RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 TMEM161BQ8NDZ6 487 aa14□□□□□ -0.17
SYNE2-219ENST00000555323 ZNF668Q96K58 619 aaPredicted RBP14□□□□□ -0.17
SYNE2-219ENST00000555323 STRA6Q9BX79 667 aa14□□□□□ -0.17
SYNE2-219ENST00000555323 MINDY3Q9H8M7 445 aa14□□□□□ -0.17
SYNE2-219ENST00000555323 AGO3Q9H9G7 860 aaKnown RBP14□□□□□ -0.17
SYNE2-219ENST00000555323 KMT5AQ9NQR1 393 aa14□□□□□ -0.17
SYNE2-219ENST00000555323 ZMYND8Q9ULU4 1186 aaPredicted RBP14□□□□□ -0.17
SYNE2-219ENST00000555323 GINS2Q9Y248 185 aa14□□□□□ -0.17
SYNE2-219ENST00000555323 NOC2LQ9Y3T9 749 aaKnown RBP14□□□□□ -0.17
SYNE2-219ENST00000555323 PHLPP2Q6ZVD8 1323 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 ADGRA3Q8IWK6 1321 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 LRRIQ4A6NIV6 560 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 CCDC169A6NNP5 214 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 H0YCG3 227 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 RPS6KA5O75582 802 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 MBD3O95983 291 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 PRR29P0C7W0 189 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 GHRP10912 638 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 IDEP14735 1019 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 PTMSP20962 102 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 ABCD1P33897 745 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 GTF2BQ00403 316 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 MBTD1Q05BQ5 628 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 COASYQ13057 564 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 PSMD2Q13200 908 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 PPIGQ13427 754 aaKnown RBP eCLIP13.99□□□□□ -0.17
SYNE2-219ENST00000555323 KCNB1Q14721 858 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 HERC4Q5GLZ8 1057 aaPredicted RBP13.99□□□□□ -0.17
SYNE2-219ENST00000555323 C16orf59Q7L2K0 433 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 FAM228AQ86W67 206 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 FAM178BQ8IXR5 827 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 DEPTORQ8TB45 409 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 APBB2Q92870 758 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 PPP1R16BQ96T49 567 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 CCDC113Q9H0I3 377 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 ERVK-5Q9HDB9 667 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 IL23AQ9NPF7 189 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 PADI3Q9ULW8 664 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 ST3GAL5Q9UNP4 418 aa13.99□□□□□ -0.17
SYNE2-219ENST00000555323 K7ERI5 159 aa13.98□□□□□ -0.17
SYNE2-219ENST00000555323 PPP1R37O75864 691 aa13.98□□□□□ -0.17
SYNE2-219ENST00000555323 RHOBTB3O94955 611 aa13.98□□□□□ -0.17
SYNE2-219ENST00000555323 RPN1P04843 607 aaKnown RBP13.98□□□□□ -0.17
SYNE2-219ENST00000555323 SFPQP23246 707 aaKnown RBP eCLIP13.98□□□□□ -0.17
SYNE2-219ENST00000555323 FPGSQ05932 587 aa13.98□□□□□ -0.17
SYNE2-219ENST00000555323 PNOCQ13519 176 aa13.98□□□□□ -0.17
SYNE2-219ENST00000555323 AMHR2Q16671 573 aa13.98□□□□□ -0.17
SYNE2-219ENST00000555323 KMT5BQ4FZB7 885 aa13.98□□□□□ -0.17
SYNE2-219ENST00000555323 TAS1R3Q7RTX0 852 aa13.98□□□□□ -0.17
SYNE2-219ENST00000555323 HAUS6Q7Z4H7 955 aa13.98□□□□□ -0.17
SYNE2-219ENST00000555323 SFR1Q86XK3 245 aa13.98□□□□□ -0.17
SYNE2-219ENST00000555323 ZBTB8OSQ8IWT0 167 aa13.98□□□□□ -0.17
SYNE2-219ENST00000555323 DBF4BQ8NFT6 615 aa13.98□□□□□ -0.17
SYNE2-219ENST00000555323 PRIMPOLQ96LW4 560 aa13.98□□□□□ -0.17
SYNE2-219ENST00000555323 SCLT1Q96NL6 688 aa13.98□□□□□ -0.17
SYNE2-219ENST00000555323 GSDMAQ96QA5 445 aa13.98□□□□□ -0.17
SYNE2-219ENST00000555323 LBHD1Q9BQE6 289 aaPredicted RBP13.98□□□□□ -0.17
SYNE2-219ENST00000555323 KIFC3Q9BVG8 833 aa13.98□□□□□ -0.17
SYNE2-219ENST00000555323 IFIH1Q9BYX4 1025 aaKnown RBP13.98□□□□□ -0.17
SYNE2-219ENST00000555323 ZHX3Q9H4I2 956 aa13.98□□□□□ -0.17
SYNE2-219ENST00000555323 CHST12Q9NRB3 414 aa13.98□□□□□ -0.17
SYNE2-219ENST00000555323 PRMT7Q9NVM4 692 aaPredicted RBP13.98□□□□□ -0.17
SYNE2-219ENST00000555323 PCDHA5Q9Y5H7 936 aa13.98□□□□□ -0.17
SYNE2-219ENST00000555323 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.97□□□□□ -0.17
SYNE2-219ENST00000555323 INO80B-WBP1J3KQ70 363 aa13.97□□□□□ -0.17
SYNE2-219ENST00000555323 ACKR2O00590 384 aa13.97□□□□□ -0.17
SYNE2-219ENST00000555323 SLC16A4O15374 487 aa13.97□□□□□ -0.17
SYNE2-219ENST00000555323 CSDE1O75534 798 aaKnown RBP13.97□□□□□ -0.17
SYNE2-219ENST00000555323 AXLP30530 894 aa13.97□□□□□ -0.17
SYNE2-219ENST00000555323 HOXA11P31270 313 aaPredicted RBP13.97□□□□□ -0.17
SYNE2-219ENST00000555323 CD52P31358 61 aa13.97□□□□□ -0.17
SYNE2-219ENST00000555323 MAPK6Q16659 721 aa13.97□□□□□ -0.17
SYNE2-219ENST00000555323 CNKSR3Q6P9H4 555 aa13.97□□□□□ -0.17
SYNE2-219ENST00000555323 SEPT8Q92599 483 aa13.97□□□□□ -0.17
SYNE2-219ENST00000555323 GDF15Q99988 308 aa13.97□□□□□ -0.17
SYNE2-219ENST00000555323 TRAIPQ9BWF2 469 aa13.97□□□□□ -0.17
SYNE2-219ENST00000555323 FTHL17Q9BXU8 183 aa13.97□□□□□ -0.17
SYNE2-219ENST00000555323 CLSTN2Q9H4D0 955 aa13.97□□□□□ -0.17
SYNE2-219ENST00000555323 MRPL44Q9H9J2 332 aaKnown RBP13.97□□□□□ -0.17
SYNE2-219ENST00000555323 A0A1B0GUA9 196 aa13.96□□□□□ -0.17
SYNE2-219ENST00000555323 ABHD14A-ACY1A0A1B0GW23 586 aa13.96□□□□□ -0.17
SYNE2-219ENST00000555323 DENND3A2RUS2 1198 aa13.96□□□□□ -0.17
SYNE2-219ENST00000555323 H0YGN5 161 aa13.96□□□□□ -0.17
SYNE2-219ENST00000555323 SMC2O95347 1197 aa13.96□□□□□ -0.17
SYNE2-219ENST00000555323 NMT1P30419 496 aaKnown RBP13.96□□□□□ -0.17
SYNE2-219ENST00000555323 EPHB4P54760 987 aa13.96□□□□□ -0.17
SYNE2-219ENST00000555323 NFX1Q12986 1120 aaKnown RBP13.96□□□□□ -0.17
SYNE2-219ENST00000555323 PAK2Q13177 524 aa13.96□□□□□ -0.17
SYNE2-219ENST00000555323 MAPK8IP2Q13387 824 aaPredicted RBP13.96□□□□□ -0.17
SYNE2-219ENST00000555323 ALCAMQ13740 583 aa13.96□□□□□ -0.17
SYNE2-219ENST00000555323 DSC3Q14574 896 aa13.96□□□□□ -0.17
SYNE2-219ENST00000555323 FAM26FQ5R3K3 315 aa13.96□□□□□ -0.17
SYNE2-219ENST00000555323 EPM2AIP1Q7L775 607 aaPredicted RBP13.96□□□□□ -0.17
SYNE2-219ENST00000555323 DEFB128Q7Z7B8 93 aa13.96□□□□□ -0.17
SYNE2-219ENST00000555323 RTN4RL1Q86UN2 441 aaPredicted RBP13.96□□□□□ -0.17
SYNE2-219ENST00000555323 ZNF507Q8TCN5 953 aa13.96□□□□□ -0.17
SYNE2-219ENST00000555323 CCDC47Q96A33 483 aaKnown RBP13.96□□□□□ -0.17
SYNE2-219ENST00000555323 HVCN1Q96D96 273 aa13.96□□□□□ -0.17
SYNE2-219ENST00000555323 TMX1Q9H3N1 280 aa13.96□□□□□ -0.17
SYNE2-219ENST00000555323 AGPAT5Q9NUQ2 364 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms