RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 SLC15A2Q16348 729 aa12.76□□□□□ -0.37
VIPAS39-211ENST00000557658 RINT1Q6NUQ1 792 aa12.76□□□□□ -0.37
VIPAS39-211ENST00000557658 MYCT1Q8N699 235 aa12.76□□□□□ -0.37
VIPAS39-211ENST00000557658 BCAS3Q9H6U6 928 aa12.76□□□□□ -0.37
VIPAS39-211ENST00000557658 TAS2R14Q9NYV8 317 aa12.76□□□□□ -0.37
VIPAS39-211ENST00000557658 FRMD4BQ9Y2L6 1034 aa12.76□□□□□ -0.37
VIPAS39-211ENST00000557658 GREB1LQ9C091 1923 aaPredicted RBP12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 PFASO15067 1338 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 SFI1A8K8P3 1242 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 FOSP01100 380 aaPredicted RBP12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 HLA-DOAP06340 250 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 NMT1P30419 496 aaKnown RBP12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 MYL7Q01449 175 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 RIPK1Q13546 671 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 KIF22Q14807 665 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 PPP2R5AQ15172 486 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 ARHGAP44Q17R89 818 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 HS2ST1Q7LGA3 356 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 PRELID2Q8N945 189 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 DCAF4Q8WV16 495 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 AGPAT1Q99943 283 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 EIF2AK1Q9BQI3 630 aaKnown RBP12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 CTTNBP2NLQ9P2B4 639 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 AFF2P51816 1311 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 FAM86B1E9PN63 330 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 RASGRF2O14827 1237 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 MSH4O15457 936 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 FAM86B2P0C5J1 330 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 RFX1P22670 979 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 CTNNA2P26232 953 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 SREBF1P36956 1147 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 GTF2IP78347 998 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 CBWD6Q4V339 395 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 CBWD3Q5JTY5 395 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 CBWD5Q5RIA9 395 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 SEL1L2Q5TEA6 688 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 CRELD2Q6UXH1 353 aaPredicted RBP12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 EPS8L3Q8TE67 593 aaKnown RBP12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 TCP11Q8WWU5 503 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 RUNDC3BQ96NL0 473 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 P2RX7Q99572 595 aaKnown RBP12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 ZSWIM1Q9BR11 485 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 CCDC113Q9H0I3 377 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 VAV3Q9UKW4 847 aa12.75□□□□□ -0.37
VIPAS39-211ENST00000557658 UBE4BO95155 1302 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 RIPK2O43353 540 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 RARGP13631 454 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 IFNAR2P48551 515 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 MMP14P50281 582 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 PDE6CP51160 858 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 CTTNQ14247 550 aaKnown RBP12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 CHADLQ6NUI6 762 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 AADACL2Q6P093 401 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 CCDC137Q6PK04 289 aaKnown RBP12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 STXBP4Q6ZWJ1 553 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 PALB2Q86YC2 1186 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 UHMK1Q8TAS1 419 aaKnown RBP12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 CCHCR1Q8TD31 782 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 MIEF2Q96C03 454 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 CCDC17Q96LX7 622 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 AMNQ9BXJ7 453 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 IKZF4Q9H2S9 585 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 HOMER3Q9NSC5 361 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 USP40Q9NVE5 1235 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 A0A1B0GUA9 196 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 CLTAP09496 248 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 TRIM49P0CI25 452 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 TRIM49CP0CI26 452 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 FGFR4P22455 802 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 GBP2P32456 591 aaPredicted RBP12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 SLCO1A2P46721 670 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 CYP2J2P51589 502 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 CLNS1AP54105 237 aaKnown RBP12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 SF3A3Q12874 501 aaKnown RBP eCLIP12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 AUHQ13825 339 aaKnown RBP12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 TCEAL1Q15170 157 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 CNGA2Q16280 664 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 ZC2HC1CQ53FD0 456 aaPredicted RBP12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 FAM133BQ5BKY9 247 aaKnown RBP12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 TNFAIP8L3Q5GJ75 292 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 SLFN13Q68D06 897 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 TLDC1Q6P9B6 456 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 TBC1D1Q86TI0 1168 aaPredicted RBP12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 PNMA8AQ86V59 439 aaPredicted RBP12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 TBC1D31Q96DN5 1066 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 RPS6KC1Q96S38 1066 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 ROPN1BQ9BZX4 212 aaPredicted RBP12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 ROPN1Q9HAT0 212 aaPredicted RBP12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 PARVGQ9HBI0 331 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 RGL1Q9NZL6 768 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 MTUS1Q9ULD2 1270 aa12.74□□□□□ -0.37
VIPAS39-211ENST00000557658 TMEM110-MUSTN1A8MSY1 372 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 BCRP11274 1271 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 ALAS1P13196 640 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 CIITAP33076 1130 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 ZNF76P36508 570 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 COG2Q14746 738 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 CRYMQ14894 314 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 MFSD5Q6N075 450 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 TTC27Q6P3X3 843 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms