RNA–Protein interactions for RNA: ENST00000555668.5

GPHN-210, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-210ENST00000555668 TNMDQ9H2S6 317 aa4.48□□□□□ -1.69
GPHN-210ENST00000555668 ACTR5Q9H9F9 607 aaPredicted RBP4.48□□□□□ -1.69
GPHN-210ENST00000555668 ZNF304Q9HCX3 659 aa4.48□□□□□ -1.69
GPHN-210ENST00000555668 GCM1Q9NP62 436 aa4.48□□□□□ -1.69
GPHN-210ENST00000555668 SLC39A2Q9NP94 309 aa4.48□□□□□ -1.69
GPHN-210ENST00000555668 SIRT5Q9NXA8 310 aa4.48□□□□□ -1.69
GPHN-210ENST00000555668 IL20Q9NYY1 176 aa4.48□□□□□ -1.69
GPHN-210ENST00000555668 HOOK1Q9UJC3 728 aaKnown RBP4.48□□□□□ -1.69
GPHN-210ENST00000555668 GGA2Q9UJY4 613 aa4.48□□□□□ -1.69
GPHN-210ENST00000555668 CFAP45Q9UL16 551 aa4.48□□□□□ -1.69
GPHN-210ENST00000555668 CNOT6Q9ULM6 557 aaKnown RBP4.48□□□□□ -1.69
GPHN-210ENST00000555668 PRELID1Q9Y255 219 aa4.48□□□□□ -1.69
GPHN-210ENST00000555668 GPR55Q9Y2T6 319 aaPredicted RBP4.48□□□□□ -1.69
GPHN-210ENST00000555668 PCDHGB7Q9Y5F8 929 aa4.48□□□□□ -1.69
GPHN-210ENST00000555668 TAF6LQ9Y6J9 622 aa4.48□□□□□ -1.69
GPHN-210ENST00000555668 RTL1A6NKG5 1358 aa4.48□□□□□ -1.69
GPHN-210ENST00000555668 ATAD2BQ9ULI0 1458 aa4.48□□□□□ -1.69
GPHN-210ENST00000555668 GCC2Q8IWJ2 1684 aa4.48□□□□□ -1.69
GPHN-210ENST00000555668 PHLPP2Q6ZVD8 1323 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 MYBBP1AQ9BQG0 1328 aaKnown RBP4.47□□□□□ -1.69
GPHN-210ENST00000555668 NPATQ14207 1427 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 ZNF608Q9ULD9 1512 aaPredicted RBP4.47□□□□□ -1.69
GPHN-210ENST00000555668 KIF14Q15058 1648 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 A0A1W2PQ45 241 aaPredicted RBP4.47□□□□□ -1.69
GPHN-210ENST00000555668 A0A1W2PQY0 241 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 CCDC151A5D8V7 595 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 LRRIQ3A6PVS8 624 aaPredicted RBP4.47□□□□□ -1.69
GPHN-210ENST00000555668 B4DLN1 442 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 C9IYK1 514 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 CHL1O00533 1208 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 MAP2K7O14733 419 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 WDR46O15213 610 aaKnown RBP4.47□□□□□ -1.69
GPHN-210ENST00000555668 CYP27B1O15528 508 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 DIAPH2O60879 1101 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 SHOX2O60902 331 aaPredicted RBP4.47□□□□□ -1.69
GPHN-210ENST00000555668 GSNP06396 782 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 VIMP08670 466 aaKnown RBP4.47□□□□□ -1.69
GPHN-210ENST00000555668 TCF3P15923 654 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 IL4RP24394 825 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 ARL4AP40617 200 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 KCNJ6P48051 423 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 SCNN1BP51168 640 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 PPIDQ08752 370 aaKnown RBP4.47□□□□□ -1.69
GPHN-210ENST00000555668 COX10Q12887 443 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 CBX3Q13185 183 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 LAPTM5Q13571 262 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 WHAMMP3Q1A5X7 153 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 ALDH1L2Q3SY69 923 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 HSF5Q4G112 596 aaPredicted RBP4.47□□□□□ -1.69
GPHN-210ENST00000555668 ANKRD39Q53RE8 183 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 CCDC93Q567U6 631 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 ZNF385BQ569K4 471 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 THEMIS2Q5TEJ8 643 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 VPS53Q5VIR6 699 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 OLFML2BQ68BL8 750 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 CRTC3Q6UUV7 619 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 ZNF662Q6ZS27 426 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 NANOGNBQ7Z5D8 188 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 KRT77Q7Z794 578 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 HOOK3Q86VS8 718 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 SLC7A5P1Q8MH63 180 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 NDUFAF2Q8N183 169 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 CHCHD4Q8N4Q1 142 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 RBBP8NLQ8NC74 664 aaPredicted RBP4.47□□□□□ -1.69
GPHN-210ENST00000555668 MSANTD4Q8NCY6 345 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 KLHDC4Q8TBB5 520 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 CCDC110Q8TBZ0 833 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 HNRNPLLQ8WVV9 542 aaKnown RBP4.47□□□□□ -1.69
GPHN-210ENST00000555668 APPBP2Q92624 585 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 EPSTI1Q96J88 318 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 RNPC3Q96LT9 517 aaKnown RBP4.47□□□□□ -1.69
GPHN-210ENST00000555668 CTAGE1Q96RT6 745 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 SMC6Q96SB8 1091 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 MAP3K14Q99558 947 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 CGREF1Q99674 301 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 UPF3BQ9BZI7 483 aaKnown RBP4.47□□□□□ -1.69
GPHN-210ENST00000555668 SLC7A5P2Q9GIP4 190 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 GBP3Q9H0R5 595 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 AS3MTQ9HBK9 375 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 CD248Q9HCU0 757 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 HELLSQ9NRZ9 838 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 ERVK13-1Q9NX77 482 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 VPS18Q9P253 973 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 DDX20Q9UHI6 824 aaKnown RBP4.47□□□□□ -1.69
GPHN-210ENST00000555668 DNAI1Q9UI46 699 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 DIS3Q9Y2L1 958 aaKnown RBP4.47□□□□□ -1.69
GPHN-210ENST00000555668 SPO11Q9Y5K1 396 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 BZW2Q9Y6E2 419 aaKnown RBP4.47□□□□□ -1.69
GPHN-210ENST00000555668 CAPN7Q9Y6W3 813 aa4.47□□□□□ -1.69
GPHN-210ENST00000555668 RASSF10A6NK89 507 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 TTC34A8MYJ7 566 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 RFXAPO00287 272 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 NDUFAB1O14561 156 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 SHOXO15266 292 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 SGTAO43765 313 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 MGRN1O60291 552 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 HIP1RO75146 1068 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 RASSF9O75901 435 aa4.46□□□□□ -1.7
GPHN-210ENST00000555668 DNAJC8O75937 253 aaPredicted RBP4.46□□□□□ -1.7
GPHN-210ENST00000555668 NPTXRO95502 500 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms