RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	NEK4	P51957	841 aa		7.09	□□□□□ -1.27
PSMC6-208	ENST00000554956	KIF11	P52732	1056 aa		7.09	□□□□□ -1.27
PSMC6-208	ENST00000554956	R3HDM1	Q15032	1099 aa	Known RBP	7.09	□□□□□ -1.27
PSMC6-208	ENST00000554956	ARHGAP44	Q17R89	818 aa		7.09	□□□□□ -1.27
PSMC6-208	ENST00000554956	CREB3L3	Q68CJ9	461 aa		7.09	□□□□□ -1.27
PSMC6-208	ENST00000554956	HIPK4	Q8NE63	616 aa		7.09	□□□□□ -1.27
PSMC6-208	ENST00000554956	TEPSIN	Q96N21	525 aa		7.09	□□□□□ -1.27
PSMC6-208	ENST00000554956	TARS2	Q9BW92	718 aa	Known RBP	7.09	□□□□□ -1.27
PSMC6-208	ENST00000554956	MTFR1L	Q9H019	292 aa		7.09	□□□□□ -1.27
PSMC6-208	ENST00000554956	B4GALT6	Q9UBX8	382 aa		7.09	□□□□□ -1.27
PSMC6-208	ENST00000554956	NRAP	Q86VF7	1730 aa		7.09	□□□□□ -1.27
PSMC6-208	ENST00000554956	EIF3A	Q14152	1382 aa	Known RBP	7.08	□□□□□ -1.28
PSMC6-208	ENST00000554956	USP19	O94966	1318 aa		7.08	□□□□□ -1.28
PSMC6-208	ENST00000554956	C9orf118	A6NHY6	69 aa		7.08	□□□□□ -1.28
PSMC6-208	ENST00000554956	ZNF891	A8MT65	544 aa	Predicted RBP	7.08	□□□□□ -1.28
PSMC6-208	ENST00000554956		H0Y858	1186 aa		7.08	□□□□□ -1.28
PSMC6-208	ENST00000554956	B4GALT3	O60512	393 aa		7.08	□□□□□ -1.28
PSMC6-208	ENST00000554956	GC	P02774	474 aa		7.08	□□□□□ -1.28
PSMC6-208	ENST00000554956	SDHA	P31040	664 aa		7.08	□□□□□ -1.28
PSMC6-208	ENST00000554956	ADCY8	P40145	1251 aa		7.08	□□□□□ -1.28
PSMC6-208	ENST00000554956	PCBP1	Q15365	356 aa	Known RBP eCLIP	7.08	□□□□□ -1.28
PSMC6-208	ENST00000554956	UBXN11	Q5T124	520 aa		7.08	□□□□□ -1.28
PSMC6-208	ENST00000554956	GPR155	Q7Z3F1	870 aa		7.08	□□□□□ -1.28
PSMC6-208	ENST00000554956	NXPE1	Q8N323	547 aa		7.08	□□□□□ -1.28
PSMC6-208	ENST00000554956	MFSD3	Q96ES6	412 aa		7.08	□□□□□ -1.28
PSMC6-208	ENST00000554956	GALNT8	Q9NY28	637 aa		7.08	□□□□□ -1.28
PSMC6-208	ENST00000554956	H2AFY2	Q9P0M6	372 aa	Predicted RBP	7.08	□□□□□ -1.28
PSMC6-208	ENST00000554956	PLAA	Q9Y263	795 aa		7.08	□□□□□ -1.28
PSMC6-208	ENST00000554956	INVS	Q9Y283	1065 aa		7.08	□□□□□ -1.28
PSMC6-208	ENST00000554956	NWD2	Q9ULI1	1742 aa		7.07	□□□□□ -1.28
PSMC6-208	ENST00000554956	CAMTA1	Q9Y6Y1	1673 aa		7.07	□□□□□ -1.28
PSMC6-208	ENST00000554956	CHGB	P05060	677 aa		7.07	□□□□□ -1.28
PSMC6-208	ENST00000554956	NFATC3	Q12968	1075 aa		7.07	□□□□□ -1.28
PSMC6-208	ENST00000554956	SEPT7	Q16181	437 aa	Known RBP	7.07	□□□□□ -1.28
PSMC6-208	ENST00000554956	PLEKHG4	Q58EX7	1191 aa		7.07	□□□□□ -1.28
PSMC6-208	ENST00000554956	SDE2	Q6IQ49	451 aa		7.07	□□□□□ -1.28
PSMC6-208	ENST00000554956	CC2D1A	Q6P1N0	951 aa	Predicted RBP	7.07	□□□□□ -1.28
PSMC6-208	ENST00000554956		Q6ZUG5	572 aa		7.07	□□□□□ -1.28
PSMC6-208	ENST00000554956	PTF1A	Q7RTS3	328 aa		7.07	□□□□□ -1.28
PSMC6-208	ENST00000554956	KIAA1958	Q8N8K9	716 aa		7.07	□□□□□ -1.28
PSMC6-208	ENST00000554956	SIN3A	Q96ST3	1273 aa		7.07	□□□□□ -1.28
PSMC6-208	ENST00000554956	PCIF1	Q9H4Z3	704 aa		7.07	□□□□□ -1.28
PSMC6-208	ENST00000554956	PTPN22	Q9Y2R2	807 aa		7.07	□□□□□ -1.28
PSMC6-208	ENST00000554956	TMA7	Q9Y2S6	64 aa	Known RBP	7.07	□□□□□ -1.28
PSMC6-208	ENST00000554956	ZDHHC9	Q9Y397	364 aa		7.07	□□□□□ -1.28
PSMC6-208	ENST00000554956	SSH2	Q76I76	1423 aa		7.07	□□□□□ -1.28
PSMC6-208	ENST00000554956	THSD7A	Q9UPZ6	1657 aa		7.06	□□□□□ -1.28
PSMC6-208	ENST00000554956	COL14A1	Q05707	1796 aa	Known RBP	7.06	□□□□□ -1.28
PSMC6-208	ENST00000554956	GOLGA6L22	H0YM25	854 aa		7.06	□□□□□ -1.28
PSMC6-208	ENST00000554956		H7C1D1	291 aa		7.06	□□□□□ -1.28
PSMC6-208	ENST00000554956	ATP2A2	P16615	1042 aa	Known RBP	7.06	□□□□□ -1.28
PSMC6-208	ENST00000554956	SLC9A1	P19634	815 aa		7.06	□□□□□ -1.28
PSMC6-208	ENST00000554956	POU3F2	P20265	443 aa	Predicted RBP	7.06	□□□□□ -1.28
PSMC6-208	ENST00000554956	PTX3	P26022	381 aa	Predicted RBP	7.06	□□□□□ -1.28
PSMC6-208	ENST00000554956	ECE1	P42892	770 aa		7.06	□□□□□ -1.28
PSMC6-208	ENST00000554956	EVA1C	P58658	441 aa		7.06	□□□□□ -1.28
PSMC6-208	ENST00000554956	KIAA2012	Q0VF49	1180 aa		7.06	□□□□□ -1.28
PSMC6-208	ENST00000554956	WDR72	Q3MJ13	1102 aa		7.06	□□□□□ -1.28
PSMC6-208	ENST00000554956	RTN4RL1	Q86UN2	441 aa	Predicted RBP	7.06	□□□□□ -1.28
PSMC6-208	ENST00000554956	FAM124A	Q86V42	546 aa		7.06	□□□□□ -1.28
PSMC6-208	ENST00000554956	FAM177A1	Q8N128	213 aa	Predicted RBP	7.06	□□□□□ -1.28
PSMC6-208	ENST00000554956	KLHL36	Q8N4N3	616 aa		7.06	□□□□□ -1.28
PSMC6-208	ENST00000554956	RELT	Q969Z4	430 aa		7.06	□□□□□ -1.28
PSMC6-208	ENST00000554956	FOXRED1	Q96CU9	486 aa	Predicted RBP	7.06	□□□□□ -1.28
PSMC6-208	ENST00000554956	OXSM	Q9NWU1	459 aa		7.06	□□□□□ -1.28
PSMC6-208	ENST00000554956	ASB1	Q9Y576	335 aa		7.06	□□□□□ -1.28
PSMC6-208	ENST00000554956	DISP2	A7MBM2	1401 aa		7.06	□□□□□ -1.28
PSMC6-208	ENST00000554956	CRYBG1	Q9Y4K1	1723 aa		7.06	□□□□□ -1.28
PSMC6-208	ENST00000554956	CPD	O75976	1380 aa		7.06	□□□□□ -1.28
PSMC6-208	ENST00000554956	CENPJ	Q9HC77	1338 aa	Predicted RBP	7.05	□□□□□ -1.28
PSMC6-208	ENST00000554956	ARHGEF28	Q8N1W1	1705 aa	Known RBP	7.05	□□□□□ -1.28
PSMC6-208	ENST00000554956	PPIP5K1	Q6PFW1	1433 aa		7.05	□□□□□ -1.28
PSMC6-208	ENST00000554956	CSF2RB	P32927	897 aa		7.05	□□□□□ -1.28
PSMC6-208	ENST00000554956	GYS2	P54840	703 aa		7.05	□□□□□ -1.28
PSMC6-208	ENST00000554956	ZFYVE27	Q5T4F4	411 aa		7.05	□□□□□ -1.28
PSMC6-208	ENST00000554956	BORA	Q6PGQ7	559 aa		7.05	□□□□□ -1.28
PSMC6-208	ENST00000554956	KBTBD2	Q8IY47	623 aa		7.05	□□□□□ -1.28
PSMC6-208	ENST00000554956	LGI4	Q8N135	537 aa		7.05	□□□□□ -1.28
PSMC6-208	ENST00000554956	TCP11L2	Q8N4U5	519 aa		7.05	□□□□□ -1.28
PSMC6-208	ENST00000554956	ELF4	Q99607	663 aa	Predicted RBP	7.05	□□□□□ -1.28
PSMC6-208	ENST00000554956	ORAI3	Q9BRQ5	295 aa		7.05	□□□□□ -1.28
PSMC6-208	ENST00000554956	BDH2	Q9BUT1	245 aa		7.05	□□□□□ -1.28
PSMC6-208	ENST00000554956	BTBD2	Q9BX70	525 aa		7.05	□□□□□ -1.28
PSMC6-208	ENST00000554956	BARX1	Q9HBU1	254 aa	Predicted RBP	7.05	□□□□□ -1.28
PSMC6-208	ENST00000554956	ADAM29	Q9UKF5	820 aa		7.05	□□□□□ -1.28
PSMC6-208	ENST00000554956		A0A087X0B3	334 aa		7.04	□□□□□ -1.28
PSMC6-208	ENST00000554956	GSG1L2	A8MUP6	293 aa		7.04	□□□□□ -1.28
PSMC6-208	ENST00000554956	FOXD2	O60548	495 aa	Predicted RBP	7.04	□□□□□ -1.28
PSMC6-208	ENST00000554956	F2	P00734	622 aa		7.04	□□□□□ -1.28
PSMC6-208	ENST00000554956	ZNF888	P0CJ79	500 aa	Predicted RBP	7.04	□□□□□ -1.28
PSMC6-208	ENST00000554956	MYCLP1	P12525	358 aa	Predicted RBP	7.04	□□□□□ -1.28
PSMC6-208	ENST00000554956	CD83	Q01151	205 aa		7.04	□□□□□ -1.28
PSMC6-208	ENST00000554956	DSG1	Q02413	1049 aa		7.04	□□□□□ -1.28
PSMC6-208	ENST00000554956	STIL	Q15468	1287 aa		7.04	□□□□□ -1.28
PSMC6-208	ENST00000554956	ZNF174	Q15697	407 aa		7.04	□□□□□ -1.28
PSMC6-208	ENST00000554956	KANK2	Q63ZY3	851 aa		7.04	□□□□□ -1.28
PSMC6-208	ENST00000554956	ESRP1	Q6NXG1	681 aa	Known RBP	7.04	□□□□□ -1.28
PSMC6-208	ENST00000554956	DPP8	Q6V1X1	898 aa	Predicted RBP	7.04	□□□□□ -1.28
PSMC6-208	ENST00000554956	CHTF18	Q8WVB6	975 aa		7.04	□□□□□ -1.28
PSMC6-208	ENST00000554956	AJUBA	Q96IF1	538 aa		7.04	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms