RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 E9PMD0 336 aa11.73□□□□□ -0.53
TMEM260-206ENST00000555046 H0YCG3 227 aa11.73□□□□□ -0.53
TMEM260-206ENST00000555046 ENPP3O14638 875 aa11.73□□□□□ -0.53
TMEM260-206ENST00000555046 GUCY2CP25092 1073 aa11.73□□□□□ -0.53
TMEM260-206ENST00000555046 AXLP30530 894 aa11.73□□□□□ -0.53
TMEM260-206ENST00000555046 CD52P31358 61 aa11.73□□□□□ -0.53
TMEM260-206ENST00000555046 ABCD1P33897 745 aa11.73□□□□□ -0.53
TMEM260-206ENST00000555046 EFNA5P52803 228 aa11.73□□□□□ -0.53
TMEM260-206ENST00000555046 SMTNP53814 917 aa11.73□□□□□ -0.53
TMEM260-206ENST00000555046 GRB10Q13322 594 aa11.73□□□□□ -0.53
TMEM260-206ENST00000555046 ADGRE1Q14246 886 aa11.73□□□□□ -0.53
TMEM260-206ENST00000555046 RAB30Q15771 203 aa11.73□□□□□ -0.53
TMEM260-206ENST00000555046 CCDC85BQ15834 202 aaPredicted RBP11.73□□□□□ -0.53
TMEM260-206ENST00000555046 TMEM119Q4V9L6 283 aa11.73□□□□□ -0.53
TMEM260-206ENST00000555046 RINT1Q6NUQ1 792 aa11.73□□□□□ -0.53
TMEM260-206ENST00000555046 SLC24A5Q71RS6 500 aa11.73□□□□□ -0.53
TMEM260-206ENST00000555046 SV2BQ7L1I2 683 aa11.73□□□□□ -0.53
TMEM260-206ENST00000555046 ZBTB8OSQ8IWT0 167 aa11.73□□□□□ -0.53
TMEM260-206ENST00000555046 IQUBQ8NA54 791 aa11.73□□□□□ -0.53
TMEM260-206ENST00000555046 EPSTI1Q96J88 318 aa11.73□□□□□ -0.53
TMEM260-206ENST00000555046 CLIC6Q96NY7 704 aa11.73□□□□□ -0.53
TMEM260-206ENST00000555046 PLIN2Q99541 437 aa11.73□□□□□ -0.53
TMEM260-206ENST00000555046 FDXACB1Q9BRP7 624 aaPredicted RBP11.73□□□□□ -0.53
TMEM260-206ENST00000555046 CUEDC2Q9H467 287 aa11.73□□□□□ -0.53
TMEM260-206ENST00000555046 AGO3Q9H9G7 860 aaKnown RBP11.73□□□□□ -0.53
TMEM260-206ENST00000555046 CDHR5Q9HBB8 845 aa11.73□□□□□ -0.53
TMEM260-206ENST00000555046 CHMP5Q9NZZ3 219 aa11.73□□□□□ -0.53
TMEM260-206ENST00000555046 NOC2LQ9Y3T9 749 aaKnown RBP11.73□□□□□ -0.53
TMEM260-206ENST00000555046 RBM19Q9Y4C8 960 aaKnown RBP11.73□□□□□ -0.53
TMEM260-206ENST00000555046 ZFHX2Q9C0A1 2572 aaPredicted RBP11.73□□□□□ -0.53
TMEM260-206ENST00000555046 ATRXP46100 2492 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 PTPRZ1P23471 2315 aaPredicted RBP11.72□□□□□ -0.53
TMEM260-206ENST00000555046 GOLGA6L4A6NEF3 574 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 ERLIN2O94905 339 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 PLCG1P19174 1290 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 NAMPTP43490 491 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 SLC12A3P55017 1021 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 PTENP60484 403 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 DMP1Q13316 513 aaPredicted RBP11.72□□□□□ -0.53
TMEM260-206ENST00000555046 DRP2Q13474 957 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 KARSQ15046 597 aaKnown RBP11.72□□□□□ -0.53
TMEM260-206ENST00000555046 ADALQ6DHV7 355 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 C1orf186Q6ZWK4 172 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 MAEAQ7L5Y9 396 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 CATSPER4Q7RTX7 472 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 IFNLR1Q8IU57 520 aaPredicted RBP11.72□□□□□ -0.53
TMEM260-206ENST00000555046 DEPTORQ8TB45 409 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 RSPH1Q8WYR4 309 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 LARP4BQ92615 738 aaKnown RBP11.72□□□□□ -0.53
TMEM260-206ENST00000555046 RAD54LQ92698 747 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 TOP1MTQ969P6 601 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 VWCEQ96DN2 955 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 CCDC34Q96HJ3 373 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 FBXL18Q96ME1 805 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 PNMA5Q96PV4 448 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 PPP1R16BQ96T49 567 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 RAD9AQ99638 391 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 POLR3FQ9H1D9 316 aaPredicted RBP11.72□□□□□ -0.53
TMEM260-206ENST00000555046 TSPYL2Q9H2G4 693 aaPredicted RBP11.72□□□□□ -0.53
TMEM260-206ENST00000555046 ERVK-5Q9HDB9 667 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 XPNPEP1Q9NQW7 623 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 LARSQ9P2J5 1176 aaKnown RBP11.72□□□□□ -0.53
TMEM260-206ENST00000555046 PCDHA7Q9UN72 937 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 INSL6Q9Y581 213 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 PCDHB7Q9Y5E2 793 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 PCDHA11Q9Y5I1 949 aa11.72□□□□□ -0.53
TMEM260-206ENST00000555046 CFAP47Q6ZTR5 3102 aa11.71□□□□□ -0.53
TMEM260-206ENST00000555046 TRIOO75962 3097 aa11.71□□□□□ -0.53
TMEM260-206ENST00000555046 PRRC2BQ5JSZ5 2229 aaKnown RBP11.71□□□□□ -0.53
TMEM260-206ENST00000555046 PRR33A8MZF0 331 aa11.71□□□□□ -0.53
TMEM260-206ENST00000555046 INO80B-WBP1J3KQ70 363 aa11.71□□□□□ -0.53
TMEM260-206ENST00000555046 KRT18P05783 430 aaKnown RBP11.71□□□□□ -0.53
TMEM260-206ENST00000555046 GLRA2P23416 452 aa11.71□□□□□ -0.53
TMEM260-206ENST00000555046 CMA1P23946 247 aa11.71□□□□□ -0.53
TMEM260-206ENST00000555046 STAT6P42226 847 aa11.71□□□□□ -0.53
TMEM260-206ENST00000555046 WDR5P61964 334 aaKnown RBP11.71□□□□□ -0.53
TMEM260-206ENST00000555046 GRIN1Q05586 938 aa11.71□□□□□ -0.53
TMEM260-206ENST00000555046 SPECC1Q5M775 1068 aa11.71□□□□□ -0.53
TMEM260-206ENST00000555046 APBB1IPQ7Z5R6 666 aaPredicted RBP11.71□□□□□ -0.53
TMEM260-206ENST00000555046 HERC6Q8IVU3 1022 aa11.71□□□□□ -0.53
TMEM260-206ENST00000555046 MYOCDQ8IZQ8 938 aa11.71□□□□□ -0.53
TMEM260-206ENST00000555046 LEO1Q8WVC0 666 aaPredicted RBP11.71□□□□□ -0.53
TMEM260-206ENST00000555046 PHOX2BQ99453 314 aa11.71□□□□□ -0.53
TMEM260-206ENST00000555046 ADAM2Q99965 735 aa11.71□□□□□ -0.53
TMEM260-206ENST00000555046 NTPCRQ9BSD7 190 aaKnown RBP11.71□□□□□ -0.53
TMEM260-206ENST00000555046 PRDM12Q9H4Q4 367 aa11.71□□□□□ -0.53
TMEM260-206ENST00000555046 MAGEF1Q9HAY2 307 aa11.71□□□□□ -0.53
TMEM260-206ENST00000555046 IFT122Q9HBG6 1241 aa11.71□□□□□ -0.53
TMEM260-206ENST00000555046 RGS18Q9NS28 235 aa11.71□□□□□ -0.53
TMEM260-206ENST00000555046 LRFN2Q9ULH4 789 aa11.71□□□□□ -0.53
TMEM260-206ENST00000555046 ODF2LQ9ULJ1 636 aa11.71□□□□□ -0.53
TMEM260-206ENST00000555046 GBF1Q92538 1859 aa11.71□□□□□ -0.53
TMEM260-206ENST00000555046 KAT6AQ92794 2004 aa11.7□□□□□ -0.54
TMEM260-206ENST00000555046 CACNA1HO95180 2353 aa11.7□□□□□ -0.54
TMEM260-206ENST00000555046 CHD6Q8TD26 2715 aa11.7□□□□□ -0.54
TMEM260-206ENST00000555046 LRRIQ4A6NIV6 560 aa11.7□□□□□ -0.54
TMEM260-206ENST00000555046 CCDC169A6NNP5 214 aa11.7□□□□□ -0.54
TMEM260-206ENST00000555046 K7ERI5 159 aa11.7□□□□□ -0.54
TMEM260-206ENST00000555046 HOXA2O43364 376 aa11.7□□□□□ -0.54
TMEM260-206ENST00000555046 TLL1O43897 1013 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms