RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 ATG2AQ2TAZ0 1938 aa9.85□□□□□ -0.83
VRK1-206ENST00000557222 RBAK-RBAKDNI3L0D1 243 aa9.84□□□□□ -0.83
VRK1-206ENST00000557222 LINC01565O15544 149 aa9.84□□□□□ -0.83
VRK1-206ENST00000557222 RPS6KA5O75582 802 aa9.84□□□□□ -0.83
VRK1-206ENST00000557222 CYP3A4P08684 503 aa9.84□□□□□ -0.83
VRK1-206ENST00000557222 RXRAP19793 462 aa9.84□□□□□ -0.83
VRK1-206ENST00000557222 GTF2F1P35269 517 aaKnown RBP eCLIP9.84□□□□□ -0.83
VRK1-206ENST00000557222 PTGIRP43119 386 aa9.84□□□□□ -0.83
VRK1-206ENST00000557222 ADCY7P51828 1080 aa9.84□□□□□ -0.83
VRK1-206ENST00000557222 EXOSC10Q01780 885 aaKnown RBP9.84□□□□□ -0.83
VRK1-206ENST00000557222 PTSQ03393 145 aa9.84□□□□□ -0.83
VRK1-206ENST00000557222 ITGB3BPQ13352 177 aaPredicted RBP9.84□□□□□ -0.83
VRK1-206ENST00000557222 CLUL1Q15846 466 aa9.84□□□□□ -0.83
VRK1-206ENST00000557222 WWC2Q6AWC2 1192 aa9.84□□□□□ -0.83
VRK1-206ENST00000557222 APOA5Q6Q788 366 aa9.84□□□□□ -0.83
VRK1-206ENST00000557222 TMEM184AQ6ZMB5 413 aa9.84□□□□□ -0.83
VRK1-206ENST00000557222 HFE2Q6ZVN8 426 aa9.84□□□□□ -0.83
VRK1-206ENST00000557222 KIAA0319LQ8IZA0 1049 aa9.84□□□□□ -0.83
VRK1-206ENST00000557222 CCDC82Q8N4S0 544 aa9.84□□□□□ -0.83
VRK1-206ENST00000557222 CYP2W1Q8TAV3 490 aa9.84□□□□□ -0.83
VRK1-206ENST00000557222 POLMQ9NP87 494 aaPredicted RBP9.84□□□□□ -0.83
VRK1-206ENST00000557222 TBC1D22BQ9NU19 505 aa9.84□□□□□ -0.83
VRK1-206ENST00000557222 CNTNAP5Q8WYK1 1306 aa9.83□□□□□ -0.84
VRK1-206ENST00000557222 hCG_1642624A0A1W2PR95 340 aa9.83□□□□□ -0.84
VRK1-206ENST00000557222 DENND3A2RUS2 1198 aa9.83□□□□□ -0.84
VRK1-206ENST00000557222 SMCO2A6NFE2 343 aa9.83□□□□□ -0.84
VRK1-206ENST00000557222 C9IYK1 514 aa9.83□□□□□ -0.84
VRK1-206ENST00000557222 DHX15O43143 795 aaKnown RBP9.83□□□□□ -0.84
VRK1-206ENST00000557222 SRGAP2BP0DMP2 458 aa9.83□□□□□ -0.84
VRK1-206ENST00000557222 VSIG8P0DPA2 414 aa9.83□□□□□ -0.84
VRK1-206ENST00000557222 ZNF76P36508 570 aa9.83□□□□□ -0.84
VRK1-206ENST00000557222 NRIP1P48552 1158 aa9.83□□□□□ -0.84
VRK1-206ENST00000557222 MRE11P49959 708 aa9.83□□□□□ -0.84
VRK1-206ENST00000557222 CRYBB1P53674 252 aaPredicted RBP9.83□□□□□ -0.84
VRK1-206ENST00000557222 TMEM62Q0P6H9 643 aa9.83□□□□□ -0.84
VRK1-206ENST00000557222 RTN1Q16799 776 aa9.83□□□□□ -0.84
VRK1-206ENST00000557222 PAN2Q504Q3 1202 aaKnown RBP9.83□□□□□ -0.84
VRK1-206ENST00000557222 ZNF746Q6NUN9 644 aaPredicted RBP9.83□□□□□ -0.84
VRK1-206ENST00000557222 MIS18BP1Q6P0N0 1132 aa9.83□□□□□ -0.84
VRK1-206ENST00000557222 DHX32Q7L7V1 743 aaKnown RBP9.83□□□□□ -0.84
VRK1-206ENST00000557222 ADGRD2Q7Z7M1 963 aa9.83□□□□□ -0.84
VRK1-206ENST00000557222 MICU3Q86XE3 530 aa9.83□□□□□ -0.84
VRK1-206ENST00000557222 RASGRP4Q8TDF6 673 aa9.83□□□□□ -0.84
VRK1-206ENST00000557222 TRAPPC12Q8WVT3 735 aa9.83□□□□□ -0.84
VRK1-206ENST00000557222 CRYGNQ8WXF5 182 aa9.83□□□□□ -0.84
VRK1-206ENST00000557222 NEK1Q96PY6 1258 aa9.83□□□□□ -0.84
VRK1-206ENST00000557222 PHF7Q9BWX1 381 aaPredicted RBP9.83□□□□□ -0.84
VRK1-206ENST00000557222 TLE6Q9H808 572 aa9.83□□□□□ -0.84
VRK1-206ENST00000557222 ZNF302Q9NR11 478 aa9.83□□□□□ -0.84
VRK1-206ENST00000557222 TLR9Q9NR96 1032 aa9.83□□□□□ -0.84
VRK1-206ENST00000557222 TMEM161AQ9NX61 479 aa9.83□□□□□ -0.84
VRK1-206ENST00000557222 MUTYHQ9UIF7 546 aa9.83□□□□□ -0.84
VRK1-206ENST00000557222 ST3GAL5Q9UNP4 418 aa9.83□□□□□ -0.84
VRK1-206ENST00000557222 CEP131Q9UPN4 1083 aa9.83□□□□□ -0.84
VRK1-206ENST00000557222 NOC2LQ9Y3T9 749 aaKnown RBP9.83□□□□□ -0.84
VRK1-206ENST00000557222 MAFBQ9Y5Q3 323 aaPredicted RBP9.83□□□□□ -0.84
VRK1-206ENST00000557222 LOXHD1Q8IVV2 1947 aa9.82□□□□□ -0.84
VRK1-206ENST00000557222 CCDC196A0A1B0GTZ2 297 aa9.82□□□□□ -0.84
VRK1-206ENST00000557222 ESYT2A0FGR8 921 aa9.82□□□□□ -0.84
VRK1-206ENST00000557222 CARNS1A5YM72 827 aa9.82□□□□□ -0.84
VRK1-206ENST00000557222 ZBTB42B2RXF5 422 aa9.82□□□□□ -0.84
VRK1-206ENST00000557222 BACH1O14867 736 aa9.82□□□□□ -0.84
VRK1-206ENST00000557222 FSCN2O14926 492 aa9.82□□□□□ -0.84
VRK1-206ENST00000557222 MAGEB2O15479 319 aa9.82□□□□□ -0.84
VRK1-206ENST00000557222 ZBTB43O43298 467 aa9.82□□□□□ -0.84
VRK1-206ENST00000557222 MGEA5O60502 916 aa9.82□□□□□ -0.84
VRK1-206ENST00000557222 FGF18O76093 207 aa9.82□□□□□ -0.84
VRK1-206ENST00000557222 CCNE2O96020 404 aa9.82□□□□□ -0.84
VRK1-206ENST00000557222 HMGB1P09429 215 aaKnown RBP9.82□□□□□ -0.84
VRK1-206ENST00000557222 LAG3P18627 525 aa9.82□□□□□ -0.84
VRK1-206ENST00000557222 ZXDAP98168 799 aa9.82□□□□□ -0.84
VRK1-206ENST00000557222 SETQ01105 290 aaPredicted RBP9.82□□□□□ -0.84
VRK1-206ENST00000557222 PLCB3Q01970 1234 aa9.82□□□□□ -0.84
VRK1-206ENST00000557222 KRT32Q14532 448 aa9.82□□□□□ -0.84
VRK1-206ENST00000557222 DUSP6Q16828 381 aa9.82□□□□□ -0.84
VRK1-206ENST00000557222 PLA2G4DQ86XP0 818 aa9.82□□□□□ -0.84
VRK1-206ENST00000557222 CCDC60Q8IWA6 550 aaPredicted RBP9.82□□□□□ -0.84
VRK1-206ENST00000557222 SMAP1Q8IYB5 467 aaPredicted RBP9.82□□□□□ -0.84
VRK1-206ENST00000557222 MICAL1Q8TDZ2 1067 aa9.82□□□□□ -0.84
VRK1-206ENST00000557222 CCDC12Q8WUD4 166 aaPredicted RBP9.82□□□□□ -0.84
VRK1-206ENST00000557222 RSPH1Q8WYR4 309 aa9.82□□□□□ -0.84
VRK1-206ENST00000557222 SUSD6Q92537 303 aa9.82□□□□□ -0.84
VRK1-206ENST00000557222 ZBTB10Q96DT7 871 aa9.82□□□□□ -0.84
VRK1-206ENST00000557222 ADAM2Q99965 735 aa9.82□□□□□ -0.84
VRK1-206ENST00000557222 LRRC2Q9BYS8 371 aa9.82□□□□□ -0.84
VRK1-206ENST00000557222 ATP6V0A4Q9HBG4 840 aa9.82□□□□□ -0.84
VRK1-206ENST00000557222 PRM3Q9NNZ6 103 aa9.82□□□□□ -0.84
VRK1-206ENST00000557222 NGRNQ9NPE2 291 aaKnown RBP9.82□□□□□ -0.84
VRK1-206ENST00000557222 ANO2Q9NQ90 1003 aa9.82□□□□□ -0.84
VRK1-206ENST00000557222 PUF60Q9UHX1 559 aaKnown RBP9.82□□□□□ -0.84
VRK1-206ENST00000557222 USP15Q9Y4E8 981 aaPredicted RBP9.82□□□□□ -0.84
VRK1-206ENST00000557222 IGLV3-22A0A075B6J6 115 aa9.81□□□□□ -0.84
VRK1-206ENST00000557222 TMEM221A6NGB7 291 aa9.81□□□□□ -0.84
VRK1-206ENST00000557222 TBKBP1A7MCY6 615 aa9.81□□□□□ -0.84
VRK1-206ENST00000557222 FAM86B1E9PN63 330 aa9.81□□□□□ -0.84
VRK1-206ENST00000557222 M0R296 226 aa9.81□□□□□ -0.84
VRK1-206ENST00000557222 IPO5O00410 1097 aaKnown RBP9.81□□□□□ -0.84
VRK1-206ENST00000557222 GPR32O75388 356 aa9.81□□□□□ -0.84
VRK1-206ENST00000557222 C22orf31O95567 290 aa9.81□□□□□ -0.84
VRK1-206ENST00000557222 GLP2RO95838 553 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms