RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 FAM84AQ96KN4 292 aa11.02□□□□□ -0.65
TMEM260-211ENST00000556648 CEP170P1Q96L14 293 aa11.02□□□□□ -0.65
TMEM260-211ENST00000556648 STK33Q9BYT3 514 aa11.02□□□□□ -0.65
TMEM260-211ENST00000556648 R3HDMLQ9H3Y0 253 aa11.02□□□□□ -0.65
TMEM260-211ENST00000556648 JPH1Q9HDC5 661 aaPredicted RBP11.02□□□□□ -0.65
TMEM260-211ENST00000556648 L1RE1Q9UN81 338 aa11.02□□□□□ -0.65
TMEM260-211ENST00000556648 PPP2R3BQ9Y5P8 575 aa11.02□□□□□ -0.65
TMEM260-211ENST00000556648 IGSF9BQ9UPX0 1349 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 TMCO5BA8MYB1 307 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 POLR3GO15318 223 aaPredicted RBP11.01□□□□□ -0.65
TMEM260-211ENST00000556648 KRT13P13646 458 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 FERP16591 822 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 TCP1P17987 556 aaKnown RBP11.01□□□□□ -0.65
TMEM260-211ENST00000556648 LMNB1P20700 586 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 OAS2P29728 719 aaKnown RBP11.01□□□□□ -0.65
TMEM260-211ENST00000556648 ACTR2P61160 394 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 TUBB4BP68371 445 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 PRKCEQ02156 737 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 ALCAMQ13740 583 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 EPC2Q52LR7 807 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 MEI1Q5TIA1 1274 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 PALB2Q86YC2 1186 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 CBWD2Q8IUF1 395 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 XXYLT1Q8NBI6 393 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 SPATA4Q8NEY3 305 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 SLC30A5Q8TAD4 765 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 ELMO3Q96BJ8 720 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 SYT11Q9BT88 431 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 LRRC1Q9BTT6 524 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 ST6GALNAC4Q9H4F1 302 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 LUC7LQ9NQ29 371 aaKnown RBP11.01□□□□□ -0.65
TMEM260-211ENST00000556648 XPNPEP1Q9NQW7 623 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 BTBD7Q9P203 1132 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 APEX2Q9UBZ4 518 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 SEPT9Q9UHD8 586 aaPredicted RBP11.01□□□□□ -0.65
TMEM260-211ENST00000556648 TBX20Q9UMR3 447 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 BZW2Q9Y6E2 419 aaKnown RBP11.01□□□□□ -0.65
TMEM260-211ENST00000556648 DENND3A2RUS2 1198 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 LRRIQ3A6PVS8 624 aaPredicted RBP11.01□□□□□ -0.65
TMEM260-211ENST00000556648 SPATA31C2B4DYI2 1134 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 ERLIN1O75477 346 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 SLC7A5Q01650 507 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 MYBPC2Q14324 1141 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 SMC1AQ14683 1233 aaKnown RBP11.01□□□□□ -0.65
TMEM260-211ENST00000556648 SH3D19Q5HYK7 790 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 GLYCTKQ8IVS8 523 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 MMGT1Q8N4V1 131 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 RDM1Q8NG50 284 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 SLC20A1Q8WUM9 679 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 RPGRIP1Q96KN7 1286 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 GDAP1L1Q96MZ0 367 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 TIPINQ9BVW5 301 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 ZCCHC17Q9NP64 241 aaKnown RBP11.01□□□□□ -0.65
TMEM260-211ENST00000556648 TOPORSQ9NS56 1045 aaPredicted RBP11.01□□□□□ -0.65
TMEM260-211ENST00000556648 RBM12Q9NTZ6 932 aaKnown RBP11.01□□□□□ -0.65
TMEM260-211ENST00000556648 TAS2R14Q9NYV8 317 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 SLC9A2Q9UBY0 812 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 USP20Q9Y2K6 914 aa11.01□□□□□ -0.65
TMEM260-211ENST00000556648 UTRNP46939 3433 aa11□□□□□ -0.65
TMEM260-211ENST00000556648 BTNL10A8MVZ5 291 aa11□□□□□ -0.65
TMEM260-211ENST00000556648 FOXN3O00409 490 aaPredicted RBP11□□□□□ -0.65
TMEM260-211ENST00000556648 PSAPP07602 524 aa11□□□□□ -0.65
TMEM260-211ENST00000556648 NOP2P46087 812 aaKnown RBP11□□□□□ -0.65
TMEM260-211ENST00000556648 RNASE9P60153 205 aaKnown RBP11□□□□□ -0.65
TMEM260-211ENST00000556648 GABPB1Q06547 395 aaPredicted RBP11□□□□□ -0.65
TMEM260-211ENST00000556648 DMP1Q13316 513 aaPredicted RBP11□□□□□ -0.65
TMEM260-211ENST00000556648 SUPT20HL1Q3ZLR7 823 aa11□□□□□ -0.65
TMEM260-211ENST00000556648 CCDC181Q5TID7 509 aa11□□□□□ -0.65
TMEM260-211ENST00000556648 ABHD15Q6UXT9 468 aa11□□□□□ -0.65
TMEM260-211ENST00000556648 MOB2Q70IA6 237 aa11□□□□□ -0.65
TMEM260-211ENST00000556648 INTS8Q75QN2 995 aaKnown RBP11□□□□□ -0.65
TMEM260-211ENST00000556648 LRRC57Q8N9N7 239 aa11□□□□□ -0.65
TMEM260-211ENST00000556648 SEMA4DQ92854 862 aa11□□□□□ -0.65
TMEM260-211ENST00000556648 TMEM117Q9H0C3 514 aa11□□□□□ -0.65
TMEM260-211ENST00000556648 KMT5AQ9NQR1 393 aa11□□□□□ -0.65
TMEM260-211ENST00000556648 DMGDHQ9UI17 866 aaKnown RBP11□□□□□ -0.65
TMEM260-211ENST00000556648 LRRC37A2A6NM11 1700 aa11□□□□□ -0.65
TMEM260-211ENST00000556648 NFASCO94856 1347 aa11□□□□□ -0.65
TMEM260-211ENST00000556648 TARSL2A2RTX5 802 aaKnown RBP10.99□□□□□ -0.65
TMEM260-211ENST00000556648 N4BP1O75113 896 aaKnown RBP10.99□□□□□ -0.65
TMEM260-211ENST00000556648 SUPT20HL2P0C7V6 817 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 ATP4AP20648 1035 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 GALCP54803 685 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 DMTNQ08495 405 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 CASP8Q14790 479 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 MTERF2Q49AM1 385 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 C10orf76Q5T2E6 689 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 GADL1Q6ZQY3 521 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 CYFIP1Q7L576 1253 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 TAS1R3Q7RTX0 852 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 HDXQ7Z353 690 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 MAP4K3Q8IVH8 894 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 TPCN2Q8NHX9 752 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 ATP6V0A1Q93050 837 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 CLMNQ96JQ2 1002 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 POP1Q99575 1024 aaKnown RBP10.99□□□□□ -0.65
TMEM260-211ENST00000556648 POLR3FQ9H1D9 316 aaPredicted RBP10.99□□□□□ -0.65
TMEM260-211ENST00000556648 PLEKHA4Q9H4M7 779 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 ELP3Q9H9T3 547 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 PDE11AQ9HCR9 933 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms