RNA–Protein interactions for RNA: ENST00000556633.5

GPHN-214, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 512 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-214ENST00000556633 CLIP3Q96DZ5 547 aa4.9□□□□□ -1.63
GPHN-214ENST00000556633 YTHDC1Q96MU7 727 aaKnown RBP4.9□□□□□ -1.63
GPHN-214ENST00000556633 SPATA25Q9BR10 227 aa4.9□□□□□ -1.63
GPHN-214ENST00000556633 OSBPL6Q9BZF3 934 aa4.9□□□□□ -1.63
GPHN-214ENST00000556633 TMEM168Q9H0V1 697 aa4.9□□□□□ -1.63
GPHN-214ENST00000556633 DMRT3Q9NQL9 472 aa4.9□□□□□ -1.63
GPHN-214ENST00000556633 GOLGA6AQ9NYA3 693 aa4.9□□□□□ -1.63
GPHN-214ENST00000556633 SERPINB13Q9UIV8 391 aa4.9□□□□□ -1.63
GPHN-214ENST00000556633 DNM3Q9UQ16 869 aa4.9□□□□□ -1.63
GPHN-214ENST00000556633 SH3D21A4FU49 640 aa4.89□□□□□ -1.63
GPHN-214ENST00000556633 FFAR3O14843 346 aa4.89□□□□□ -1.63
GPHN-214ENST00000556633 FSBPO95073 299 aa4.89□□□□□ -1.63
GPHN-214ENST00000556633 LY86O95711 162 aa4.89□□□□□ -1.63
GPHN-214ENST00000556633 HNRNPLP14866 589 aaKnown RBP eCLIP4.89□□□□□ -1.639e-7■■□□□ 13.7
GPHN-214ENST00000556633 AKAP5P24588 427 aa4.89□□□□□ -1.63
GPHN-214ENST00000556633 AFF3P51826 1226 aaKnown RBP4.89□□□□□ -1.63
GPHN-214ENST00000556633 CAP1Q01518 475 aa4.89□□□□□ -1.63
GPHN-214ENST00000556633 CD69Q07108 199 aa4.89□□□□□ -1.63
GPHN-214ENST00000556633 GTF2H3Q13889 308 aa4.89□□□□□ -1.63
GPHN-214ENST00000556633 KCNA10Q16322 511 aa4.89□□□□□ -1.63
GPHN-214ENST00000556633 MAN2A1Q16706 1144 aa4.89□□□□□ -1.63
GPHN-214ENST00000556633 GFOD2Q3B7J2 385 aa4.89□□□□□ -1.63
GPHN-214ENST00000556633 XP32Q5T750 250 aa4.89□□□□□ -1.63
GPHN-214ENST00000556633 IFIT1BQ5T764 474 aaKnown RBP4.89□□□□□ -1.63
GPHN-214ENST00000556633 TRIM68Q6AZZ1 485 aa4.89□□□□□ -1.63
GPHN-214ENST00000556633 MCTP2Q6DN12 878 aa4.89□□□□□ -1.63
GPHN-214ENST00000556633 KLHDC10Q6PID8 442 aa4.89□□□□□ -1.63
GPHN-214ENST00000556633 Q6ZUG5 572 aa4.89□□□□□ -1.63
GPHN-214ENST00000556633 LARP4Q71RC2 724 aaKnown RBP eCLIP4.89□□□□□ -1.63
GPHN-214ENST00000556633 EPM2AIP1Q7L775 607 aaPredicted RBP4.89□□□□□ -1.63
GPHN-214ENST00000556633 CARFQ8N187 725 aa4.89□□□□□ -1.63
GPHN-214ENST00000556633 BHLHE22Q8NFJ8 381 aaPredicted RBP4.89□□□□□ -1.63
GPHN-214ENST00000556633 PPP1R14CQ8TAE6 165 aa4.89□□□□□ -1.63
GPHN-214ENST00000556633 NRG4Q8WWG1 115 aa4.89□□□□□ -1.63
GPHN-214ENST00000556633 RELTQ969Z4 430 aa4.89□□□□□ -1.63
GPHN-214ENST00000556633 DACT3Q96B18 629 aaPredicted RBP4.89□□□□□ -1.63
GPHN-214ENST00000556633 COA7Q96BR5 231 aa4.89□□□□□ -1.63
GPHN-214ENST00000556633 AIFM3Q96NN9 605 aa4.89□□□□□ -1.63
GPHN-214ENST00000556633 ADI1Q9BV57 179 aa4.89□□□□□ -1.63
GPHN-214ENST00000556633 GREM2Q9H772 168 aa4.89□□□□□ -1.63
GPHN-214ENST00000556633 GEMIN8Q9NWZ8 242 aaKnown RBP4.89□□□□□ -1.63
GPHN-214ENST00000556633 SAP30BPQ9UHR5 308 aaKnown RBP4.89□□□□□ -1.63
GPHN-214ENST00000556633 VWA7Q9Y334 891 aa4.89□□□□□ -1.63
GPHN-214ENST00000556633 NPIPB6E9PJ23 425 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 KIF3BO15066 747 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 PAX4O43316 350 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 PRC1O43663 620 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 PRAMEF4O60810 478 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 OFD1O75665 1012 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 GAAP10253 952 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 HSPA6P17066 643 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 LPOP22079 712 aaPredicted RBP4.88□□□□□ -1.63
GPHN-214ENST00000556633 MCAMP43121 646 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 RAP1GAPP47736 663 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 MEOX1P50221 254 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 RRADP55042 308 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 TBX4P57082 545 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 SESN2P58004 480 aaPredicted RBP4.88□□□□□ -1.63
GPHN-214ENST00000556633 PCOLCEQ15113 449 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 MINDY4Q4G0A6 757 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 GPR155Q7Z3F1 870 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 CATIPQ7Z7H3 387 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 REXO1L1PQ8IX06 675 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 POU5F2Q8N7G0 328 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 TXNDC5Q8NBS9 432 aaKnown RBP4.88□□□□□ -1.63
GPHN-214ENST00000556633 ADAMTS17Q8TE56 1095 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 AJUBAQ96IF1 538 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 PAWRQ96IZ0 340 aaKnown RBP4.88□□□□□ -1.63
GPHN-214ENST00000556633 CARD11Q9BXL7 1154 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 KATNBL1Q9H079 304 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 KIAA1683Q9H0B3 1180 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 BARX1Q9HBU1 254 aaPredicted RBP4.88□□□□□ -1.63
GPHN-214ENST00000556633 NMRK2Q9NPI5 230 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 ANLNQ9NQW6 1124 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 GABBR1Q9UBS5 961 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 SCOCQ9UIL1 159 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 INTUQ9ULD6 942 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 FAM184BQ9ULE4 1060 aa4.88□□□□□ -1.63
GPHN-214ENST00000556633 ADAMTS20P59510 1910 aa4.87□□□□□ -1.63
GPHN-214ENST00000556633 A0A1W2PR48 441 aa4.87□□□□□ -1.63
GPHN-214ENST00000556633 VSTM5A8MXK1 200 aa4.87□□□□□ -1.63
GPHN-214ENST00000556633 DAPK3O43293 454 aa4.87□□□□□ -1.63
GPHN-214ENST00000556633 AP1G1O43747 822 aa4.87□□□□□ -1.63
GPHN-214ENST00000556633 TMEM127O75204 238 aa4.87□□□□□ -1.63
GPHN-214ENST00000556633 ZNF888P0CJ79 500 aaPredicted RBP4.87□□□□□ -1.63
GPHN-214ENST00000556633 GSPT1P15170 499 aaKnown RBP4.87□□□□□ -1.63
GPHN-214ENST00000556633 CSF2RBP32927 897 aa4.87□□□□□ -1.63
GPHN-214ENST00000556633 MRE11P49959 708 aa4.87□□□□□ -1.63
GPHN-214ENST00000556633 MEF2AQ02078 507 aaPredicted RBP4.87□□□□□ -1.63
GPHN-214ENST00000556633 PPP3CAQ08209 521 aa4.87□□□□□ -1.63
GPHN-214ENST00000556633 ADAM15Q13444 863 aa4.87□□□□□ -1.63
GPHN-214ENST00000556633 ZNF267Q14586 743 aaPredicted RBP4.87□□□□□ -1.63
GPHN-214ENST00000556633 USP10Q14694 798 aaKnown RBP4.87□□□□□ -1.63
GPHN-214ENST00000556633 NOMO1Q15155 1222 aa4.87□□□□□ -1.63
GPHN-214ENST00000556633 PKN1Q16512 942 aa4.87□□□□□ -1.63
GPHN-214ENST00000556633 VMACQ2NL98 169 aa4.87□□□□□ -1.63
GPHN-214ENST00000556633 LILRA6Q6PI73 481 aa4.87□□□□□ -1.63
GPHN-214ENST00000556633 CLEC14AQ86T13 490 aa4.87□□□□□ -1.63
GPHN-214ENST00000556633 UNC5BQ8IZJ1 945 aa4.87□□□□□ -1.63
GPHN-214ENST00000556633 KLHL36Q8N4N3 616 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms