RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 SLC24A5Q71RS6 500 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 MIER3Q7Z3K6 550 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 FAM228AQ86W67 206 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 FAM178BQ8IXR5 827 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 BLIDQ8IZY5 108 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 GJD3Q8N144 294 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 KLHL23Q8NBE8 558 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 NEK9Q8TD19 979 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 MICAL1Q8TDZ2 1067 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 UBE2Q2Q8WVN8 375 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 SLC5A5Q92911 643 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 ZNF274Q96GC6 653 aaPredicted RBP7.54□□□□□ -1.2
PSEN1-216ENST00000556066 AIFM3Q96NN9 605 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 RIT2Q99578 217 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 C22orf23Q9BZE7 217 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 TM6SF1Q9BZW5 370 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 RGS18Q9NS28 235 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 C1orf112Q9NSG2 853 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 KCNJ14Q9UNX9 436 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 PLAGL2Q9UPG8 496 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 FAM50BQ9Y247 325 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 C5orf42Q9H799 3197 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 TMEM150BA6NC51 233 aa7.53□□□□□ -1.2
PSEN1-216ENST00000556066 C9IYK1 514 aa7.53□□□□□ -1.2
PSEN1-216ENST00000556066 RNF223E7ERA6 249 aa7.53□□□□□ -1.2
PSEN1-216ENST00000556066 LINC01565O15544 149 aa7.53□□□□□ -1.2
PSEN1-216ENST00000556066 EPB41L2O43491 1005 aaKnown RBP7.53□□□□□ -1.2
PSEN1-216ENST00000556066 NCK2O43639 380 aa7.53□□□□□ -1.2
PSEN1-216ENST00000556066 GPR32O75388 356 aa7.53□□□□□ -1.2
PSEN1-216ENST00000556066 FGFR1P11362 822 aa7.53□□□□□ -1.2
PSEN1-216ENST00000556066 ZSCAN20P17040 1043 aaPredicted RBP7.53□□□□□ -1.2
PSEN1-216ENST00000556066 DNAJB1P25685 340 aa7.53□□□□□ -1.2
PSEN1-216ENST00000556066 RFC5P40937 340 aa7.53□□□□□ -1.2
PSEN1-216ENST00000556066 NDUFV1P49821 464 aa7.53□□□□□ -1.2
PSEN1-216ENST00000556066 DLX2Q07687 328 aaPredicted RBP7.53□□□□□ -1.2
PSEN1-216ENST00000556066 NONOQ15233 471 aaKnown RBP eCLIP7.53□□□□□ -1.2
PSEN1-216ENST00000556066 INF2Q27J81 1249 aa7.53□□□□□ -1.2
PSEN1-216ENST00000556066 LETM2Q2VYF4 491 aa7.53□□□□□ -1.2
PSEN1-216ENST00000556066 PUS10Q3MIT2 529 aaKnown RBP7.53□□□□□ -1.2
PSEN1-216ENST00000556066 MTERF2Q49AM1 385 aa7.53□□□□□ -1.2
PSEN1-216ENST00000556066 RBM23Q86U06 439 aaKnown RBP7.53□□□□□ -1.2
PSEN1-216ENST00000556066 CRIPAKQ8N1N5 446 aa7.53□□□□□ -1.2
PSEN1-216ENST00000556066 RNF169Q8NCN4 708 aa7.53□□□□□ -1.2
PSEN1-216ENST00000556066 SPPL3Q8TCT6 385 aa7.53□□□□□ -1.2
PSEN1-216ENST00000556066 POF1BQ8WVV4 589 aa7.53□□□□□ -1.2
PSEN1-216ENST00000556066 P2RX5Q93086 422 aa7.53□□□□□ -1.2
PSEN1-216ENST00000556066 PPP2R3CQ969Q6 453 aa7.53□□□□□ -1.2
PSEN1-216ENST00000556066 SH2D3AQ9BRG2 576 aa7.53□□□□□ -1.2
PSEN1-216ENST00000556066 SLKQ9H2G2 1235 aaPredicted RBP7.53□□□□□ -1.2
PSEN1-216ENST00000556066 ATP6V0A4Q9HBG4 840 aa7.53□□□□□ -1.2
PSEN1-216ENST00000556066 AAASQ9NRG9 546 aa7.53□□□□□ -1.2
PSEN1-216ENST00000556066 DDX25Q9UHL0 483 aaKnown RBP7.53□□□□□ -1.2
PSEN1-216ENST00000556066 PCDHB12Q9Y5F1 795 aa7.53□□□□□ -1.2
PSEN1-216ENST00000556066 ZNF318Q5VUA4 2279 aa7.52□□□□□ -1.21
PSEN1-216ENST00000556066 CCDC194A0A1B0GVG4 234 aa7.52□□□□□ -1.21
PSEN1-216ENST00000556066 MARCH6O60337 910 aa7.52□□□□□ -1.21
PSEN1-216ENST00000556066 CSDE1O75534 798 aaKnown RBP7.52□□□□□ -1.21
PSEN1-216ENST00000556066 PSMD10O75832 226 aa7.52□□□□□ -1.21
PSEN1-216ENST00000556066 CDKL5O76039 1030 aa7.52□□□□□ -1.21
PSEN1-216ENST00000556066 XBP1P17861 261 aa7.52□□□□□ -1.21
PSEN1-216ENST00000556066 FGFR4P22455 802 aa7.52□□□□□ -1.21
PSEN1-216ENST00000556066 EIF4BP23588 611 aaKnown RBP7.52□□□□□ -1.21
PSEN1-216ENST00000556066 IRS1P35568 1242 aa7.52□□□□□ -1.21
PSEN1-216ENST00000556066 LTBRP36941 435 aa7.52□□□□□ -1.21
PSEN1-216ENST00000556066 NRIP1P48552 1158 aa7.52□□□□□ -1.21
PSEN1-216ENST00000556066 SCRN1Q12765 414 aa7.52□□□□□ -1.21
PSEN1-216ENST00000556066 CAMK1Q14012 370 aa7.52□□□□□ -1.21
PSEN1-216ENST00000556066 Q4G0T1 1027 aa7.52□□□□□ -1.21
PSEN1-216ENST00000556066 NAALADL2Q58DX5 795 aa7.52□□□□□ -1.21
PSEN1-216ENST00000556066 GALNT17Q6IS24 598 aa7.52□□□□□ -1.21
PSEN1-216ENST00000556066 KRT25Q7Z3Z0 450 aa7.52□□□□□ -1.21
PSEN1-216ENST00000556066 ADGRD2Q7Z7M1 963 aa7.52□□□□□ -1.21
PSEN1-216ENST00000556066 THNSL1Q8IYQ7 743 aa7.52□□□□□ -1.21
PSEN1-216ENST00000556066 ABI1Q8IZP0 508 aa7.52□□□□□ -1.21
PSEN1-216ENST00000556066 DAGLBQ8NCG7 672 aa7.52□□□□□ -1.21
PSEN1-216ENST00000556066 ADAMTS10Q9H324 1103 aa7.52□□□□□ -1.21
PSEN1-216ENST00000556066 GJB4Q9NTQ9 266 aa7.52□□□□□ -1.21
PSEN1-216ENST00000556066 TYW1Q9NV66 732 aaKnown RBP7.52□□□□□ -1.21
PSEN1-216ENST00000556066 TMEM161AQ9NX61 479 aa7.52□□□□□ -1.21
PSEN1-216ENST00000556066 PCDHGC5Q9Y5F6 944 aa7.52□□□□□ -1.21
PSEN1-216ENST00000556066 ARID2Q68CP9 1835 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 CYP3A7-CYP3A51PA0A087WV96 503 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 PRR33A8MZF0 331 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 M0R2N6 131 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 PER2O15055 1255 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 SLC37A4O43826 429 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 CCNT1O60563 726 aaKnown RBP7.51□□□□□ -1.21
PSEN1-216ENST00000556066 TBX10O75333 385 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 FGF18O76093 207 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 DARSP14868 501 aaKnown RBP7.51□□□□□ -1.21
PSEN1-216ENST00000556066 CYP3A7P24462 503 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 MRE11P49959 708 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 DNM2P50570 870 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 GPC3P51654 580 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 ADAM15Q13444 863 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 DRP2Q13474 957 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 DSC3Q14574 896 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 COL19A1Q14993 1142 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 NPY5RQ15761 445 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 CTC1Q2NKJ3 1217 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms