RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 PSAPP07602 524 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 CYP21A2P08686 494 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 SRFP11831 508 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 ATP4AP20648 1035 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 CLCN4P51793 760 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 ATXN1P54253 815 aaKnown RBP5.87□□□□□ -1.47
SPG11-208ENST00000558155 RNASELQ05823 741 aaKnown RBP5.87□□□□□ -1.47
SPG11-208ENST00000558155 ITGB3BPQ13352 177 aaPredicted RBP5.87□□□□□ -1.47
SPG11-208ENST00000558155 PTPN14Q15678 1187 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 NOMO2Q5JPE7 1267 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 DCLRE1AQ6PJP8 1040 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 GLB1LQ6UWU2 654 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 NFXL1Q6ZNB6 911 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 NIPA1Q7RTP0 329 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 TRMT1LQ7Z2T5 733 aaKnown RBP5.87□□□□□ -1.47
SPG11-208ENST00000558155 ZNF598Q86UK7 904 aaKnown RBP5.87□□□□□ -1.47
SPG11-208ENST00000558155 PLA2G4DQ86XP0 818 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 SUMF1Q8NBK3 374 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 CMASQ8NFW8 434 aaPredicted RBP5.87□□□□□ -1.47
SPG11-208ENST00000558155 ATRIPQ8WXE1 791 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 WNT2BQ93097 391 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 FAM167AQ96KS9 214 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 SCLT1Q96NL6 688 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 FAM193BQ96PV7 902 aaPredicted RBP5.87□□□□□ -1.47
SPG11-208ENST00000558155 RHOBTB2Q9BYZ6 727 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 GCOM2Q9BZD3 368 aaPredicted RBP5.87□□□□□ -1.47
SPG11-208ENST00000558155 INO80BQ9C086 356 aaPredicted RBP5.87□□□□□ -1.47
SPG11-208ENST00000558155 GLT8D2Q9H1C3 349 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 ADAMTS10Q9H324 1103 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 NRDE2Q9H7Z3 1164 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 WDR6Q9NNW5 1121 aaKnown RBP5.87□□□□□ -1.47
SPG11-208ENST00000558155 MRPL17Q9NRX2 175 aaKnown RBP5.87□□□□□ -1.47
SPG11-208ENST00000558155 TBC1D22BQ9NU19 505 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.87□□□□□ -1.47
SPG11-208ENST00000558155 NCDNQ9UBB6 729 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 TCEAL9Q9UHQ7 104 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 PCDHA10Q9Y5I2 948 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 MAFBQ9Y5Q3 323 aaPredicted RBP5.87□□□□□ -1.47
SPG11-208ENST00000558155 FANCMQ8IYD8 2048 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 CACNA1IQ9P0X4 2223 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 USP34Q70CQ2 3546 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 IPO5O00410 1097 aaKnown RBP5.86□□□□□ -1.47
SPG11-208ENST00000558155 LCE2BO14633 110 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 LAMTOR5O43504 91 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 PLEKHA8P1O95397 391 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 CNPP09543 421 aaKnown RBP5.86□□□□□ -1.47
SPG11-208ENST00000558155 DARSP14868 501 aaKnown RBP5.86□□□□□ -1.47
SPG11-208ENST00000558155 GPC3P51654 580 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 CLCN3P51790 818 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 AAMPQ13685 434 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 ZNF528Q3MIS6 628 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 TWF2Q6IBS0 349 aaKnown RBP5.86□□□□□ -1.47
SPG11-208ENST00000558155 ZNF746Q6NUN9 644 aaPredicted RBP5.86□□□□□ -1.47
SPG11-208ENST00000558155 SYNE3Q6ZMZ3 975 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 HEATR3Q7Z4Q2 680 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 CHD1LQ86WJ1 897 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 CCDC60Q8IWA6 550 aaPredicted RBP5.86□□□□□ -1.47
SPG11-208ENST00000558155 SMC5Q8IY18 1101 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 SMAP1Q8IYB5 467 aaPredicted RBP5.86□□□□□ -1.47
SPG11-208ENST00000558155 CMTR1Q8N1G2 835 aaKnown RBP5.86□□□□□ -1.47
SPG11-208ENST00000558155 CCDC82Q8N4S0 544 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 FANCBQ8NB91 859 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 HDAC7Q8WUI4 952 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 NLRP7Q8WX94 980 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 RSAD2Q8WXG1 361 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 PGBD4Q96DM1 585 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 CHAMP1Q96JM3 812 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 TMEM87BQ96K49 555 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 RTKNQ9BST9 563 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 MYL10Q9BUA6 226 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 TRAIPQ9BWF2 469 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 BCO2Q9BYV7 579 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 PIDD1Q9HB75 910 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 LY9Q9HBG7 655 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 RIC8AQ9NPQ8 531 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 DLGAP2Q9P1A6 1054 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 KANSL3Q9P2N6 904 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 EPS15L1Q9UBC2 864 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 GABBR1Q9UBS5 961 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 CDV3Q9UKY7 258 aaKnown RBP5.86□□□□□ -1.47
SPG11-208ENST00000558155 FAN1Q9Y2M0 1017 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 SLC12A7Q9Y666 1083 aa5.86□□□□□ -1.47
SPG11-208ENST00000558155 TPRP12270 2363 aaKnown RBP5.86□□□□□ -1.47
SPG11-208ENST00000558155 hCG_1642624A0A1W2PR95 340 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 SMCO2A6NFE2 343 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 SPTLC1O15269 473 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 INPPL1O15357 1258 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 DHX15O43143 795 aaKnown RBP5.85□□□□□ -1.47
SPG11-208ENST00000558155 GAS2O43903 313 aaKnown RBP5.85□□□□□ -1.47
SPG11-208ENST00000558155 TBC1D4O60343 1298 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 LILRB3O75022 631 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 ZNF623O75123 536 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 OFD1O75665 1012 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 C1RP00736 705 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 SSBP05455 408 aaKnown RBP eCLIP5.85□□□□□ -1.47
SPG11-208ENST00000558155 ADH1AP07327 375 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 LAMP2P13473 410 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 FGFR4P22455 802 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 SFPQP23246 707 aaKnown RBP eCLIP5.85□□□□□ -1.47
SPG11-208ENST00000558155 MCM5P33992 734 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms