RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 CMTM4Q8IZR5 234 aa6.19□□□□□ -1.42
VRK1-207ENST00000557352 APPBP2Q92624 585 aa6.19□□□□□ -1.42
VRK1-207ENST00000557352 CHFRQ96EP1 664 aa6.19□□□□□ -1.42
VRK1-207ENST00000557352 ZNF512Q96ME7 567 aaPredicted RBP6.19□□□□□ -1.42
VRK1-207ENST00000557352 GPR87Q9BY21 358 aa6.19□□□□□ -1.42
VRK1-207ENST00000557352 SLC2A4RGQ9NR83 387 aa6.19□□□□□ -1.42
VRK1-207ENST00000557352 FANCLQ9NW38 375 aa6.19□□□□□ -1.42
VRK1-207ENST00000557352 NCDNQ9UBB6 729 aa6.19□□□□□ -1.42
VRK1-207ENST00000557352 XDHP47989 1333 aa6.19□□□□□ -1.42
VRK1-207ENST00000557352 MTSS1O43312 755 aa6.18□□□□□ -1.42
VRK1-207ENST00000557352 FSBPO95073 299 aa6.18□□□□□ -1.42
VRK1-207ENST00000557352 PEX11BO96011 259 aa6.18□□□□□ -1.42
VRK1-207ENST00000557352 ADH4P08319 380 aa6.18□□□□□ -1.42
VRK1-207ENST00000557352 PCBP1Q15365 356 aaKnown RBP eCLIP6.18□□□□□ -1.42
VRK1-207ENST00000557352 MFSD5Q6N075 450 aa6.18□□□□□ -1.42
VRK1-207ENST00000557352 PASD1Q8IV76 773 aa6.18□□□□□ -1.42
VRK1-207ENST00000557352 ELOA2Q8IYF1 753 aaPredicted RBP6.18□□□□□ -1.42
VRK1-207ENST00000557352 PPP1R14CQ8TAE6 165 aa6.18□□□□□ -1.42
VRK1-207ENST00000557352 LARP4BQ92615 738 aaKnown RBP6.18□□□□□ -1.42
VRK1-207ENST00000557352 ARL8AQ96BM9 186 aa6.18□□□□□ -1.42
VRK1-207ENST00000557352 ZNF496Q96IT1 587 aaPredicted RBP6.18□□□□□ -1.42
VRK1-207ENST00000557352 HIST1H2AHQ96KK5 128 aa6.18□□□□□ -1.42
VRK1-207ENST00000557352 UIMC1Q96RL1 719 aa6.18□□□□□ -1.42
VRK1-207ENST00000557352 HIST1H2AJQ99878 128 aa6.18□□□□□ -1.42
VRK1-207ENST00000557352 REXO2Q9Y3B8 237 aaKnown RBP6.18□□□□□ -1.42
VRK1-207ENST00000557352 MYPNQ86TC9 1320 aa6.18□□□□□ -1.42
VRK1-207ENST00000557352 WDR33Q9C0J8 1336 aaKnown RBP6.18□□□□□ -1.42
VRK1-207ENST00000557352 KLRG2A4D1S0 409 aaPredicted RBP6.17□□□□□ -1.42
VRK1-207ENST00000557352 PCDH8O95206 1070 aa6.17□□□□□ -1.42
VRK1-207ENST00000557352 GAAP10253 952 aa6.17□□□□□ -1.42
VRK1-207ENST00000557352 KPNA1P52294 538 aaPredicted RBP6.17□□□□□ -1.42
VRK1-207ENST00000557352 NPEPPSP55786 919 aa6.17□□□□□ -1.42
VRK1-207ENST00000557352 TOB2Q14106 344 aaPredicted RBP6.17□□□□□ -1.42
VRK1-207ENST00000557352 SPIDRQ14159 915 aa6.17□□□□□ -1.42
VRK1-207ENST00000557352 C1QL3Q5VWW1 255 aa6.17□□□□□ -1.42
VRK1-207ENST00000557352 ZNF662Q6ZS27 426 aa6.17□□□□□ -1.42
VRK1-207ENST00000557352 DHX37Q8IY37 1157 aaKnown RBP6.17□□□□□ -1.42
VRK1-207ENST00000557352 NIM1KQ8IY84 436 aa6.17□□□□□ -1.42
VRK1-207ENST00000557352 SMC1BQ8NDV3 1235 aa6.17□□□□□ -1.42
VRK1-207ENST00000557352 CLIP3Q96DZ5 547 aa6.17□□□□□ -1.42
VRK1-207ENST00000557352 IKZF4Q9H2S9 585 aa6.17□□□□□ -1.42
VRK1-207ENST00000557352 ING3Q9NXR8 418 aa6.17□□□□□ -1.42
VRK1-207ENST00000557352 MSRAQ9UJ68 235 aa6.17□□□□□ -1.42
VRK1-207ENST00000557352 MFAP3LO75121 409 aa6.16□□□□□ -1.42
VRK1-207ENST00000557352 STC2O76061 302 aa6.16□□□□□ -1.42
VRK1-207ENST00000557352 ZBTB41Q5SVQ8 909 aa6.16□□□□□ -1.42
VRK1-207ENST00000557352 GPR158Q5T848 1215 aa6.16□□□□□ -1.42
VRK1-207ENST00000557352 ESPNLQ6ZVH7 1005 aa6.16□□□□□ -1.42
VRK1-207ENST00000557352 HTR3DQ70Z44 454 aa6.16□□□□□ -1.42
VRK1-207ENST00000557352 MB21D1Q8N884 522 aa6.16□□□□□ -1.42
VRK1-207ENST00000557352 PIK3C3Q8NEB9 887 aa6.16□□□□□ -1.42
VRK1-207ENST00000557352 MDGA1Q8NFP4 955 aa6.16□□□□□ -1.42
VRK1-207ENST00000557352 ATXN2LQ8WWM7 1075 aaKnown RBP6.16□□□□□ -1.42
VRK1-207ENST00000557352 CEP89Q96ST8 783 aa6.16□□□□□ -1.42
VRK1-207ENST00000557352 MNTQ99583 582 aa6.16□□□□□ -1.42
VRK1-207ENST00000557352 USP36Q9P275 1121 aaKnown RBP6.16□□□□□ -1.42
VRK1-207ENST00000557352 PCDHB6Q9Y5E3 794 aa6.16□□□□□ -1.42
VRK1-207ENST00000557352 LCHNA4D1U4 455 aa6.15□□□□□ -1.42
VRK1-207ENST00000557352 IPO13O94829 963 aaKnown RBP6.15□□□□□ -1.42
VRK1-207ENST00000557352 INHBCP55103 352 aa6.15□□□□□ -1.42
VRK1-207ENST00000557352 CD69Q07108 199 aa6.15□□□□□ -1.42
VRK1-207ENST00000557352 SEPT7Q16181 437 aaKnown RBP6.15□□□□□ -1.42
VRK1-207ENST00000557352 ZNF627Q7L945 461 aa6.15□□□□□ -1.42
VRK1-207ENST00000557352 LDLRAD3Q86YD5 345 aa6.15□□□□□ -1.42
VRK1-207ENST00000557352 UNC5BQ8IZJ1 945 aa6.15□□□□□ -1.42
VRK1-207ENST00000557352 CDYL2Q8N8U2 506 aa6.15□□□□□ -1.42
VRK1-207ENST00000557352 PGBD4Q96DM1 585 aa6.15□□□□□ -1.42
VRK1-207ENST00000557352 GPR101Q96P66 508 aaPredicted RBP6.15□□□□□ -1.42
VRK1-207ENST00000557352 TARS2Q9BW92 718 aaKnown RBP6.15□□□□□ -1.42
VRK1-207ENST00000557352 SPTLC3Q9NUV7 552 aa6.15□□□□□ -1.42
VRK1-207ENST00000557352 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.15□□□□□ -1.42
VRK1-207ENST00000557352 GPRC5BQ9NZH0 403 aa6.15□□□□□ -1.42
VRK1-207ENST00000557352 GOLGA6L6A8MZA4 724 aa6.14□□□□□ -1.43
VRK1-207ENST00000557352 FAM20BO75063 409 aa6.14□□□□□ -1.43
VRK1-207ENST00000557352 CDC45O75419 566 aa6.14□□□□□ -1.43
VRK1-207ENST00000557352 ALDH1A2O94788 518 aa6.14□□□□□ -1.43
VRK1-207ENST00000557352 PFKMP08237 780 aa6.14□□□□□ -1.43
VRK1-207ENST00000557352 SCNN1BP51168 640 aa6.14□□□□□ -1.43
VRK1-207ENST00000557352 PHC1P78364 1004 aa6.14□□□□□ -1.43
VRK1-207ENST00000557352 DALRD3Q5D0E6 543 aaKnown RBP6.14□□□□□ -1.43
VRK1-207ENST00000557352 PPM1KQ8N3J5 372 aa6.14□□□□□ -1.43
VRK1-207ENST00000557352 ZNF610Q8N9Z0 462 aa6.14□□□□□ -1.43
VRK1-207ENST00000557352 ST8SIA2Q92186 375 aa6.14□□□□□ -1.43
VRK1-207ENST00000557352 FERMT2Q96AC1 680 aa6.14□□□□□ -1.43
VRK1-207ENST00000557352 KRTAP9-8Q9BYQ0 159 aa6.14□□□□□ -1.43
VRK1-207ENST00000557352 ENKD1Q9H0I2 346 aa6.14□□□□□ -1.43
VRK1-207ENST00000557352 MS4A5Q9H3V2 200 aa6.14□□□□□ -1.43
VRK1-207ENST00000557352 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.14□□□□□ -1.43
VRK1-207ENST00000557352 C11orf21Q9P2W6 132 aa6.14□□□□□ -1.43
VRK1-207ENST00000557352 USP18Q9UMW8 372 aa6.14□□□□□ -1.43
VRK1-207ENST00000557352 MRPL42Q9Y6G3 142 aaKnown RBP6.14□□□□□ -1.43
VRK1-207ENST00000557352 A0A087X1B8 175 aa6.13□□□□□ -1.43
VRK1-207ENST00000557352 ST20-MTHFSA0A0A6YYL1 179 aa6.13□□□□□ -1.43
VRK1-207ENST00000557352 RPS6KA4O75676 772 aa6.13□□□□□ -1.43
VRK1-207ENST00000557352 SEC24DO94855 1032 aaPredicted RBP6.13□□□□□ -1.43
VRK1-207ENST00000557352 LY86O95711 162 aa6.13□□□□□ -1.43
VRK1-207ENST00000557352 GNAT2P19087 354 aa6.13□□□□□ -1.43
VRK1-207ENST00000557352 LSP1P33241 339 aa6.13□□□□□ -1.43
VRK1-207ENST00000557352 PURAQ00577 322 aaKnown RBP6.13□□□□□ -1.43
VRK1-207ENST00000557352 SART3Q15020 963 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms