RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 ELAVL1Q15717 326 aaKnown RBP7.34□□□□□ -1.23
VRK1-203ENST00000555067 MFSD5Q6N075 450 aa7.34□□□□□ -1.23
VRK1-203ENST00000555067 ESRP1Q6NXG1 681 aaKnown RBP7.34□□□□□ -1.23
VRK1-203ENST00000555067 KANSL1Q7Z3B3 1105 aa7.34□□□□□ -1.23
VRK1-203ENST00000555067 ZSWIM4Q9H7M6 989 aa7.34□□□□□ -1.23
VRK1-203ENST00000555067 DNAI1Q9UI46 699 aa7.34□□□□□ -1.23
VRK1-203ENST00000555067 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.34□□□□□ -1.23
VRK1-203ENST00000555067 ZKSCAN5Q9Y2L8 839 aa7.34□□□□□ -1.23
VRK1-203ENST00000555067 ASMTLO95671 621 aa7.33□□□□□ -1.24
VRK1-203ENST00000555067 ADRA1BP35368 520 aa7.33□□□□□ -1.24
VRK1-203ENST00000555067 MAN2A2P49641 1150 aa7.33□□□□□ -1.24
VRK1-203ENST00000555067 ADCY2Q08462 1091 aa7.33□□□□□ -1.24
VRK1-203ENST00000555067 CNGB1Q14028 1251 aaPredicted RBP7.33□□□□□ -1.24
VRK1-203ENST00000555067 CREB3L3Q68CJ9 461 aa7.33□□□□□ -1.24
VRK1-203ENST00000555067 DHX37Q8IY37 1157 aaKnown RBP7.33□□□□□ -1.24
VRK1-203ENST00000555067 PIF1Q9H611 641 aa7.33□□□□□ -1.24
VRK1-203ENST00000555067 REXO2Q9Y3B8 237 aaKnown RBP7.33□□□□□ -1.24
VRK1-203ENST00000555067 A0A0A6YYJ9 748 aa7.32□□□□□ -1.24
VRK1-203ENST00000555067 UBE2QL1A1L167 161 aa7.32□□□□□ -1.24
VRK1-203ENST00000555067 MTSS1O43312 755 aa7.32□□□□□ -1.24
VRK1-203ENST00000555067 IL12RB1P42701 662 aa7.32□□□□□ -1.24
VRK1-203ENST00000555067 SMAD3P84022 425 aaKnown RBP7.32□□□□□ -1.24
VRK1-203ENST00000555067 MAN2A1Q16706 1144 aa7.32□□□□□ -1.24
VRK1-203ENST00000555067 KIAA1841Q6NSI8 718 aa7.32□□□□□ -1.24
VRK1-203ENST00000555067 Q6ZRM9 215 aa7.32□□□□□ -1.24
VRK1-203ENST00000555067 KIF18BQ86Y91 864 aa7.32□□□□□ -1.24
VRK1-203ENST00000555067 GSPT2Q8IYD1 628 aaKnown RBP7.32□□□□□ -1.24
VRK1-203ENST00000555067 TTPALQ9BTX7 342 aa7.32□□□□□ -1.24
VRK1-203ENST00000555067 OSBPL6Q9BZF3 934 aa7.32□□□□□ -1.24
VRK1-203ENST00000555067 MTG2Q9H4K7 406 aa7.32□□□□□ -1.24
VRK1-203ENST00000555067 KANSL2Q9H9L4 492 aa7.32□□□□□ -1.24
VRK1-203ENST00000555067 MARCH6O60337 910 aa7.31□□□□□ -1.24
VRK1-203ENST00000555067 GAS7O60861 476 aa7.31□□□□□ -1.24
VRK1-203ENST00000555067 IPO13O94829 963 aaKnown RBP7.31□□□□□ -1.24
VRK1-203ENST00000555067 PRPF6O94906 941 aaKnown RBP7.31□□□□□ -1.24
VRK1-203ENST00000555067 SCNN1GP51170 649 aa7.31□□□□□ -1.24
VRK1-203ENST00000555067 TCEA2Q15560 299 aa7.31□□□□□ -1.24
VRK1-203ENST00000555067 FKBP15Q5T1M5 1219 aa7.31□□□□□ -1.24
VRK1-203ENST00000555067 EGFLAMQ63HQ2 1017 aa7.31□□□□□ -1.24
VRK1-203ENST00000555067 SDE2Q6IQ49 451 aa7.31□□□□□ -1.24
VRK1-203ENST00000555067 RPUSD2Q8IZ73 545 aaKnown RBP7.31□□□□□ -1.24
VRK1-203ENST00000555067 TOMM22Q9NS69 142 aa7.31□□□□□ -1.24
VRK1-203ENST00000555067 OXSMQ9NWU1 459 aa7.31□□□□□ -1.24
VRK1-203ENST00000555067 OPHN1O60890 802 aa7.3□□□□□ -1.24
VRK1-203ENST00000555067 FSBPO95073 299 aa7.3□□□□□ -1.24
VRK1-203ENST00000555067 LMO1P25800 156 aa7.3□□□□□ -1.24
VRK1-203ENST00000555067 CD40P25942 277 aa7.3□□□□□ -1.24
VRK1-203ENST00000555067 KIR2DL3P43628 341 aa7.3□□□□□ -1.24
VRK1-203ENST00000555067 CCDC142Q17RM4 750 aa7.3□□□□□ -1.24
VRK1-203ENST00000555067 EFHBQ8N7U6 833 aa7.3□□□□□ -1.24
VRK1-203ENST00000555067 ARL8AQ96BM9 186 aa7.3□□□□□ -1.24
VRK1-203ENST00000555067 NAF1Q96HR8 494 aaKnown RBP7.3□□□□□ -1.24
VRK1-203ENST00000555067 HIST1H2AHQ96KK5 128 aa7.3□□□□□ -1.24
VRK1-203ENST00000555067 HIST1H2AJQ99878 128 aa7.3□□□□□ -1.24
VRK1-203ENST00000555067 MYL10Q9BUA6 226 aa7.3□□□□□ -1.24
VRK1-203ENST00000555067 GPR87Q9BY21 358 aa7.3□□□□□ -1.24
VRK1-203ENST00000555067 GPRC5BQ9NZH0 403 aa7.3□□□□□ -1.24
VRK1-203ENST00000555067 TBX22Q9Y458 520 aa7.3□□□□□ -1.24
VRK1-203ENST00000555067 ARID4BQ4LE39 1312 aaPredicted RBP7.29□□□□□ -1.24
VRK1-203ENST00000555067 GOLGA6L6A8MZA4 724 aa7.29□□□□□ -1.24
VRK1-203ENST00000555067 MFAP3LO75121 409 aa7.29□□□□□ -1.24
VRK1-203ENST00000555067 APOL3O95236 402 aa7.29□□□□□ -1.24
VRK1-203ENST00000555067 HNRNPLP14866 589 aaKnown RBP eCLIP7.29□□□□□ -1.24
VRK1-203ENST00000555067 ATP2A2P16615 1042 aaKnown RBP7.29□□□□□ -1.24
VRK1-203ENST00000555067 BMP5P22003 454 aa7.29□□□□□ -1.24
VRK1-203ENST00000555067 SLC25A3Q00325 362 aa7.29□□□□□ -1.24
VRK1-203ENST00000555067 SPIDRQ14159 915 aa7.29□□□□□ -1.24
VRK1-203ENST00000555067 HTR3DQ70Z44 454 aa7.29□□□□□ -1.24
VRK1-203ENST00000555067 PASD1Q8IV76 773 aa7.29□□□□□ -1.24
VRK1-203ENST00000555067 CMTM4Q8IZR5 234 aa7.29□□□□□ -1.24
VRK1-203ENST00000555067 RTF1Q92541 710 aaKnown RBP7.29□□□□□ -1.24
VRK1-203ENST00000555067 UIMC1Q96RL1 719 aa7.29□□□□□ -1.24
VRK1-203ENST00000555067 NOL10Q9BSC4 688 aaKnown RBP7.29□□□□□ -1.24
VRK1-203ENST00000555067 POFUT1Q9H488 388 aa7.29□□□□□ -1.24
VRK1-203ENST00000555067 ZMAT4Q9H898 229 aa7.29□□□□□ -1.24
VRK1-203ENST00000555067 IFT57Q9NWB7 429 aa7.29□□□□□ -1.24
VRK1-203ENST00000555067 USP36Q9P275 1121 aaKnown RBP7.29□□□□□ -1.24
VRK1-203ENST00000555067 TMEM191CA6NGB0 347 aa7.28□□□□□ -1.24
VRK1-203ENST00000555067 F2P00734 622 aa7.28□□□□□ -1.24
VRK1-203ENST00000555067 POU3F2P20265 443 aaPredicted RBP7.28□□□□□ -1.24
VRK1-203ENST00000555067 ATXN1P54253 815 aaKnown RBP7.28□□□□□ -1.24
VRK1-203ENST00000555067 NPEPPSP55786 919 aa7.28□□□□□ -1.24
VRK1-203ENST00000555067 TOB2Q14106 344 aaPredicted RBP7.28□□□□□ -1.24
VRK1-203ENST00000555067 LRRC32Q14392 662 aa7.28□□□□□ -1.24
VRK1-203ENST00000555067 LAIR1Q6GTX8 287 aa7.28□□□□□ -1.24
VRK1-203ENST00000555067 NOL8Q76FK4 1167 aaKnown RBP7.28□□□□□ -1.24
VRK1-203ENST00000555067 HOMER1Q86YM7 354 aa7.28□□□□□ -1.24
VRK1-203ENST00000555067 GPATCH3Q96I76 525 aa7.28□□□□□ -1.24
VRK1-203ENST00000555067 ZNF512Q96ME7 567 aaPredicted RBP7.28□□□□□ -1.24
VRK1-203ENST00000555067 NRP1O14786 923 aa7.27□□□□□ -1.25
VRK1-203ENST00000555067 KPNA6O60684 536 aa7.27□□□□□ -1.25
VRK1-203ENST00000555067 RAB11FIP3O75154 756 aa7.27□□□□□ -1.25
VRK1-203ENST00000555067 PROZP22891 400 aa7.27□□□□□ -1.25
VRK1-203ENST00000555067 PTGS2P35354 604 aa7.27□□□□□ -1.25
VRK1-203ENST00000555067 RABGGTBP53611 331 aa7.27□□□□□ -1.25
VRK1-203ENST00000555067 UNC5BQ8IZJ1 945 aa7.27□□□□□ -1.25
VRK1-203ENST00000555067 MDGA1Q8NFP4 955 aa7.27□□□□□ -1.25
VRK1-203ENST00000555067 H2AFY2Q9P0M6 372 aaPredicted RBP7.27□□□□□ -1.25
VRK1-203ENST00000555067 NCDNQ9UBB6 729 aa7.27□□□□□ -1.25
VRK1-203ENST00000555067 KLRG2A4D1S0 409 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms