RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 BEND2Q8NDZ0 799 aa5.64□□□□□ -1.51
SCFD1-216ENST00000555550 WDR92Q96MX6 357 aa5.64□□□□□ -1.51
SCFD1-216ENST00000555550 ADARB2Q9NS39 739 aaKnown RBP5.64□□□□□ -1.51
SCFD1-216ENST00000555550 HS3ST4Q9Y661 456 aa5.64□□□□□ -1.51
SCFD1-216ENST00000555550 M0R2C6 588 aa5.63□□□□□ -1.51
SCFD1-216ENST00000555550 SCAF4O95104 1147 aaKnown RBP5.63□□□□□ -1.51
SCFD1-216ENST00000555550 PRLP01236 227 aa5.63□□□□□ -1.51
SCFD1-216ENST00000555550 ZFP36P26651 326 aaKnown RBP5.63□□□□□ -1.51
SCFD1-216ENST00000555550 FLT3P36888 993 aa5.63□□□□□ -1.51
SCFD1-216ENST00000555550 ROM1Q03395 351 aa5.63□□□□□ -1.51
SCFD1-216ENST00000555550 TIGD2Q4W5G0 525 aa5.63□□□□□ -1.51
SCFD1-216ENST00000555550 HECTD2Q5U5R9 776 aa5.63□□□□□ -1.51
SCFD1-216ENST00000555550 CC2D1AQ6P1N0 951 aaPredicted RBP5.63□□□□□ -1.51
SCFD1-216ENST00000555550 LRRC55Q6ZSA7 311 aa5.63□□□□□ -1.51
SCFD1-216ENST00000555550 GLCCI1Q86VQ1 547 aa5.63□□□□□ -1.51
SCFD1-216ENST00000555550 PRIMA1Q86XR5 153 aa5.63□□□□□ -1.51
SCFD1-216ENST00000555550 ADGRG3Q86Y34 549 aa5.63□□□□□ -1.51
SCFD1-216ENST00000555550 CMTM4Q8IZR5 234 aa5.63□□□□□ -1.51
SCFD1-216ENST00000555550 ST8SIA2Q92186 375 aa5.63□□□□□ -1.51
SCFD1-216ENST00000555550 CLUHP3Q96NS8 147 aa5.63□□□□□ -1.51
SCFD1-216ENST00000555550 ZNF768Q9H5H4 540 aaKnown RBP5.63□□□□□ -1.51
SCFD1-216ENST00000555550 PIF1Q9H611 641 aa5.63□□□□□ -1.51
SCFD1-216ENST00000555550 KANSL2Q9H9L4 492 aa5.63□□□□□ -1.51
SCFD1-216ENST00000555550 SAMD15Q9P1V8 674 aa5.63□□□□□ -1.51
SCFD1-216ENST00000555550 TNPO3Q9Y5L0 923 aaKnown RBP5.63□□□□□ -1.51
SCFD1-216ENST00000555550 PPP1R12AO14974 1030 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-216ENST00000555550 DAPK3O43293 454 aa5.62□□□□□ -1.51
SCFD1-216ENST00000555550 B3GALT2O43825 422 aa5.62□□□□□ -1.51
SCFD1-216ENST00000555550 IPO13O94829 963 aaKnown RBP5.62□□□□□ -1.51
SCFD1-216ENST00000555550 ASLP04424 464 aa5.62□□□□□ -1.51
SCFD1-216ENST00000555550 JUNP05412 331 aaKnown RBP5.62□□□□□ -1.51
SCFD1-216ENST00000555550 RANGAP1P46060 587 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-216ENST00000555550 FAM214AQ32MH5 1076 aa5.62□□□□□ -1.51
SCFD1-216ENST00000555550 STRIP1Q5VSL9 837 aa5.62□□□□□ -1.51
SCFD1-216ENST00000555550 ZCCHC8Q6NZY4 707 aaKnown RBP5.62□□□□□ -1.51
SCFD1-216ENST00000555550 DYDC2Q96IM9 177 aa5.62□□□□□ -1.51
SCFD1-216ENST00000555550 MAML3Q96JK9 1138 aa5.62□□□□□ -1.51
SCFD1-216ENST00000555550 BOCQ9BWV1 1114 aa5.62□□□□□ -1.51
SCFD1-216ENST00000555550 CABP5Q9NP86 173 aa5.62□□□□□ -1.51
SCFD1-216ENST00000555550 LPXNO60711 386 aa5.61□□□□□ -1.51
SCFD1-216ENST00000555550 GNAT2P19087 354 aa5.61□□□□□ -1.51
SCFD1-216ENST00000555550 CLK3P49761 638 aaKnown RBP5.61□□□□□ -1.51
SCFD1-216ENST00000555550 NPEPPSP55786 919 aa5.61□□□□□ -1.51
SCFD1-216ENST00000555550 ARHGAP44Q17R89 818 aa5.61□□□□□ -1.51
SCFD1-216ENST00000555550 PIK3R6Q5UE93 754 aa5.61□□□□□ -1.51
SCFD1-216ENST00000555550 SLFN12LQ6IEE8 588 aa5.61□□□□□ -1.51
SCFD1-216ENST00000555550 UBE2R2Q712K3 238 aaPredicted RBP5.61□□□□□ -1.51
SCFD1-216ENST00000555550 FAM193BQ96PV7 902 aaPredicted RBP5.61□□□□□ -1.51
SCFD1-216ENST00000555550 TOR3AQ9H497 397 aa5.61□□□□□ -1.51
SCFD1-216ENST00000555550 CYP4F11Q9HBI6 524 aa5.61□□□□□ -1.51
SCFD1-216ENST00000555550 TMEM260Q9NX78 707 aa5.61□□□□□ -1.51
SCFD1-216ENST00000555550 KCMF1Q9P0J7 381 aa5.61□□□□□ -1.51
SCFD1-216ENST00000555550 CENPVL1A0A0U1RR11 272 aa5.6□□□□□ -1.51
SCFD1-216ENST00000555550 DVL2O14641 736 aa5.6□□□□□ -1.51
SCFD1-216ENST00000555550 DNAJC8O75937 253 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-216ENST00000555550 GLRX3O76003 335 aaKnown RBP5.6□□□□□ -1.51
SCFD1-216ENST00000555550 KIR2DL3P43628 341 aa5.6□□□□□ -1.51
SCFD1-216ENST00000555550 KIF11P52732 1056 aa5.6□□□□□ -1.51
SCFD1-216ENST00000555550 PABPC4Q13310 644 aaKnown RBP eCLIP5.6□□□□□ -1.51
SCFD1-216ENST00000555550 SPIDRQ14159 915 aa5.6□□□□□ -1.51
SCFD1-216ENST00000555550 ZNF460Q14592 562 aa5.6□□□□□ -1.51
SCFD1-216ENST00000555550 PLEKHG4Q58EX7 1191 aa5.6□□□□□ -1.51
SCFD1-216ENST00000555550 COLEC12Q5KU26 742 aa5.6□□□□□ -1.51
SCFD1-216ENST00000555550 NAIF1Q69YI7 327 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-216ENST00000555550 SYCE2Q6PIF2 218 aa5.6□□□□□ -1.51
SCFD1-216ENST00000555550 HOMER1Q86YM7 354 aa5.6□□□□□ -1.51
SCFD1-216ENST00000555550 CHST14Q8NCH0 376 aa5.6□□□□□ -1.51
SCFD1-216ENST00000555550 E2F7Q96AV8 911 aa5.6□□□□□ -1.51
SCFD1-216ENST00000555550 PCIF1Q9H4Z3 704 aa5.6□□□□□ -1.51
SCFD1-216ENST00000555550 POLR3BQ9NW08 1133 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-216ENST00000555550 COL11A2P13942 1736 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-216ENST00000555550 PTPDC1A2A3K4 754 aa5.59□□□□□ -1.51
SCFD1-216ENST00000555550 RECQL4O94761 1208 aa5.59□□□□□ -1.51
SCFD1-216ENST00000555550 JMJD7P0C870 316 aa5.59□□□□□ -1.51
SCFD1-216ENST00000555550 LAG3P18627 525 aa5.59□□□□□ -1.51
SCFD1-216ENST00000555550 SDSP20132 328 aa5.59□□□□□ -1.51
SCFD1-216ENST00000555550 FAM189BP81408 668 aa5.59□□□□□ -1.51
SCFD1-216ENST00000555550 TCEA2Q15560 299 aa5.59□□□□□ -1.51
SCFD1-216ENST00000555550 ZNF174Q15697 407 aa5.59□□□□□ -1.51
SCFD1-216ENST00000555550 PRAMEF9Q5VWM5 478 aa5.59□□□□□ -1.51
SCFD1-216ENST00000555550 APPBP2Q92624 585 aa5.59□□□□□ -1.51
SCFD1-216ENST00000555550 TUBGCP5Q96RT8 1024 aa5.59□□□□□ -1.51
SCFD1-216ENST00000555550 ANKFY1Q9P2R3 1169 aa5.59□□□□□ -1.51
SCFD1-216ENST00000555550 UBA6A0AVT1 1052 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-216ENST00000555550 AHRRA9YTQ3 701 aa5.58□□□□□ -1.52
SCFD1-216ENST00000555550 H7C1D1 291 aa5.58□□□□□ -1.52
SCFD1-216ENST00000555550 CFBP00751 764 aa5.58□□□□□ -1.52
SCFD1-216ENST00000555550 ZEB1P37275 1124 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-216ENST00000555550 C21orf62-AS1Q17RA5 79 aa5.58□□□□□ -1.52
SCFD1-216ENST00000555550 CFAP100Q494V2 611 aa5.58□□□□□ -1.52
SCFD1-216ENST00000555550 TTC38Q5R3I4 469 aa5.58□□□□□ -1.52
SCFD1-216ENST00000555550 OTOP1Q7RTM1 612 aa5.58□□□□□ -1.52
SCFD1-216ENST00000555550 SYNPOQ8N3V7 929 aa5.58□□□□□ -1.52
SCFD1-216ENST00000555550 RNPC3Q96LT9 517 aaKnown RBP5.58□□□□□ -1.52
SCFD1-216ENST00000555550 CPPED1Q9BRF8 314 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-216ENST00000555550 FANCLQ9NW38 375 aa5.58□□□□□ -1.52
SCFD1-216ENST00000555550 MAGEC2Q9UBF1 373 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-216ENST00000555550 EIF2B4Q9UI10 523 aaKnown RBP5.58□□□□□ -1.52
SCFD1-216ENST00000555550 CD2APQ9Y5K6 639 aa5.58□□□□□ -1.52
SCFD1-216ENST00000555550 HOXA3O43365 443 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms