RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, human

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
XRCC3-208	ENST00000554811	OGFOD1	Q8N543	542 aa		12.8	□□□□□ -0.36
XRCC3-208	ENST00000554811	NEK9	Q8TD19	979 aa		12.8	□□□□□ -0.36
XRCC3-208	ENST00000554811	RAPGEF5	Q92565	580 aa		12.8	□□□□□ -0.36
XRCC3-208	ENST00000554811	HAUS1	Q96CS2	278 aa		12.8	□□□□□ -0.36
XRCC3-208	ENST00000554811	DDX60	Q8IY21	1712 aa	Known RBP	12.8	□□□□□ -0.36
XRCC3-208	ENST00000554811	TGFB1I1	O43294	461 aa		12.8	□□□□□ -0.36
XRCC3-208	ENST00000554811	FOS	P01100	380 aa	Predicted RBP	12.8	□□□□□ -0.36
XRCC3-208	ENST00000554811	IFI35	P80217	286 aa	Predicted RBP	12.8	□□□□□ -0.36
XRCC3-208	ENST00000554811	ORC2	Q13416	577 aa	Predicted RBP	12.8	□□□□□ -0.36
XRCC3-208	ENST00000554811	TMEM132A	Q24JP5	1023 aa		12.8	□□□□□ -0.36
XRCC3-208	ENST00000554811	KDM7A	Q6ZMT4	941 aa		12.8	□□□□□ -0.36
XRCC3-208	ENST00000554811	SEPT14	Q6ZU15	432 aa		12.8	□□□□□ -0.36
XRCC3-208	ENST00000554811	TBC1D1	Q86TI0	1168 aa	Predicted RBP	12.8	□□□□□ -0.36
XRCC3-208	ENST00000554811	NT5DC3	Q86UY8	548 aa		12.8	□□□□□ -0.36
XRCC3-208	ENST00000554811	SPIRE2	Q8WWL2	714 aa		12.8	□□□□□ -0.36
XRCC3-208	ENST00000554811	ALG3	Q92685	438 aa		12.8	□□□□□ -0.36
XRCC3-208	ENST00000554811	WDR18	Q9BV38	432 aa		12.8	□□□□□ -0.36
XRCC3-208	ENST00000554811	TEKT3	Q9BXF9	490 aa		12.8	□□□□□ -0.36
XRCC3-208	ENST00000554811	GLIS2	Q9BZE0	524 aa	Predicted RBP	12.8	□□□□□ -0.36
XRCC3-208	ENST00000554811	SEMA4A	Q9H3S1	761 aa		12.8	□□□□□ -0.36
XRCC3-208	ENST00000554811	SAMD15	Q9P1V8	674 aa		12.8	□□□□□ -0.36
XRCC3-208	ENST00000554811	LARS	Q9P2J5	1176 aa	Known RBP	12.8	□□□□□ -0.36
XRCC3-208	ENST00000554811	PLCH1	Q4KWH8	1693 aa		12.8	□□□□□ -0.36
XRCC3-208	ENST00000554811	CLDN3	O15551	220 aa		12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	SGPL1	O95470	568 aa		12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	MYCN	P04198	464 aa	Predicted RBP	12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	COMT	P21964	271 aa		12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	SMARCA1	P28370	1054 aa		12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	VPS72	Q15906	364 aa		12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	FAM182A	Q5T1J6	154 aa		12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	CCDC137	Q6PK04	289 aa	Known RBP	12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	ARHGEF19	Q8IW93	802 aa		12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	SP8	Q8IXZ3	490 aa		12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	ETNPPL	Q8TBG4	499 aa		12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	DCAF4	Q8WV16	495 aa		12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	TAOK3	Q9H2K8	898 aa		12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	TMBIM4	Q9HC24	238 aa		12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	SLITRK3	O94933	977 aa		12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	LCA5L	O95447	670 aa		12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	CHN1	P15882	459 aa		12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	PMS2	P54278	862 aa		12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	JAML	Q86YT9	394 aa		12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	PIK3R5	Q8WYR1	880 aa		12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	SYN2	Q92777	582 aa	Predicted RBP	12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	FAM20A	Q96MK3	541 aa		12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	PWWP2A	Q96N64	755 aa		12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	NACC1	Q96RE7	527 aa		12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	PRMT1	Q99873	361 aa	Known RBP	12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	SH3GL2	Q99962	352 aa		12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	UNC45A	Q9H3U1	944 aa		12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	APEX2	Q9UBZ4	518 aa		12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	FAM198A	Q9UFP1	575 aa		12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	MTUS1	Q9ULD2	1270 aa		12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	PCDHA2	Q9Y5H9	948 aa		12.79	□□□□□ -0.36
XRCC3-208	ENST00000554811	RPS6KA5	O75582	802 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	NEFH	P12036	1026 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	PRELP	P51888	382 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	SEMA3F	Q13275	785 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	UBAP2	Q5T6F2	1119 aa	Known RBP	12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	HOOK3	Q86VS8	718 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	TEX2	Q8IWB9	1127 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	ZNF668	Q96K58	619 aa	Predicted RBP	12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	FAM114A2	Q9NRY5	505 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	TCRBV7S2A1N4T	A0A589	114 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	CCDC188	H7C350	402 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	APBA3	O96018	575 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	PHLDB3	Q6NSJ2	640 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	PRUNE1	Q86TP1	453 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	CCDC13	Q8IYE1	715 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	POMGNT1	Q8WZA1	660 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	AGPAT1	Q99943	283 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	NUP85	Q9BW27	656 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	WDR11	Q9BZH6	1224 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	RAVER2	Q9HCJ3	691 aa	Known RBP	12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	IFNB1	P01574	187 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	SNHG28	P0DPA3	235 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	ADCY8	P40145	1251 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	CLK2	P49760	499 aa	Known RBP	12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	BFSP1	Q12934	665 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	ITGB3BP	Q13352	177 aa	Predicted RBP	12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	CEP55	Q53EZ4	464 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	FAM47E	Q6ZV65	393 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	SH3BP5L	Q7L8J4	393 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	SEC16B	Q96JE7	1060 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	TMEM39B	Q9GZU3	492 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	EFCC1	Q9HA90	598 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	TTC7A	Q9ULT0	858 aa	Predicted RBP	12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	PITPNM2	Q9BZ72	1349 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811	LRP5	O75197	1615 aa		12.78	□□□□□ -0.36
XRCC3-208	ENST00000554811		H0YIN7	160 aa		12.77	□□□□□ -0.36
XRCC3-208	ENST00000554811	OPLAH	O14841	1288 aa		12.77	□□□□□ -0.36
XRCC3-208	ENST00000554811	TNNI1	P19237	187 aa		12.77	□□□□□ -0.36
XRCC3-208	ENST00000554811	ALDH1B1	P30837	517 aa		12.77	□□□□□ -0.36
XRCC3-208	ENST00000554811	VAMP7	P51809	220 aa		12.77	□□□□□ -0.36
XRCC3-208	ENST00000554811	DLGAP5	Q15398	846 aa		12.77	□□□□□ -0.36
XRCC3-208	ENST00000554811	ZNF394	Q53GI3	561 aa		12.77	□□□□□ -0.36
XRCC3-208	ENST00000554811	TMC3	Q7Z5M5	1100 aa		12.77	□□□□□ -0.36
XRCC3-208	ENST00000554811	SLC47A2	Q86VL8	602 aa		12.77	□□□□□ -0.36
XRCC3-208	ENST00000554811	ANKS4B	Q8N8V4	417 aa		12.77	□□□□□ -0.36
XRCC3-208	ENST00000554811	NAP1L3	Q99457	506 aa	Predicted RBP	12.77	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 46 ms