RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 ANKRD40Q6AI12 368 aa12.68□□□□□ -0.38
RORA-207ENST00000558234 SCFD1Q8WVM8 642 aa12.68□□□□□ -0.38
RORA-207ENST00000558234 TMEM40Q8WWA1 233 aa12.68□□□□□ -0.38
RORA-207ENST00000558234 NLRC5Q86WI3 1866 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 RSPH10B2B2RC85 870 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 RSPH10BP0C881 870 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 CKBP12277 381 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 CASP5P51878 434 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 SOX10P56693 466 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 MIIPQ5JXC2 388 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 PPP4R3CPQ6ZMV5 832 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 CEP170P1Q96L14 293 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 SH2D3AQ9BRG2 576 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 PRO3102Q9H379 93 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 RTN4Q9NQC3 1192 aaKnown RBP12.67□□□□□ -0.38
RORA-207ENST00000558234 TRIM49BA6NDI0 452 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 PAK1Q13153 545 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 IER5Q5VY09 327 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 C7orf31Q8N865 590 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 CAGE1Q8TC20 777 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 THAP9Q9H5L6 903 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 CDHR5Q9HBB8 845 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 TCEAL9Q9UHQ7 104 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 FAM189A1O60320 539 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 HIP1RO75146 1068 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 PIGRP01833 764 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 PROZP22891 400 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 CCNE1P24864 410 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 MTERF2Q49AM1 385 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 VSTM4Q8IW00 320 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 MCPH1Q8NEM0 835 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 NELFBQ8WX92 580 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 LRRC27Q9C0I9 530 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 GPRC5CQ9NQ84 441 aa12.67□□□□□ -0.38
RORA-207ENST00000558234 MBTD1Q05BQ5 628 aa12.66□□□□□ -0.38
RORA-207ENST00000558234 IMPACTQ9P2X3 320 aa12.66□□□□□ -0.38
RORA-207ENST00000558234 CTNND2Q9UQB3 1225 aa12.66□□□□□ -0.38
RORA-207ENST00000558234 PPP1R2P41236 205 aa12.66□□□□□ -0.38
RORA-207ENST00000558234 EFCAB12Q6NXP0 572 aa12.66□□□□□ -0.38
RORA-207ENST00000558234 ZNF410Q86VK4 478 aa12.66□□□□□ -0.38
RORA-207ENST00000558234 TMEM161BQ8NDZ6 487 aa12.66□□□□□ -0.38
RORA-207ENST00000558234 BORCS6Q96GS4 357 aa12.66□□□□□ -0.38
RORA-207ENST00000558234 FZD8Q9H461 694 aa12.66□□□□□ -0.38
RORA-207ENST00000558234 PTPRHQ9HD43 1115 aa12.66□□□□□ -0.38
RORA-207ENST00000558234 UMODL1Q5DID0 1318 aa12.66□□□□□ -0.38
RORA-207ENST00000558234 ITIH6Q6UXX5 1313 aa12.66□□□□□ -0.38
RORA-207ENST00000558234 GNAT1P11488 350 aa12.66□□□□□ -0.38
RORA-207ENST00000558234 PLS3P13797 630 aa12.66□□□□□ -0.38
RORA-207ENST00000558234 SCP2P22307 547 aa12.66□□□□□ -0.38
RORA-207ENST00000558234 DSC3Q14574 896 aa12.66□□□□□ -0.38
RORA-207ENST00000558234 XKR9Q5GH70 373 aa12.66□□□□□ -0.38
RORA-207ENST00000558234 TCP11X2Q5H9J9 407 aa12.66□□□□□ -0.38
RORA-207ENST00000558234 P2RX5Q93086 422 aa12.66□□□□□ -0.38
RORA-207ENST00000558234 TRAIPQ9BWF2 469 aa12.66□□□□□ -0.38
RORA-207ENST00000558234 TRPC6Q9Y210 931 aa12.66□□□□□ -0.38
RORA-207ENST00000558234 MYCP01106 439 aaPredicted RBP12.65□□□□□ -0.38
RORA-207ENST00000558234 NAMPTP43490 491 aa12.65□□□□□ -0.38
RORA-207ENST00000558234 CCZ1BP86790 482 aa12.65□□□□□ -0.38
RORA-207ENST00000558234 CCZ1P86791 482 aaPredicted RBP12.65□□□□□ -0.38
RORA-207ENST00000558234 GTF2BQ00403 316 aa12.65□□□□□ -0.38
RORA-207ENST00000558234 LAMTOR4Q0VGL1 99 aa12.65□□□□□ -0.38
RORA-207ENST00000558234 TNS4Q8IZW8 715 aa12.65□□□□□ -0.38
RORA-207ENST00000558234 KIFAP3Q92845 792 aa12.65□□□□□ -0.38
RORA-207ENST00000558234 CCDC34Q96HJ3 373 aa12.65□□□□□ -0.38
RORA-207ENST00000558234 MINDY3Q9H8M7 445 aa12.65□□□□□ -0.38
RORA-207ENST00000558234 TRAF3IP3Q9Y228 551 aa12.65□□□□□ -0.38
RORA-207ENST00000558234 ZNF500O60304 480 aaPredicted RBP12.65□□□□□ -0.38
RORA-207ENST00000558234 MARCH6O60337 910 aa12.65□□□□□ -0.38
RORA-207ENST00000558234 NBNO60934 754 aa12.65□□□□□ -0.38
RORA-207ENST00000558234 CLCN3P51790 818 aa12.65□□□□□ -0.38
RORA-207ENST00000558234 MRPS6P82932 125 aaKnown RBP12.65□□□□□ -0.38
RORA-207ENST00000558234 TLE2Q04725 743 aa12.65□□□□□ -0.38
RORA-207ENST00000558234 RASIP1Q5U651 963 aa12.65□□□□□ -0.38
RORA-207ENST00000558234 ARMCX5Q6P1M9 558 aa12.65□□□□□ -0.38
RORA-207ENST00000558234 GPBP1Q86WP2 473 aa12.65□□□□□ -0.38
RORA-207ENST00000558234 TTYH3Q9C0H2 523 aa12.65□□□□□ -0.38
RORA-207ENST00000558234 ZKSCAN5Q9Y2L8 839 aa12.65□□□□□ -0.38
RORA-207ENST00000558234 STYXL1Q9Y6J8 313 aa12.65□□□□□ -0.38
RORA-207ENST00000558234 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.65□□□□□ -0.38
RORA-207ENST00000558234 PTENP60484 403 aa12.65□□□□□ -0.39
RORA-207ENST00000558234 JPH2Q9BR39 696 aaPredicted RBP12.65□□□□□ -0.39
RORA-207ENST00000558234 TMEM134Q9H6X4 195 aa12.65□□□□□ -0.39
RORA-207ENST00000558234 RRAGDQ9NQL2 400 aaPredicted RBP12.65□□□□□ -0.39
RORA-207ENST00000558234 IFNKQ9P0W0 207 aa12.65□□□□□ -0.39
RORA-207ENST00000558234 CLTBP09497 229 aa12.64□□□□□ -0.39
RORA-207ENST00000558234 TCP11Q8WWU5 503 aa12.64□□□□□ -0.39
RORA-207ENST00000558234 PRPF31Q8WWY3 499 aaKnown RBP12.64□□□□□ -0.39
RORA-207ENST00000558234 POLR3FQ9H1D9 316 aaPredicted RBP12.64□□□□□ -0.39
RORA-207ENST00000558234 ERVK-5Q9HDB9 667 aa12.64□□□□□ -0.39
RORA-207ENST00000558234 PANK4Q9NVE7 773 aa12.64□□□□□ -0.39
RORA-207ENST00000558234 SEL1LQ9UBV2 794 aa12.64□□□□□ -0.39
RORA-207ENST00000558234 COL4A4P53420 1690 aaPredicted RBP12.64□□□□□ -0.39
RORA-207ENST00000558234 TDRD15B5MCY1 1934 aaKnown RBP12.64□□□□□ -0.39
RORA-207ENST00000558234 ARHGEF35A5YM69 484 aa12.64□□□□□ -0.39
RORA-207ENST00000558234 ASAP2O43150 1006 aa12.64□□□□□ -0.39
RORA-207ENST00000558234 CRYBB1P53674 252 aaPredicted RBP12.64□□□□□ -0.39
RORA-207ENST00000558234 FBXO47Q5MNV8 452 aa12.64□□□□□ -0.39
RORA-207ENST00000558234 ZNF618Q5T7W0 954 aa12.64□□□□□ -0.39
RORA-207ENST00000558234 LRRC71Q8N4P6 559 aa12.64□□□□□ -0.39
RORA-207ENST00000558234 TRIP11Q15643 1979 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms