RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 UBA7P41226 1012 aa13.86□□□□□ -0.19
SLIRP-211ENST00000557623 FAM189BP81408 668 aa13.86□□□□□ -0.19
SLIRP-211ENST00000557623 BECN1Q14457 450 aa13.86□□□□□ -0.19
SLIRP-211ENST00000557623 PTPAQ15257 358 aa13.86□□□□□ -0.19
SLIRP-211ENST00000557623 CABP7Q86V35 215 aa13.86□□□□□ -0.19
SLIRP-211ENST00000557623 CRIPAKQ8N1N5 446 aa13.86□□□□□ -0.19
SLIRP-211ENST00000557623 MYLIPQ8WY64 445 aa13.86□□□□□ -0.19
SLIRP-211ENST00000557623 CALML4Q96GE6 196 aa13.86□□□□□ -0.19
SLIRP-211ENST00000557623 ZNF396Q96N95 335 aaPredicted RBP13.86□□□□□ -0.19
SLIRP-211ENST00000557623 NFKBIZQ9BYH8 718 aa13.86□□□□□ -0.19
SLIRP-211ENST00000557623 POLR3FQ9H1D9 316 aaPredicted RBP13.86□□□□□ -0.19
SLIRP-211ENST00000557623 PRDM12Q9H4Q4 367 aa13.86□□□□□ -0.19
SLIRP-211ENST00000557623 ELAC1Q9H777 363 aaKnown RBP13.86□□□□□ -0.19
SLIRP-211ENST00000557623 MORC2Q9Y6X9 1032 aaPredicted RBP13.86□□□□□ -0.19
SLIRP-211ENST00000557623 SZT2Q5T011 3432 aa13.86□□□□□ -0.19
SLIRP-211ENST00000557623 ADGRA3Q8IWK6 1321 aa13.86□□□□□ -0.19
SLIRP-211ENST00000557623 HOXA2O43364 376 aa13.85□□□□□ -0.19
SLIRP-211ENST00000557623 CSDE1O75534 798 aaKnown RBP13.85□□□□□ -0.19
SLIRP-211ENST00000557623 ERLIN2O94905 339 aa13.85□□□□□ -0.19
SLIRP-211ENST00000557623 ZSCAN22P10073 491 aaPredicted RBP13.85□□□□□ -0.19
SLIRP-211ENST00000557623 SKIP12755 728 aa13.85□□□□□ -0.19
SLIRP-211ENST00000557623 HOXB1P14653 301 aaPredicted RBP13.85□□□□□ -0.19
SLIRP-211ENST00000557623 FOSL2P15408 326 aa13.85□□□□□ -0.19
SLIRP-211ENST00000557623 FGFR4P22455 802 aa13.85□□□□□ -0.19
SLIRP-211ENST00000557623 GLRA2P23416 452 aa13.85□□□□□ -0.19
SLIRP-211ENST00000557623 PTENP60484 403 aa13.85□□□□□ -0.19
SLIRP-211ENST00000557623 ERVK-21P61565 698 aa13.85□□□□□ -0.19
SLIRP-211ENST00000557623 NCBP1Q09161 790 aaKnown RBP13.85□□□□□ -0.19
SLIRP-211ENST00000557623 ZRSR1Q15695 479 aaKnown RBP13.85□□□□□ -0.19
SLIRP-211ENST00000557623 FAM102BQ5T8I3 360 aa13.85□□□□□ -0.19
SLIRP-211ENST00000557623 FAM173BQ6P4H8 233 aa13.85□□□□□ -0.19
SLIRP-211ENST00000557623 MAEAQ7L5Y9 396 aa13.85□□□□□ -0.19
SLIRP-211ENST00000557623 FIBCD1Q8N539 461 aa13.85□□□□□ -0.19
SLIRP-211ENST00000557623 ASAP3Q8TDY4 903 aa13.85□□□□□ -0.19
SLIRP-211ENST00000557623 ZNF689Q96CS4 500 aaPredicted RBP13.85□□□□□ -0.19
SLIRP-211ENST00000557623 TMEM161AQ9NX61 479 aa13.85□□□□□ -0.19
SLIRP-211ENST00000557623 RWDD3Q9Y3V2 267 aa13.85□□□□□ -0.19
SLIRP-211ENST00000557623 A0A0U1RQF3 1178 aa13.84□□□□□ -0.19
SLIRP-211ENST00000557623 E9PMD0 336 aa13.84□□□□□ -0.19
SLIRP-211ENST00000557623 ARHGEF15O94989 841 aa13.84□□□□□ -0.19
SLIRP-211ENST00000557623 EOMESO95936 686 aa13.84□□□□□ -0.19
SLIRP-211ENST00000557623 AXLP30530 894 aa13.84□□□□□ -0.19
SLIRP-211ENST00000557623 CEBPZQ03701 1054 aaKnown RBP13.84□□□□□ -0.19
SLIRP-211ENST00000557623 CAPSQ13938 189 aa13.84□□□□□ -0.19
SLIRP-211ENST00000557623 BTG3Q14201 252 aaPredicted RBP13.84□□□□□ -0.19
SLIRP-211ENST00000557623 PPP2R5AQ15172 486 aa13.84□□□□□ -0.19
SLIRP-211ENST00000557623 TWF2Q6IBS0 349 aaKnown RBP13.84□□□□□ -0.19
SLIRP-211ENST00000557623 CMTR2Q8IYT2 770 aaKnown RBP13.84□□□□□ -0.19
SLIRP-211ENST00000557623 RASSF8Q8NHQ8 419 aa13.84□□□□□ -0.19
SLIRP-211ENST00000557623 ARNTL2Q8WYA1 636 aa13.84□□□□□ -0.19
SLIRP-211ENST00000557623 KIFAP3Q92845 792 aa13.84□□□□□ -0.19
SLIRP-211ENST00000557623 PNMA5Q96PV4 448 aa13.84□□□□□ -0.19
SLIRP-211ENST00000557623 USP28Q96RU2 1077 aa13.84□□□□□ -0.19
SLIRP-211ENST00000557623 TIPINQ9BVW5 301 aa13.84□□□□□ -0.19
SLIRP-211ENST00000557623 TRAIPQ9BWF2 469 aa13.84□□□□□ -0.19
SLIRP-211ENST00000557623 C2orf40Q9H1Z8 148 aa13.84□□□□□ -0.19
SLIRP-211ENST00000557623 RC3H2Q9HBD1 1191 aaKnown RBP13.84□□□□□ -0.19
SLIRP-211ENST00000557623 AGPAT5Q9NUQ2 364 aa13.84□□□□□ -0.19
SLIRP-211ENST00000557623 WDR70Q9NW82 654 aa13.84□□□□□ -0.19
SLIRP-211ENST00000557623 PIN4Q9Y237 131 aaKnown RBP13.84□□□□□ -0.19
SLIRP-211ENST00000557623 SRPRBQ9Y5M8 271 aaKnown RBP13.84□□□□□ -0.19
SLIRP-211ENST00000557623 LAMA2P24043 3122 aaKnown RBP13.83□□□□□ -0.2
SLIRP-211ENST00000557623 LRRIQ4A6NIV6 560 aa13.83□□□□□ -0.2
SLIRP-211ENST00000557623 INO80B-WBP1J3KQ70 363 aa13.83□□□□□ -0.2
SLIRP-211ENST00000557623 F13A1P00488 732 aa13.83□□□□□ -0.2
SLIRP-211ENST00000557623 IBSPP21815 317 aaPredicted RBP13.83□□□□□ -0.2
SLIRP-211ENST00000557623 MARCKSP29966 332 aaPredicted RBP13.83□□□□□ -0.2
SLIRP-211ENST00000557623 TXLNAP40222 546 aa13.83□□□□□ -0.2
SLIRP-211ENST00000557623 NASPP49321 788 aaPredicted RBP13.83□□□□□ -0.2
SLIRP-211ENST00000557623 RAB27AP51159 221 aa13.83□□□□□ -0.2
SLIRP-211ENST00000557623 EMP3P54852 163 aa13.83□□□□□ -0.2
SLIRP-211ENST00000557623 GRB10Q13322 594 aa13.83□□□□□ -0.2
SLIRP-211ENST00000557623 SLC39A14Q15043 492 aa13.83□□□□□ -0.2
SLIRP-211ENST00000557623 STK38Q15208 465 aa13.83□□□□□ -0.2
SLIRP-211ENST00000557623 TMEM119Q4V9L6 283 aa13.83□□□□□ -0.2
SLIRP-211ENST00000557623 ATL3Q6DD88 541 aa13.83□□□□□ -0.2
SLIRP-211ENST00000557623 ECHDC2Q86YB7 292 aa13.83□□□□□ -0.2
SLIRP-211ENST00000557623 ZBTB8OSQ8IWT0 167 aa13.83□□□□□ -0.2
SLIRP-211ENST00000557623 SYT2Q8N9I0 419 aaPredicted RBP13.83□□□□□ -0.2
SLIRP-211ENST00000557623 MARVELD3Q96A59 401 aa13.83□□□□□ -0.2
SLIRP-211ENST00000557623 IFT74Q96LB3 600 aa13.83□□□□□ -0.2
SLIRP-211ENST00000557623 CCSER1Q9C0I3 900 aa13.83□□□□□ -0.2
SLIRP-211ENST00000557623 CERS4Q9HA82 394 aa13.83□□□□□ -0.2
SLIRP-211ENST00000557623 GPRC5CQ9NQ84 441 aa13.83□□□□□ -0.2
SLIRP-211ENST00000557623 KCND2Q9NZV8 630 aa13.83□□□□□ -0.2
SLIRP-211ENST00000557623 CCDC39Q9UFE4 941 aa13.83□□□□□ -0.2
SLIRP-211ENST00000557623 FBXO2Q9UK22 296 aaPredicted RBP13.83□□□□□ -0.2
SLIRP-211ENST00000557623 NAMPTP43490 491 aa13.82□□□□□ -0.2
SLIRP-211ENST00000557623 GRIN1Q05586 938 aa13.82□□□□□ -0.2
SLIRP-211ENST00000557623 MBTD1Q05BQ5 628 aa13.82□□□□□ -0.2
SLIRP-211ENST00000557623 ARSIQ5FYB1 569 aa13.82□□□□□ -0.2
SLIRP-211ENST00000557623 FOXD4L5Q5VV16 416 aaPredicted RBP13.82□□□□□ -0.2
SLIRP-211ENST00000557623 RINT1Q6NUQ1 792 aa13.82□□□□□ -0.2
SLIRP-211ENST00000557623 KCNK18Q7Z418 384 aa13.82□□□□□ -0.2
SLIRP-211ENST00000557623 TMEM192Q8IY95 271 aa13.82□□□□□ -0.2
SLIRP-211ENST00000557623 ABI1Q8IZP0 508 aa13.82□□□□□ -0.2
SLIRP-211ENST00000557623 KRI1Q8N9T8 703 aaKnown RBP13.82□□□□□ -0.2
SLIRP-211ENST00000557623 FOXD4L4Q8WXT5 416 aaPredicted RBP13.82□□□□□ -0.2
SLIRP-211ENST00000557623 RSPH1Q8WYR4 309 aa13.82□□□□□ -0.2
SLIRP-211ENST00000557623 CCDC51Q96ER9 411 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms