RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 NPEPPSP55786 919 aa22.07■■□□□ 1.12
PRKCH-219ENST00000555906 SPIRE1Q08AE8 756 aa22.07■■□□□ 1.12
PRKCH-219ENST00000555906 EPHA7Q15375 998 aa22.07■■□□□ 1.12
PRKCH-219ENST00000555906 EARS2Q5JPH6 523 aaKnown RBP22.07■■□□□ 1.12
PRKCH-219ENST00000555906 GLB1LQ6UWU2 654 aa22.07■■□□□ 1.12
PRKCH-219ENST00000555906 SLFN12Q8IYM2 578 aa22.07■■□□□ 1.12
PRKCH-219ENST00000555906 GTF3C6Q969F1 213 aa22.07■■□□□ 1.12
PRKCH-219ENST00000555906 BRMS1Q9HCU9 246 aa22.07■■□□□ 1.12
PRKCH-219ENST00000555906 WDFY4Q6ZS81 3184 aa22.06■■□□□ 1.12
PRKCH-219ENST00000555906 ZNF623O75123 536 aa22.06■■□□□ 1.12
PRKCH-219ENST00000555906 HOXB8P17481 243 aaPredicted RBP22.06■■□□□ 1.12
PRKCH-219ENST00000555906 HOXD11P31277 338 aaPredicted RBP22.06■■□□□ 1.12
PRKCH-219ENST00000555906 YWHABP31946 246 aaKnown RBP22.06■■□□□ 1.12
PRKCH-219ENST00000555906 TECP42680 631 aa22.06■■□□□ 1.12
PRKCH-219ENST00000555906 NCAPH2Q6IBW4 605 aa22.06■■□□□ 1.12
PRKCH-219ENST00000555906 CASP10Q92851 521 aa22.06■■□□□ 1.12
PRKCH-219ENST00000555906 TNFRSF25Q93038 417 aa22.06■■□□□ 1.12
PRKCH-219ENST00000555906 LPPQ93052 612 aa22.06■■□□□ 1.12
PRKCH-219ENST00000555906 TMEM169Q96HH4 297 aa22.06■■□□□ 1.12
PRKCH-219ENST00000555906 S1PR5Q9H228 398 aa22.06■■□□□ 1.12
PRKCH-219ENST00000555906 FAM205CA6NFA0 338 aa22.05■■□□□ 1.12
PRKCH-219ENST00000555906 C2orf71A6NGG8 1288 aa22.05■■□□□ 1.12
PRKCH-219ENST00000555906 MARCH6O60337 910 aa22.05■■□□□ 1.12
PRKCH-219ENST00000555906 ZC3H11AO75152 810 aaKnown RBP eCLIP22.05■■□□□ 1.12
PRKCH-219ENST00000555906 FDPSP14324 419 aaKnown RBP22.05■■□□□ 1.12
PRKCH-219ENST00000555906 NR5A1Q13285 461 aa22.05■■□□□ 1.12
PRKCH-219ENST00000555906 EMC2Q15006 297 aa22.05■■□□□ 1.12
PRKCH-219ENST00000555906 LLGL2Q6P1M3 1020 aa22.05■■□□□ 1.12
PRKCH-219ENST00000555906 SYCE2Q6PIF2 218 aa22.05■■□□□ 1.12
PRKCH-219ENST00000555906 HFE2Q6ZVN8 426 aa22.05■■□□□ 1.12
PRKCH-219ENST00000555906 SRGAP1Q7Z6B7 1085 aa22.05■■□□□ 1.12
PRKCH-219ENST00000555906 MRPL43Q8N983 215 aaKnown RBP22.05■■□□□ 1.12
PRKCH-219ENST00000555906 ZNF579Q8NAF0 562 aaKnown RBP22.05■■□□□ 1.12
PRKCH-219ENST00000555906 EDAQ92838 391 aa22.05■■□□□ 1.12
PRKCH-219ENST00000555906 KCNH6Q9H252 994 aa22.05■■□□□ 1.12
PRKCH-219ENST00000555906 ZSWIM4Q9H7M6 989 aa22.05■■□□□ 1.12
PRKCH-219ENST00000555906 TBC1D13Q9NVG8 400 aa22.05■■□□□ 1.12
PRKCH-219ENST00000555906 DTNBO60941 627 aa22.04■■□□□ 1.12
PRKCH-219ENST00000555906 BAG4O95429 457 aaKnown RBP22.04■■□□□ 1.12
PRKCH-219ENST00000555906 LARGE1O95461 756 aa22.04■■□□□ 1.12
PRKCH-219ENST00000555906 BMS1Q14692 1282 aaKnown RBP22.04■■□□□ 1.12
PRKCH-219ENST00000555906 NOMO2Q5JPE7 1267 aa22.04■■□□□ 1.12
PRKCH-219ENST00000555906 OTUD6AQ7L8S5 288 aa22.04■■□□□ 1.12
PRKCH-219ENST00000555906 TCP11Q8WWU5 503 aa22.04■■□□□ 1.12
PRKCH-219ENST00000555906 PRPF31Q8WWY3 499 aaKnown RBP22.04■■□□□ 1.12
PRKCH-219ENST00000555906 TMEM143Q96AN5 459 aa22.04■■□□□ 1.12
PRKCH-219ENST00000555906 PGBD4Q96DM1 585 aa22.04■■□□□ 1.12
PRKCH-219ENST00000555906 ZBP1Q9H171 429 aa22.04■■□□□ 1.12
PRKCH-219ENST00000555906 RGL1Q9NZL6 768 aa22.04■■□□□ 1.12
PRKCH-219ENST00000555906 HCFC2Q9Y5Z7 792 aa22.04■■□□□ 1.12
PRKCH-219ENST00000555906 DENND4AQ7Z401 1863 aa22.03■■□□□ 1.12
PRKCH-219ENST00000555906 KMT2EQ8IZD2 1858 aa22.03■■□□□ 1.12
PRKCH-219ENST00000555906 MEIS3P2A8K0S8 358 aa22.03■■□□□ 1.12
PRKCH-219ENST00000555906 NT5C1B-RDH14C9J2C7 533 aa22.03■■□□□ 1.12
PRKCH-219ENST00000555906 CYP4A11Q02928 519 aa22.03■■□□□ 1.12
PRKCH-219ENST00000555906 LAMTOR4Q0VGL1 99 aa22.03■■□□□ 1.12
PRKCH-219ENST00000555906 ME3Q16798 604 aa22.03■■□□□ 1.12
PRKCH-219ENST00000555906 TMEM173Q86WV6 379 aaPredicted RBP22.03■■□□□ 1.12
PRKCH-219ENST00000555906 NSUN7Q8NE18 718 aaKnown RBP22.03■■□□□ 1.12
PRKCH-219ENST00000555906 DYDC2Q96IM9 177 aa22.03■■□□□ 1.12
PRKCH-219ENST00000555906 RPGRIP1Q96KN7 1286 aa22.03■■□□□ 1.12
PRKCH-219ENST00000555906 BMP2KQ9NSY1 1161 aaPredicted RBP22.03■■□□□ 1.12
PRKCH-219ENST00000555906 PPP4R2Q9NY27 417 aa22.03■■□□□ 1.12
PRKCH-219ENST00000555906 INPP5FQ9Y2H2 1132 aa22.03■■□□□ 1.12
PRKCH-219ENST00000555906 PCDHB2Q9Y5E7 798 aa22.03■■□□□ 1.12
PRKCH-219ENST00000555906 CNTNAP2Q9UHC6 1331 aa22.03■■□□□ 1.12
PRKCH-219ENST00000555906 ASAP2O43150 1006 aa22.02■■□□□ 1.12
PRKCH-219ENST00000555906 OFD1O75665 1012 aa22.02■■□□□ 1.12
PRKCH-219ENST00000555906 CTTNQ14247 550 aaKnown RBP22.02■■□□□ 1.12
PRKCH-219ENST00000555906 LONRF3Q496Y0 759 aa22.02■■□□□ 1.12
PRKCH-219ENST00000555906 TPRNQ4KMQ1 711 aa22.02■■□□□ 1.12
PRKCH-219ENST00000555906 FERMT3Q86UX7 667 aa22.02■■□□□ 1.12
PRKCH-219ENST00000555906 NECAB1Q8N987 351 aa22.02■■□□□ 1.12
PRKCH-219ENST00000555906 IGSF21Q96ID5 467 aa22.02■■□□□ 1.12
PRKCH-219ENST00000555906 MFSD14AQ96MC6 490 aa22.02■■□□□ 1.12
PRKCH-219ENST00000555906 MTRQ99707 1265 aa22.02■■□□□ 1.12
PRKCH-219ENST00000555906 NRDE2Q9H7Z3 1164 aa22.02■■□□□ 1.12
PRKCH-219ENST00000555906 MINDY3Q9H8M7 445 aa22.02■■□□□ 1.12
PRKCH-219ENST00000555906 IRAK3Q9Y616 596 aa22.02■■□□□ 1.12
PRKCH-219ENST00000555906 TDRD15B5MCY1 1934 aaKnown RBP22.02■■□□□ 1.11
PRKCH-219ENST00000555906 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.01■■□□□ 1.11
PRKCH-219ENST00000555906 CLASP2O75122 1294 aaKnown RBP22.01■■□□□ 1.11
PRKCH-219ENST00000555906 SRGAP2CP0DJJ0 459 aa22.01■■□□□ 1.11
PRKCH-219ENST00000555906 CTSAP10619 480 aa22.01■■□□□ 1.11
PRKCH-219ENST00000555906 ZXDAP98168 799 aa22.01■■□□□ 1.11
PRKCH-219ENST00000555906 RNASELQ05823 741 aaKnown RBP22.01■■□□□ 1.11
PRKCH-219ENST00000555906 GIT2Q14161 759 aa22.01■■□□□ 1.11
PRKCH-219ENST00000555906 PCBP1Q15365 356 aaKnown RBP eCLIP22.01■■□□□ 1.11
PRKCH-219ENST00000555906 XKR9Q5GH70 373 aa22.01■■□□□ 1.11
PRKCH-219ENST00000555906 BMP8AQ7Z5Y6 402 aa22.01■■□□□ 1.11
PRKCH-219ENST00000555906 MRPL10Q7Z7H8 261 aaKnown RBP22.01■■□□□ 1.11
PRKCH-219ENST00000555906 DDX53Q86TM3 631 aaKnown RBP22.01■■□□□ 1.11
PRKCH-219ENST00000555906 VPS52Q8N1B4 723 aa22.01■■□□□ 1.11
PRKCH-219ENST00000555906 RNF149Q8NC42 400 aa22.01■■□□□ 1.11
PRKCH-219ENST00000555906 URGCPQ8TCY9 931 aa22.01■■□□□ 1.11
PRKCH-219ENST00000555906 RSAD1Q9HA92 442 aa22.01■■□□□ 1.11
PRKCH-219ENST00000555906 EIF5BO60841 1220 aaKnown RBP22■■□□□ 1.11
PRKCH-219ENST00000555906 LYPLA2O95372 231 aa22■■□□□ 1.11
PRKCH-219ENST00000555906 GALTP07902 379 aa22■■□□□ 1.11
PRKCH-219ENST00000555906 CA8P35219 290 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms