RNA–Protein interactions for RNA: ENST00000558088.1

VPS13C-205, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-205ENST00000558088 KCNA6P17658 529 aa4.11□□□□□ -1.75
VPS13C-205ENST00000558088 LAG3P18627 525 aa4.11□□□□□ -1.75
VPS13C-205ENST00000558088 HK1P19367 917 aa4.11□□□□□ -1.75
VPS13C-205ENST00000558088 FBLP22087 321 aaKnown RBP4.11□□□□□ -1.75
VPS13C-205ENST00000558088 IGFALSP35858 605 aa4.11□□□□□ -1.75
VPS13C-205ENST00000558088 FLT3P36888 993 aa4.11□□□□□ -1.75
VPS13C-205ENST00000558088 ADCY2Q08462 1091 aa4.11□□□□□ -1.75
VPS13C-205ENST00000558088 PLEKHG4Q58EX7 1191 aa4.11□□□□□ -1.75
VPS13C-205ENST00000558088 RHOUQ7L0Q8 258 aa4.11□□□□□ -1.75
VPS13C-205ENST00000558088 ZNF428Q96B54 188 aa4.11□□□□□ -1.75
VPS13C-205ENST00000558088 ARMC5Q96C12 935 aa4.11□□□□□ -1.75
VPS13C-205ENST00000558088 CPPED1Q9BRF8 314 aaPredicted RBP4.11□□□□□ -1.75
VPS13C-205ENST00000558088 MLST8Q9BVC4 326 aa4.11□□□□□ -1.75
VPS13C-205ENST00000558088 OSBPL6Q9BZF3 934 aa4.11□□□□□ -1.75
VPS13C-205ENST00000558088 MTG2Q9H4K7 406 aa4.11□□□□□ -1.75
VPS13C-205ENST00000558088 NCOA5Q9HCD5 579 aaKnown RBP4.11□□□□□ -1.75
VPS13C-205ENST00000558088 TRIM39Q9HCM9 518 aa4.11□□□□□ -1.75
VPS13C-205ENST00000558088 HDAC5Q9UQL6 1122 aa4.11□□□□□ -1.75
VPS13C-205ENST00000558088 TNFRSF18Q9Y5U5 241 aa4.11□□□□□ -1.75
VPS13C-205ENST00000558088 FAM221BA6H8Z2 402 aa4.1□□□□□ -1.75
VPS13C-205ENST00000558088 ZAR1LA6NP61 321 aa4.1□□□□□ -1.75
VPS13C-205ENST00000558088 OPA1O60313 960 aa4.1□□□□□ -1.75
VPS13C-205ENST00000558088 ASLP04424 464 aa4.1□□□□□ -1.75
VPS13C-205ENST00000558088 PROZP22891 400 aa4.1□□□□□ -1.75
VPS13C-205ENST00000558088 MECP2P51608 486 aaKnown RBP4.1□□□□□ -1.75
VPS13C-205ENST00000558088 USP14P54578 494 aa4.1□□□□□ -1.75
VPS13C-205ENST00000558088 TAP1Q03518 808 aa4.1□□□□□ -1.75
VPS13C-205ENST00000558088 SERINC3Q13530 473 aa4.1□□□□□ -1.75
VPS13C-205ENST00000558088 SOGA3Q5TF21 947 aa4.1□□□□□ -1.75
VPS13C-205ENST00000558088 HECTD2Q5U5R9 776 aa4.1□□□□□ -1.75
VPS13C-205ENST00000558088 IQSEC1Q6DN90 963 aa4.1□□□□□ -1.75
VPS13C-205ENST00000558088 PHYKPLQ8IUZ5 450 aa4.1□□□□□ -1.75
VPS13C-205ENST00000558088 GLB1L3Q8NCI6 653 aaPredicted RBP4.1□□□□□ -1.75
VPS13C-205ENST00000558088 GPR150Q8NGU9 434 aa4.1□□□□□ -1.75
VPS13C-205ENST00000558088 HIST1H2AHQ96KK5 128 aa4.1□□□□□ -1.75
VPS13C-205ENST00000558088 C16orf92Q96LL3 132 aa4.1□□□□□ -1.75
VPS13C-205ENST00000558088 HIST1H2AJQ99878 128 aa4.1□□□□□ -1.75
VPS13C-205ENST00000558088 NOL10Q9BSC4 688 aaKnown RBP4.1□□□□□ -1.75
VPS13C-205ENST00000558088 HAPLN2Q9GZV7 340 aa4.1□□□□□ -1.75
VPS13C-205ENST00000558088 TOR3AQ9H497 397 aa4.1□□□□□ -1.75
VPS13C-205ENST00000558088 A0A0A6YYJ9 748 aa4.09□□□□□ -1.75
VPS13C-205ENST00000558088 PLD2O14939 933 aa4.09□□□□□ -1.75
VPS13C-205ENST00000558088 GLRX3O76003 335 aaKnown RBP4.09□□□□□ -1.75
VPS13C-205ENST00000558088 MYBPC3Q14896 1274 aa4.09□□□□□ -1.75
VPS13C-205ENST00000558088 C2orf27AQ580R0 203 aa4.09□□□□□ -1.75
VPS13C-205ENST00000558088 METTL24Q5JXM2 366 aa4.09□□□□□ -1.75
VPS13C-205ENST00000558088 C1QL3Q5VWW1 255 aa4.09□□□□□ -1.75
VPS13C-205ENST00000558088 UBE2R2Q712K3 238 aaPredicted RBP4.09□□□□□ -1.75
VPS13C-205ENST00000558088 FAM83AQ86UY5 434 aa4.09□□□□□ -1.75
VPS13C-205ENST00000558088 ZZZ3Q8IYH5 903 aa4.09□□□□□ -1.75
VPS13C-205ENST00000558088 SUPT20HQ8NEM7 779 aa4.09□□□□□ -1.75
VPS13C-205ENST00000558088 OR5M3Q8NGP4 307 aa4.09□□□□□ -1.75
VPS13C-205ENST00000558088 ZNF764Q96H86 408 aaPredicted RBP4.09□□□□□ -1.75
VPS13C-205ENST00000558088 SLC46A2Q9BY10 475 aa4.09□□□□□ -1.75
VPS13C-205ENST00000558088 PITHD1Q9GZP4 211 aaPredicted RBP4.09□□□□□ -1.75
VPS13C-205ENST00000558088 PTCH2Q9Y6C5 1203 aa4.09□□□□□ -1.75
VPS13C-205ENST00000558088 ST20-MTHFSA0A0A6YYL1 179 aa4.08□□□□□ -1.76
VPS13C-205ENST00000558088 GRXCR1A8MXD5 290 aa4.08□□□□□ -1.76
VPS13C-205ENST00000558088 E9PSI1 815 aa4.08□□□□□ -1.76
VPS13C-205ENST00000558088 MASP2O00187 686 aa4.08□□□□□ -1.76
VPS13C-205ENST00000558088 DVL2O14641 736 aa4.08□□□□□ -1.76
VPS13C-205ENST00000558088 HOXA3O43365 443 aaPredicted RBP4.08□□□□□ -1.76
VPS13C-205ENST00000558088 PRPF6O94906 941 aaKnown RBP4.08□□□□□ -1.76
VPS13C-205ENST00000558088 PTX3P26022 381 aaPredicted RBP4.08□□□□□ -1.76
VPS13C-205ENST00000558088 CD38P28907 300 aa4.08□□□□□ -1.76
VPS13C-205ENST00000558088 AVPR1BP47901 424 aa4.08□□□□□ -1.76
VPS13C-205ENST00000558088 WNT3AP56704 352 aa4.08□□□□□ -1.76
VPS13C-205ENST00000558088 FAM214AQ32MH5 1076 aa4.08□□□□□ -1.76
VPS13C-205ENST00000558088 KIAA1841Q6NSI8 718 aa4.08□□□□□ -1.76
VPS13C-205ENST00000558088 SYCE2Q6PIF2 218 aa4.08□□□□□ -1.76
VPS13C-205ENST00000558088 PRIMA1Q86XR5 153 aa4.08□□□□□ -1.76
VPS13C-205ENST00000558088 ADGRG3Q86Y34 549 aa4.08□□□□□ -1.76
VPS13C-205ENST00000558088 LCORLQ8N3X6 602 aa4.08□□□□□ -1.76
VPS13C-205ENST00000558088 JMYQ8N9B5 988 aa4.08□□□□□ -1.76
VPS13C-205ENST00000558088 PDCD2LQ9BRP1 358 aa4.08□□□□□ -1.76
VPS13C-205ENST00000558088 MYL10Q9BUA6 226 aa4.08□□□□□ -1.76
VPS13C-205ENST00000558088 KCNH6Q9H252 994 aa4.08□□□□□ -1.76
VPS13C-205ENST00000558088 ADARB2Q9NS39 739 aaKnown RBP4.08□□□□□ -1.76
VPS13C-205ENST00000558088 TOMM22Q9NS69 142 aa4.08□□□□□ -1.76
VPS13C-205ENST00000558088 CLCA2Q9UQC9 943 aa4.08□□□□□ -1.76
VPS13C-205ENST00000558088 HS3ST4Q9Y661 456 aa4.08□□□□□ -1.76
VPS13C-205ENST00000558088 PCSK5Q92824 1860 aa4.07□□□□□ -1.76
VPS13C-205ENST00000558088 GRID2IPA4D2P6 1211 aa4.07□□□□□ -1.76
VPS13C-205ENST00000558088 OPHN1O60890 802 aa4.07□□□□□ -1.76
VPS13C-205ENST00000558088 DNAJC6O75061 913 aa4.07□□□□□ -1.76
VPS13C-205ENST00000558088 STC2O76061 302 aa4.07□□□□□ -1.76
VPS13C-205ENST00000558088 ALDH1A2O94788 518 aa4.07□□□□□ -1.76
VPS13C-205ENST00000558088 RAPGEF3O95398 923 aa4.07□□□□□ -1.76
VPS13C-205ENST00000558088 NR4A1P22736 598 aa4.07□□□□□ -1.76
VPS13C-205ENST00000558088 CSRP2Q16527 193 aa4.07□□□□□ -1.76
VPS13C-205ENST00000558088 ERCC6LQ2NKX8 1250 aa4.07□□□□□ -1.76
VPS13C-205ENST00000558088 PIK3R6Q5UE93 754 aa4.07□□□□□ -1.76
VPS13C-205ENST00000558088 UNC5BQ8IZJ1 945 aa4.07□□□□□ -1.76
VPS13C-205ENST00000558088 MKL1Q969V6 931 aa4.07□□□□□ -1.76
VPS13C-205ENST00000558088 MYEOVQ96EZ4 313 aa4.07□□□□□ -1.76
VPS13C-205ENST00000558088 IL17RAQ96F46 866 aa4.07□□□□□ -1.76
VPS13C-205ENST00000558088 DCLRE1CQ96SD1 692 aaKnown RBP4.07□□□□□ -1.76
VPS13C-205ENST00000558088 POFUT1Q9H488 388 aa4.07□□□□□ -1.76
VPS13C-205ENST00000558088 WDR26Q9H7D7 661 aa4.07□□□□□ -1.76
VPS13C-205ENST00000558088 B4GALT6Q9UBX8 382 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms