aaKnown RBP19.86■□□□□ 0.77
CLPX-203ENST00000558958 DUSP9Q99956 384 aaKnown RBP19.86■□□□□ 0.77
CLPX-203ENST00000558958 GBP3Q9H0R5 595 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 TRPV6Q9H1D0 765 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 IKZF4Q9H2S9 585 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 MINDY3Q9H8M7 445 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 EXOC7Q9UPT5 735 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 NOD1Q9Y239 953 aa19.86■□□□□ 0.77
CLPX-203ENST00000558958 KIAA0100Q14667 2235 aaKnown RBP19.85■□□□□ 0.77
CLPX-203ENST00000558958 MBTD1Q05BQ5 628 aa19.85■□□□□ 0.77
CLPX-203ENST00000558958 MAPK6Q16659 721 aa19.85■□□□□ 0.77
CLPX-203ENST00000558958 PPP4R3CPQ6ZMV5 832 aa19.85■□□□□ 0.77
CLPX-203ENST00000558958 DHX38Q92620 1227 aaKnown RBP19.85■□□□□ 0.77
CLPX-203ENST00000558958 SCLT1Q96NL6 688 aa19.85■□□□□ 0.77
CLPX-203ENST00000558958 TSG101Q99816 390 aa19.85■□□□□ 0.77
CLPX-203ENST00000558958 FZD8Q9H461 694 aa19.85■□□□□ 0.77
CLPX-203ENST00000558958 CDHR5Q9HBB8 845 aa19.85■□□□□ 0.77
CLPX-203ENST00000558958 NFE2L3Q9Y4A8 694 aa19.85■□□□□ 0.77
CLPX-203ENST00000558958 INO80B-WBP1J3KQ70 363 aa19.84■□□□□ 0.77
CLPX-203ENST00000558958 CALUO43852 315 aaPredicted RBP19.84■□□□□ 0.77
CLPX-203ENST00000558958 MRPS6P82932 125 aaKnown RBP19.84■□□□□ 0.77
CLPX-203ENST00000558958 TRIM71Q2Q1W2 868 aaKnown RBP19.84■□□□□ 0.77
CLPX-203ENST00000558958 EDRF1Q3B7T1 1238 aa19.84■□□□□ 0.77
CLPX-203ENST00000558958 SLC39A5Q6ZMH5 540 aa19.84■□□□□ 0.77
CLPX-203ENST00000558958 HS2ST1Q7LGA3 356 aa19.84■□□□□ 0.77
CLPX-203ENST00000558958 SRGAP1Q7Z6B7 1085 aa19.84■□□□□ 0.77
CLPX-203ENST00000558958 FAM126BQ8IXS8 530 aa19.84■□□□□ 0.77
CLPX-203ENST00000558958 GCOM2Q9BZD3 368 aaPredicted RBP19.84■□□□□ 0.77
CLPX-203ENST00000558958 INO80BQ9C086 356 aaPredicted RBP19.84■□□□□ 0.77
CLPX-203ENST00000558958 SIP14410 1827 aa19.83■□□□□ 0.77
CLPX-203ENST00000558958 GOLGA6L3A6NEY3 463 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms