RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 SETD1BQ9UPS6 1966 aaKnown RBP5.1□□□□□ -1.59
SRP54-207ENST00000555535 PIPSLA2A3N6 862 aa5.09□□□□□ -1.59
SRP54-207ENST00000555535 KCNK3O14649 394 aa5.09□□□□□ -1.59
SRP54-207ENST00000555535 NRP1O14786 923 aa5.09□□□□□ -1.59
SRP54-207ENST00000555535 HIP1RO75146 1068 aa5.09□□□□□ -1.59
SRP54-207ENST00000555535 SRGAP2CP0DJJ0 459 aa5.09□□□□□ -1.59
SRP54-207ENST00000555535 ETFBP38117 255 aa5.09□□□□□ -1.59
SRP54-207ENST00000555535 KIR2DL3P43628 341 aa5.09□□□□□ -1.59
SRP54-207ENST00000555535 DNM2P50570 870 aa5.09□□□□□ -1.59
SRP54-207ENST00000555535 GDF7Q7Z4P5 450 aa5.09□□□□□ -1.59
SRP54-207ENST00000555535 GRASPQ7Z6J2 395 aaPredicted RBP5.09□□□□□ -1.59
SRP54-207ENST00000555535 FAM83AQ86UY5 434 aa5.09□□□□□ -1.59
SRP54-207ENST00000555535 DLG3Q92796 817 aa5.09□□□□□ -1.59
SRP54-207ENST00000555535 CPPED1Q9BRF8 314 aaPredicted RBP5.09□□□□□ -1.59
SRP54-207ENST00000555535 NDC1Q9BTX1 674 aa5.09□□□□□ -1.59
SRP54-207ENST00000555535 DUSP26Q9BV47 211 aa5.09□□□□□ -1.59
SRP54-207ENST00000555535 POLR3BQ9NW08 1133 aaPredicted RBP5.09□□□□□ -1.59
SRP54-207ENST00000555535 RASSF10A6NK89 507 aa5.08□□□□□ -1.6
SRP54-207ENST00000555535 DIRC3C9JPN6 131 aa5.08□□□□□ -1.6
SRP54-207ENST00000555535 ESRRBO95718 433 aa5.08□□□□□ -1.6
SRP54-207ENST00000555535 POU3F3P20264 500 aaPredicted RBP5.08□□□□□ -1.6
SRP54-207ENST00000555535 ABCG1P45844 678 aa5.08□□□□□ -1.6
SRP54-207ENST00000555535 GUCY1B3Q02153 619 aa5.08□□□□□ -1.6
SRP54-207ENST00000555535 FOXI1Q12951 378 aa5.08□□□□□ -1.6
SRP54-207ENST00000555535 VPS72Q15906 364 aa5.08□□□□□ -1.6
SRP54-207ENST00000555535 PLXDC1Q8IUK5 500 aa5.08□□□□□ -1.6
SRP54-207ENST00000555535 ZNF669Q96BR6 464 aaPredicted RBP5.08□□□□□ -1.6
SRP54-207ENST00000555535 DYDC2Q96IM9 177 aa5.08□□□□□ -1.6
SRP54-207ENST00000555535 TRPM5Q9NZQ8 1165 aa5.08□□□□□ -1.6
SRP54-207ENST00000555535 SYNPO2Q9UMS6 1093 aa5.08□□□□□ -1.6
SRP54-207ENST00000555535 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.08□□□□□ -1.6
SRP54-207ENST00000555535 CLCA2Q9UQC9 943 aa5.08□□□□□ -1.6
SRP54-207ENST00000555535 RBMXL2O75526 392 aaKnown RBP5.07□□□□□ -1.6
SRP54-207ENST00000555535 IGLV2-14P01704 120 aa5.07□□□□□ -1.6
SRP54-207ENST00000555535 HLA-DOAP06340 250 aa5.07□□□□□ -1.6
SRP54-207ENST00000555535 PTH2RP49190 550 aa5.07□□□□□ -1.6
SRP54-207ENST00000555535 ZNF81P51508 661 aa5.07□□□□□ -1.6
SRP54-207ENST00000555535 ANTXR2P58335 489 aa5.07□□□□□ -1.6
SRP54-207ENST00000555535 MPP3Q13368 585 aa5.07□□□□□ -1.6
SRP54-207ENST00000555535 BEAN1Q3B7T3 259 aa5.07□□□□□ -1.6
SRP54-207ENST00000555535 BMP8AQ7Z5Y6 402 aa5.07□□□□□ -1.6
SRP54-207ENST00000555535 OR52N2Q8NGI0 321 aa5.07□□□□□ -1.6
SRP54-207ENST00000555535 MAGEL2Q9UJ55 1249 aa5.07□□□□□ -1.6
SRP54-207ENST00000555535 POLR2AP24928 1970 aaKnown RBP5.07□□□□□ -1.6
SRP54-207ENST00000555535 MAFGO15525 162 aa5.06□□□□□ -1.6
SRP54-207ENST00000555535 HOXA3O43365 443 aaPredicted RBP5.06□□□□□ -1.6
SRP54-207ENST00000555535 NDUFA10O95299 355 aa5.06□□□□□ -1.6
SRP54-207ENST00000555535 FAM189BP81408 668 aa5.06□□□□□ -1.6
SRP54-207ENST00000555535 TMEM132BQ14DG7 1078 aa5.06□□□□□ -1.6
SRP54-207ENST00000555535 MAN2A1Q16706 1144 aa5.06□□□□□ -1.6
SRP54-207ENST00000555535 DDR2Q16832 855 aa5.06□□□□□ -1.6
SRP54-207ENST00000555535 CATSPEREQ5SY80 951 aa5.06□□□□□ -1.6
SRP54-207ENST00000555535 YOD1Q5VVQ6 348 aaPredicted RBP5.06□□□□□ -1.6
SRP54-207ENST00000555535 BRAPQ7Z569 592 aa5.06□□□□□ -1.6
SRP54-207ENST00000555535 RTN4RL1Q86UN2 441 aaPredicted RBP5.06□□□□□ -1.6
SRP54-207ENST00000555535 LILRA3Q8N6C8 439 aaPredicted RBP5.06□□□□□ -1.6
SRP54-207ENST00000555535 ERCC4Q92889 916 aaPredicted RBP5.06□□□□□ -1.6
SRP54-207ENST00000555535 FOXRED1Q96CU9 486 aaPredicted RBP5.06□□□□□ -1.6
SRP54-207ENST00000555535 IPO9Q96P70 1041 aaKnown RBP5.06□□□□□ -1.6
SRP54-207ENST00000555535 DKK2Q9UBU2 259 aa5.06□□□□□ -1.6
SRP54-207ENST00000555535 SLC12A8A0AV02 714 aa5.05□□□□□ -1.6
SRP54-207ENST00000555535 DNAJC6O75061 913 aa5.05□□□□□ -1.6
SRP54-207ENST00000555535 NCR1O76036 304 aa5.05□□□□□ -1.6
SRP54-207ENST00000555535 WNT3AP56704 352 aa5.05□□□□□ -1.6
SRP54-207ENST00000555535 SUMO1P63165 101 aaKnown RBP5.05□□□□□ -1.6
SRP54-207ENST00000555535 GABREP78334 506 aa5.05□□□□□ -1.6
SRP54-207ENST00000555535 TM4SF20Q53R12 229 aa5.05□□□□□ -1.6
SRP54-207ENST00000555535 ARMC6Q6NXE6 501 aa5.05□□□□□ -1.6
SRP54-207ENST00000555535 EPC1Q9H2F5 836 aa5.05□□□□□ -1.6
SRP54-207ENST00000555535 HDAC5Q9UQL6 1122 aa5.05□□□□□ -1.6
SRP54-207ENST00000555535 KCNAB3O43448 404 aa5.04□□□□□ -1.6
SRP54-207ENST00000555535 PROP1O75360 226 aa5.04□□□□□ -1.6
SRP54-207ENST00000555535 APOBEC3AP31941 199 aaPredicted RBP5.04□□□□□ -1.6
SRP54-207ENST00000555535 FNTBP49356 437 aa5.04□□□□□ -1.6
SRP54-207ENST00000555535 BCAR1P56945 870 aa5.04□□□□□ -1.6
SRP54-207ENST00000555535 MXRA7P84157 204 aa5.04□□□□□ -1.6
SRP54-207ENST00000555535 DOK3Q7L591 496 aa5.04□□□□□ -1.6
SRP54-207ENST00000555535 ZNF408Q9H9D4 720 aa5.04□□□□□ -1.6
SRP54-207ENST00000555535 CHST2Q9Y4C5 530 aa5.04□□□□□ -1.6
SRP54-207ENST00000555535 STC2O76061 302 aa5.03□□□□□ -1.6
SRP54-207ENST00000555535 PRLP01236 227 aa5.03□□□□□ -1.6
SRP54-207ENST00000555535 SPATA31D3P0C874 917 aa5.03□□□□□ -1.6
SRP54-207ENST00000555535 SLC6A3Q01959 620 aa5.03□□□□□ -1.6
SRP54-207ENST00000555535 SLFN12LQ6IEE8 588 aa5.03□□□□□ -1.6
SRP54-207ENST00000555535 CC2D1AQ6P1N0 951 aaPredicted RBP5.03□□□□□ -1.6
SRP54-207ENST00000555535 SPATA31D4Q6ZUB0 917 aa5.03□□□□□ -1.6
SRP54-207ENST00000555535 CISD2Q8N5K1 135 aaKnown RBP5.03□□□□□ -1.6
SRP54-207ENST00000555535 SPATA3Q8NHX4 192 aa5.03□□□□□ -1.6
SRP54-207ENST00000555535 ZNF384Q8TF68 577 aa5.03□□□□□ -1.6
SRP54-207ENST00000555535 RPGRQ92834 1020 aaKnown RBP5.03□□□□□ -1.6
SRP54-207ENST00000555535 CDC6Q99741 560 aa5.03□□□□□ -1.6
SRP54-207ENST00000555535 OSBPL6Q9BZF3 934 aa5.03□□□□□ -1.6
SRP54-207ENST00000555535 HAPLN2Q9GZV7 340 aa5.03□□□□□ -1.6
SRP54-207ENST00000555535 KIAA1586Q9HCI6 787 aa5.03□□□□□ -1.6
SRP54-207ENST00000555535 ALG13Q9NP73 1137 aaKnown RBP5.03□□□□□ -1.6
SRP54-207ENST00000555535 ST7Q9NRC1 585 aa5.03□□□□□ -1.6
SRP54-207ENST00000555535 SEMA4GQ9NTN9 838 aa5.03□□□□□ -1.6
SRP54-207ENST00000555535 ARHGEF17Q96PE2 2063 aaPredicted RBP5.03□□□□□ -1.6
SRP54-207ENST00000555535 FGRP09769 529 aa5.02□□□□□ -1.61
SRP54-207ENST00000555535 DDX6P26196 483 aaKnown RBP eCLIP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms