RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 UNC45AQ9H3U1 944 aa13.85□□□□□ -0.19
SNX6-209ENST00000557265 SFXN1Q9H9B4 322 aa13.85□□□□□ -0.19
SNX6-209ENST00000557265 KCNK12Q9HB15 430 aa13.85□□□□□ -0.19
SNX6-209ENST00000557265 DNAJB4Q9UDY4 337 aa13.85□□□□□ -0.19
SNX6-209ENST00000557265 FBXL21Q9UKT6 434 aa13.85□□□□□ -0.19
SNX6-209ENST00000557265 PIN4Q9Y237 131 aaKnown RBP13.85□□□□□ -0.19
SNX6-209ENST00000557265 EVPLQ92817 2033 aa13.85□□□□□ -0.19
SNX6-209ENST00000557265 IGKV6-21A0A0C4DH24 114 aa13.84□□□□□ -0.19
SNX6-209ENST00000557265 TMEM150BA6NC51 233 aa13.84□□□□□ -0.19
SNX6-209ENST00000557265 PRPF3O43395 683 aaKnown RBP13.84□□□□□ -0.19
SNX6-209ENST00000557265 SSBP05455 408 aaKnown RBP eCLIP13.84□□□□□ -0.19
SNX6-209ENST00000557265 ID4P47928 161 aa13.84□□□□□ -0.19
SNX6-209ENST00000557265 IRX6P78412 446 aaPredicted RBP13.84□□□□□ -0.19
SNX6-209ENST00000557265 TSGA10IPQ3SY00 556 aa13.84□□□□□ -0.19
SNX6-209ENST00000557265 XKR3Q5GH77 459 aa13.84□□□□□ -0.19
SNX6-209ENST00000557265 LRCH2Q5VUJ6 765 aa13.84□□□□□ -0.19
SNX6-209ENST00000557265 ZNF280BQ86YH2 543 aa13.84□□□□□ -0.19
SNX6-209ENST00000557265 CCDC105Q8IYK2 499 aa13.84□□□□□ -0.19
SNX6-209ENST00000557265 SIX5Q8N196 739 aa13.84□□□□□ -0.19
SNX6-209ENST00000557265 BICD2Q8TD16 824 aa13.84□□□□□ -0.19
SNX6-209ENST00000557265 SLC5A5Q92911 643 aa13.84□□□□□ -0.19
SNX6-209ENST00000557265 PHKBQ93100 1093 aa13.84□□□□□ -0.19
SNX6-209ENST00000557265 CEP89Q96ST8 783 aa13.84□□□□□ -0.19
SNX6-209ENST00000557265 TEKT3Q9BXF9 490 aa13.84□□□□□ -0.19
SNX6-209ENST00000557265 EMILIN2Q9BXX0 1053 aa13.84□□□□□ -0.19
SNX6-209ENST00000557265 NIFKQ9BYG3 293 aaKnown RBP13.84□□□□□ -0.19
SNX6-209ENST00000557265 INO80BQ9C086 356 aaPredicted RBP13.84□□□□□ -0.19
SNX6-209ENST00000557265 FAM105AQ9NUU6 356 aa13.84□□□□□ -0.19
SNX6-209ENST00000557265 SUCLA2Q9P2R7 463 aaPredicted RBP13.84□□□□□ -0.19
SNX6-209ENST00000557265 SEPT9Q9UHD8 586 aaPredicted RBP13.84□□□□□ -0.19
SNX6-209ENST00000557265 PLXNA3P51805 1871 aa13.84□□□□□ -0.19
SNX6-209ENST00000557265 MYO10Q9HD67 2058 aa13.83□□□□□ -0.2
SNX6-209ENST00000557265 B4GALT3O60512 393 aa13.83□□□□□ -0.2
SNX6-209ENST00000557265 ZNF623O75123 536 aa13.83□□□□□ -0.2
SNX6-209ENST00000557265 STBD1O95210 358 aa13.83□□□□□ -0.2
SNX6-209ENST00000557265 CNPP09543 421 aaKnown RBP13.83□□□□□ -0.2
SNX6-209ENST00000557265 CPA1P15085 419 aa13.83□□□□□ -0.2
SNX6-209ENST00000557265 USP11P51784 963 aa13.83□□□□□ -0.2
SNX6-209ENST00000557265 CLCN4P51793 760 aa13.83□□□□□ -0.2
SNX6-209ENST00000557265 AKAP17AQ02040 695 aaKnown RBP13.83□□□□□ -0.2
SNX6-209ENST00000557265 KRT32Q14532 448 aa13.83□□□□□ -0.2
SNX6-209ENST00000557265 ANGPT1Q15389 498 aa13.83□□□□□ -0.2
SNX6-209ENST00000557265 LETM2Q2VYF4 491 aa13.83□□□□□ -0.2
SNX6-209ENST00000557265 CATSPER4Q7RTX7 472 aa13.83□□□□□ -0.2
SNX6-209ENST00000557265 ERMP1Q7Z2K6 904 aa13.83□□□□□ -0.2
SNX6-209ENST00000557265 MIER3Q7Z3K6 550 aa13.83□□□□□ -0.2
SNX6-209ENST00000557265 ZNF410Q86VK4 478 aa13.83□□□□□ -0.2
SNX6-209ENST00000557265 RHPN2Q8IUC4 686 aa13.83□□□□□ -0.2
SNX6-209ENST00000557265 KSR1Q8IVT5 923 aa13.83□□□□□ -0.2
SNX6-209ENST00000557265 DTWD2Q8NBA8 298 aa13.83□□□□□ -0.2
SNX6-209ENST00000557265 PGBD4Q96DM1 585 aa13.83□□□□□ -0.2
SNX6-209ENST00000557265 RTP3Q9BQQ7 232 aa13.83□□□□□ -0.2
SNX6-209ENST00000557265 DUSP12Q9UNI6 340 aa13.83□□□□□ -0.2
SNX6-209ENST00000557265 DDX11L8A8MPP1 907 aa13.82□□□□□ -0.2
SNX6-209ENST00000557265 LILRB3O75022 631 aa13.82□□□□□ -0.2
SNX6-209ENST00000557265 PSMD10O75832 226 aa13.82□□□□□ -0.2
SNX6-209ENST00000557265 DDHD2O94830 711 aa13.82□□□□□ -0.2
SNX6-209ENST00000557265 HMGB1P09429 215 aaKnown RBP13.82□□□□□ -0.2
SNX6-209ENST00000557265 RAB27AP51159 221 aa13.82□□□□□ -0.2
SNX6-209ENST00000557265 AFF1P51825 1210 aaKnown RBP13.82□□□□□ -0.2
SNX6-209ENST00000557265 RDM1Q8NG50 284 aa13.82□□□□□ -0.2
SNX6-209ENST00000557265 URGCPQ8TCY9 931 aa13.82□□□□□ -0.2
SNX6-209ENST00000557265 NLRP4Q96MN2 994 aa13.82□□□□□ -0.2
SNX6-209ENST00000557265 MRPL17Q9NRX2 175 aaKnown RBP13.82□□□□□ -0.2
SNX6-209ENST00000557265 VPS54Q9P1Q0 977 aa13.82□□□□□ -0.2
SNX6-209ENST00000557265 IGSF9Q9P2J2 1179 aa13.82□□□□□ -0.2
SNX6-209ENST00000557265 PCDHB2Q9Y5E7 798 aa13.82□□□□□ -0.2
SNX6-209ENST00000557265 EP300Q09472 2414 aaPredicted RBP13.82□□□□□ -0.2
SNX6-209ENST00000557265 STK25O00506 426 aa13.81□□□□□ -0.2
SNX6-209ENST00000557265 NARSO43776 548 aaKnown RBP13.81□□□□□ -0.2
SNX6-209ENST00000557265 N4BP1O75113 896 aaKnown RBP13.81□□□□□ -0.2
SNX6-209ENST00000557265 MAFO75444 373 aaPredicted RBP13.81□□□□□ -0.2
SNX6-209ENST00000557265 ALDH2P05091 517 aa13.81□□□□□ -0.2
SNX6-209ENST00000557265 AGMOQ6ZNB7 445 aa13.81□□□□□ -0.2
SNX6-209ENST00000557265 C15orf39Q6ZRI6 1047 aa13.81□□□□□ -0.2
SNX6-209ENST00000557265 Q6ZUG5 572 aa13.81□□□□□ -0.2
SNX6-209ENST00000557265 CCDC148Q8NFR7 591 aa13.81□□□□□ -0.2
SNX6-209ENST00000557265 KCNG4Q8TDN1 519 aa13.81□□□□□ -0.2
SNX6-209ENST00000557265 TBCKQ8TEA7 893 aa13.81□□□□□ -0.2
SNX6-209ENST00000557265 RSAD2Q8WXG1 361 aa13.81□□□□□ -0.2
SNX6-209ENST00000557265 BRF1Q92994 677 aa13.81□□□□□ -0.2
SNX6-209ENST00000557265 STK39Q9UEW8 545 aa13.81□□□□□ -0.2
SNX6-209ENST00000557265 FAN1Q9Y2M0 1017 aa13.81□□□□□ -0.2
SNX6-209ENST00000557265 C2CD2LO14523 706 aa13.8□□□□□ -0.2
SNX6-209ENST00000557265 NRP1O14786 923 aa13.8□□□□□ -0.2
SNX6-209ENST00000557265 CFHP08603 1231 aa13.8□□□□□ -0.2
SNX6-209ENST00000557265 Q4G0T1 1027 aa13.8□□□□□ -0.2
SNX6-209ENST00000557265 B3GNT9Q6UX72 402 aa13.8□□□□□ -0.2
SNX6-209ENST00000557265 MRPL10Q7Z7H8 261 aaKnown RBP13.8□□□□□ -0.2
SNX6-209ENST00000557265 FAM193BQ96PV7 902 aaPredicted RBP13.8□□□□□ -0.2
SNX6-209ENST00000557265 TMEM175Q9BSA9 504 aa13.8□□□□□ -0.2
SNX6-209ENST00000557265 SLC26A6Q9BXS9 759 aa13.8□□□□□ -0.2
SNX6-209ENST00000557265 RSAD1Q9HA92 442 aa13.8□□□□□ -0.2
SNX6-209ENST00000557265 IFT122Q9HBG6 1241 aa13.8□□□□□ -0.2
SNX6-209ENST00000557265 MAN1C1Q9NR34 630 aa13.8□□□□□ -0.2
SNX6-209ENST00000557265 AGPAT5Q9NUQ2 364 aa13.8□□□□□ -0.2
SNX6-209ENST00000557265 KANSL3Q9P2N6 904 aa13.8□□□□□ -0.2
SNX6-209ENST00000557265 WNT16Q9UBV4 365 aa13.8□□□□□ -0.2
SNX6-209ENST00000557265 CCDC195A0A1B0GUA6 201 aa13.79□□□□□ -0.2
SNX6-209ENST00000557265 KRBA1A5PL33 1030 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms