RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 USO1O60763 962 aaKnown RBP13.28□□□□□ -0.28
HERC1-202ENST00000558324 OR52Z1P0C646 297 aa13.28□□□□□ -0.28
HERC1-202ENST00000558324 TECP42680 631 aa13.28□□□□□ -0.28
HERC1-202ENST00000558324 RARRES1P49788 294 aa13.28□□□□□ -0.28
HERC1-202ENST00000558324 RBM10P98175 930 aaKnown RBP13.28□□□□□ -0.28
HERC1-202ENST00000558324 UBE3AQ05086 875 aa13.28□□□□□ -0.28
HERC1-202ENST00000558324 ADAM15Q13444 863 aa13.28□□□□□ -0.28
HERC1-202ENST00000558324 NBR1Q14596 966 aa13.28□□□□□ -0.28
HERC1-202ENST00000558324 RABEP1Q15276 862 aa13.28□□□□□ -0.28
HERC1-202ENST00000558324 PUS10Q3MIT2 529 aaKnown RBP13.28□□□□□ -0.28
HERC1-202ENST00000558324 TTC38Q5R3I4 469 aa13.28□□□□□ -0.28
HERC1-202ENST00000558324 MAEAQ7L5Y9 396 aa13.28□□□□□ -0.28
HERC1-202ENST00000558324 SRGAP1Q7Z6B7 1085 aa13.28□□□□□ -0.28
HERC1-202ENST00000558324 MRPS27Q92552 414 aaKnown RBP13.28□□□□□ -0.28
HERC1-202ENST00000558324 KHSRPQ92945 711 aaKnown RBP eCLIP13.28□□□□□ -0.285e-7■■■□□ 18.9
HERC1-202ENST00000558324 TCF25Q9BQ70 676 aa13.28□□□□□ -0.28
HERC1-202ENST00000558324 MRPL9Q9BYD2 267 aaKnown RBP13.28□□□□□ -0.28
HERC1-202ENST00000558324 FOXP1Q9H334 677 aaPredicted RBP13.28□□□□□ -0.28
HERC1-202ENST00000558324 ENTPD7Q9NQZ7 604 aa13.28□□□□□ -0.28
HERC1-202ENST00000558324 BARX2Q9UMQ3 279 aaPredicted RBP13.28□□□□□ -0.28
HERC1-202ENST00000558324 NT5C1B-RDH14C9J2C7 533 aa13.27□□□□□ -0.29
HERC1-202ENST00000558324 ZC3H11AO75152 810 aaKnown RBP eCLIP13.27□□□□□ -0.29
HERC1-202ENST00000558324 ERLIN2O94905 339 aa13.27□□□□□ -0.29
HERC1-202ENST00000558324 LYPLA2O95372 231 aa13.27□□□□□ -0.29
HERC1-202ENST00000558324 GLP2RO95838 553 aa13.27□□□□□ -0.29
HERC1-202ENST00000558324 SKIP12755 728 aa13.27□□□□□ -0.29
HERC1-202ENST00000558324 CA8P35219 290 aa13.27□□□□□ -0.29
HERC1-202ENST00000558324 PPM1AP35813 382 aa13.27□□□□□ -0.29
HERC1-202ENST00000558324 RAB27AP51159 221 aa13.27□□□□□ -0.29
HERC1-202ENST00000558324 POTEGQ6S5H5 508 aa13.27□□□□□ -0.29
HERC1-202ENST00000558324 GLB1LQ6UWU2 654 aa13.27□□□□□ -0.29
HERC1-202ENST00000558324 NOSTRINQ8IVI9 506 aa13.27□□□□□ -0.29
HERC1-202ENST00000558324 GJD3Q8N144 294 aa13.27□□□□□ -0.29
HERC1-202ENST00000558324 EFHBQ8N7U6 833 aa13.27□□□□□ -0.29
HERC1-202ENST00000558324 ASAP3Q8TDY4 903 aa13.27□□□□□ -0.29
HERC1-202ENST00000558324 GBP3Q9H0R5 595 aa13.27□□□□□ -0.29
HERC1-202ENST00000558324 POLR3FQ9H1D9 316 aaPredicted RBP13.27□□□□□ -0.29
HERC1-202ENST00000558324 EPHX3Q9H6B9 360 aa13.27□□□□□ -0.29
HERC1-202ENST00000558324 UPF2Q9HAU5 1272 aaKnown RBP13.27□□□□□ -0.29
HERC1-202ENST00000558324 ANKEF1Q9NU02 776 aa13.27□□□□□ -0.29
HERC1-202ENST00000558324 SPG21Q9NZD8 308 aa13.27□□□□□ -0.29
HERC1-202ENST00000558324 PUF60Q9UHX1 559 aaKnown RBP13.27□□□□□ -0.29
HERC1-202ENST00000558324 CD207Q9UJ71 328 aa13.27□□□□□ -0.29
HERC1-202ENST00000558324 FAM50BQ9Y247 325 aa13.27□□□□□ -0.29
HERC1-202ENST00000558324 PCDHB2Q9Y5E7 798 aa13.27□□□□□ -0.29
HERC1-202ENST00000558324 BRWD1Q9NSI6 2320 aa13.27□□□□□ -0.29
HERC1-202ENST00000558324 INO80B-WBP1J3KQ70 363 aa13.26□□□□□ -0.29
HERC1-202ENST00000558324 ASAP2O43150 1006 aa13.26□□□□□ -0.29
HERC1-202ENST00000558324 MBTPS2O43462 519 aa13.26□□□□□ -0.29
HERC1-202ENST00000558324 ST18O60284 1047 aa13.26□□□□□ -0.29
HERC1-202ENST00000558324 MED24O75448 989 aa13.26□□□□□ -0.29
HERC1-202ENST00000558324 DGAT1O75907 488 aa13.26□□□□□ -0.29
HERC1-202ENST00000558324 SPATA31C1P0DKV0 1188 aa13.26□□□□□ -0.29
HERC1-202ENST00000558324 BCAR1P56945 870 aa13.26□□□□□ -0.29
HERC1-202ENST00000558324 PLCB3Q01970 1234 aa13.26□□□□□ -0.29
HERC1-202ENST00000558324 KRT17Q04695 432 aa13.26□□□□□ -0.29
HERC1-202ENST00000558324 RNASELQ05823 741 aaKnown RBP13.26□□□□□ -0.29
HERC1-202ENST00000558324 SMAD4Q13485 552 aaKnown RBP13.26□□□□□ -0.29
HERC1-202ENST00000558324 CAPSQ13938 189 aa13.26□□□□□ -0.29
HERC1-202ENST00000558324 TFDP1Q14186 410 aa13.26□□□□□ -0.29
HERC1-202ENST00000558324 MXD4Q14582 209 aaPredicted RBP13.26□□□□□ -0.29
HERC1-202ENST00000558324 CATSPER3Q86XQ3 398 aa13.26□□□□□ -0.29
HERC1-202ENST00000558324 SLC39A11Q8N1S5 342 aa13.26□□□□□ -0.29
HERC1-202ENST00000558324 TRAIPQ9BWF2 469 aa13.26□□□□□ -0.29
HERC1-202ENST00000558324 GPRC5CQ9NQ84 441 aa13.26□□□□□ -0.29
HERC1-202ENST00000558324 TBC1D13Q9NVG8 400 aa13.26□□□□□ -0.29
HERC1-202ENST00000558324 CLEC1BQ9P126 229 aa13.26□□□□□ -0.29
HERC1-202ENST00000558324 NOL7Q9UMY1 257 aaKnown RBP13.26□□□□□ -0.29
HERC1-202ENST00000558324 LZTS1Q9Y250 596 aa13.26□□□□□ -0.29
HERC1-202ENST00000558324 MYO7AQ13402 2215 aa13.25□□□□□ -0.29
HERC1-202ENST00000558324 HIDE1A8MVS5 230 aa13.25□□□□□ -0.29
HERC1-202ENST00000558324 FSCN2O14926 492 aa13.25□□□□□ -0.29
HERC1-202ENST00000558324 TSPAN1O60635 241 aa13.25□□□□□ -0.29
HERC1-202ENST00000558324 OFD1O75665 1012 aa13.25□□□□□ -0.29
HERC1-202ENST00000558324 CD2BP2O95400 341 aaKnown RBP13.25□□□□□ -0.29
HERC1-202ENST00000558324 GLRA2P23416 452 aa13.25□□□□□ -0.29
HERC1-202ENST00000558324 HOXA11P31270 313 aaPredicted RBP13.25□□□□□ -0.29
HERC1-202ENST00000558324 ARL2P36404 184 aa13.25□□□□□ -0.29
HERC1-202ENST00000558324 ALDH7A1P49419 539 aaKnown RBP13.25□□□□□ -0.29
HERC1-202ENST00000558324 PTENP60484 403 aa13.25□□□□□ -0.29
HERC1-202ENST00000558324 ZP2Q05996 745 aa13.25□□□□□ -0.29
HERC1-202ENST00000558324 DUSP6Q16828 381 aa13.25□□□□□ -0.29
HERC1-202ENST00000558324 NOMO2Q5JPE7 1267 aa13.25□□□□□ -0.29
HERC1-202ENST00000558324 UBXN11Q5T124 520 aa13.25□□□□□ -0.29
HERC1-202ENST00000558324 LLGL2Q6P1M3 1020 aa13.25□□□□□ -0.29
HERC1-202ENST00000558324 TMC7Q7Z402 723 aa13.25□□□□□ -0.29
HERC1-202ENST00000558324 TMEM173Q86WV6 379 aaPredicted RBP13.25□□□□□ -0.29
HERC1-202ENST00000558324 VN1R2Q8NFZ6 395 aa13.25□□□□□ -0.29
HERC1-202ENST00000558324 ERMNQ8TAM6 284 aa13.25□□□□□ -0.29
HERC1-202ENST00000558324 PGBD4Q96DM1 585 aa13.25□□□□□ -0.29
HERC1-202ENST00000558324 CPB2Q96IY4 423 aa13.25□□□□□ -0.29
HERC1-202ENST00000558324 TUFT1Q9NNX1 390 aa13.25□□□□□ -0.29
HERC1-202ENST00000558324 FAM86C2PA6NEL3 165 aa13.24□□□□□ -0.29
HERC1-202ENST00000558324 LRRIQ4A6NIV6 560 aa13.24□□□□□ -0.29
HERC1-202ENST00000558324 ZNF623O75123 536 aa13.24□□□□□ -0.29
HERC1-202ENST00000558324 AFF1P51825 1210 aaKnown RBP13.24□□□□□ -0.29
HERC1-202ENST00000558324 MBTD1Q05BQ5 628 aa13.24□□□□□ -0.29
HERC1-202ENST00000558324 ORC2Q13416 577 aaPredicted RBP13.24□□□□□ -0.29
HERC1-202ENST00000558324 SMAD2Q15796 467 aaKnown RBP13.24□□□□□ -0.29
HERC1-202ENST00000558324 MCTP1Q6DN14 999 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms