RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 EFCAB14O75071 495 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 RHOBTB3O94955 611 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 FGFR1OPO95684 399 aaKnown RBP12.24□□□□□ -0.45
SRP54-205ENST00000554803 CXCL10P02778 98 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 OAS2P29728 719 aaKnown RBP12.24□□□□□ -0.45
SRP54-205ENST00000554803 CASP14P31944 242 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 STAT6P42226 847 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 AFMP43652 599 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 GRIN1Q05586 938 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 KCNJ12Q14500 433 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 NPY5RQ15761 445 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 TUBB8Q3ZCM7 444 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 SPECC1Q5M775 1068 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 ZNF569Q5MCW4 686 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 RAD9BQ6WBX8 426 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 EP400NLQ6ZTU2 488 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 FAM160B2Q86V87 743 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 BLIDQ8IZY5 108 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 FBXL6Q8N531 539 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 CCDC155Q8N6L0 562 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 GOLGA6L1Q8N7Z2 621 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 CAGE1Q8TC20 777 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 PIGSQ96S52 555 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 LRRC27Q9C0I9 530 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 JMJD4Q9H9V9 463 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 DISC1Q9NRI5 854 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 HOMER2Q9NSB8 354 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 CLDND1Q9NY35 253 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 CAPN11Q9UMQ6 739 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 PCDHA4Q9UN74 947 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 NOD1Q9Y239 953 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 LUC7L2Q9Y383 392 aaKnown RBP12.24□□□□□ -0.45
SRP54-205ENST00000554803 DNAH14Q0VDD8 3507 aa12.24□□□□□ -0.45
SRP54-205ENST00000554803 SOWAHDA6NJG2 315 aa12.23□□□□□ -0.45
SRP54-205ENST00000554803 PROB1E7EW31 1015 aa12.23□□□□□ -0.45
SRP54-205ENST00000554803 TEX33O43247 280 aa12.23□□□□□ -0.45
SRP54-205ENST00000554803 MBTPS2O43462 519 aa12.23□□□□□ -0.45
SRP54-205ENST00000554803 PPP1R11O60927 126 aaPredicted RBP12.23□□□□□ -0.45
SRP54-205ENST00000554803 PARNO95453 639 aaKnown RBP12.23□□□□□ -0.45
SRP54-205ENST00000554803 CD44P16070 742 aaKnown RBP12.23□□□□□ -0.45
SRP54-205ENST00000554803 LTBRP36941 435 aa12.23□□□□□ -0.45
SRP54-205ENST00000554803 STAT2P52630 851 aa12.23□□□□□ -0.45
SRP54-205ENST00000554803 IKQ13123 557 aaPredicted RBP12.23□□□□□ -0.45
SRP54-205ENST00000554803 MEA1Q16626 185 aa12.23□□□□□ -0.45
SRP54-205ENST00000554803 TCTN1Q2MV58 587 aa12.23□□□□□ -0.45
SRP54-205ENST00000554803 BEND6Q5SZJ8 279 aaPredicted RBP12.23□□□□□ -0.45
SRP54-205ENST00000554803 SYDE2Q5VT97 1194 aa12.23□□□□□ -0.45
SRP54-205ENST00000554803 BTNL9Q6UXG8 535 aa12.23□□□□□ -0.45
SRP54-205ENST00000554803 DTHD1Q6ZMT9 781 aa12.23□□□□□ -0.45
SRP54-205ENST00000554803 RPAINQ86UA6 219 aa12.23□□□□□ -0.45
SRP54-205ENST00000554803 ADSSL1Q8N142 457 aa12.23□□□□□ -0.45
SRP54-205ENST00000554803 SP7Q8TDD2 431 aaPredicted RBP12.23□□□□□ -0.45
SRP54-205ENST00000554803 MORC4Q8TE76 937 aa12.23□□□□□ -0.45
SRP54-205ENST00000554803 PPP1R13LQ8WUF5 828 aa12.23□□□□□ -0.45
SRP54-205ENST00000554803 NELFBQ8WX92 580 aa12.23□□□□□ -0.45
SRP54-205ENST00000554803 ATOH1Q92858 354 aaPredicted RBP12.23□□□□□ -0.45
SRP54-205ENST00000554803 GPKOWQ92917 476 aaPredicted RBP eCLIP12.23□□□□□ -0.45
SRP54-205ENST00000554803 EPSTI1Q96J88 318 aa12.23□□□□□ -0.45
SRP54-205ENST00000554803 SAMD11Q96NU1 681 aa12.23□□□□□ -0.45
SRP54-205ENST00000554803 EDEM3Q9BZQ6 932 aa12.23□□□□□ -0.45
SRP54-205ENST00000554803 NSUN3Q9H649 340 aaKnown RBP12.23□□□□□ -0.45
SRP54-205ENST00000554803 RNF146Q9NTX7 359 aa12.23□□□□□ -0.45
SRP54-205ENST00000554803 MYO6Q9UM54 1294 aa12.23□□□□□ -0.45
SRP54-205ENST00000554803 L1RE1Q9UN81 338 aa12.23□□□□□ -0.45
SRP54-205ENST00000554803 CTNND2Q9UQB3 1225 aa12.23□□□□□ -0.45
SRP54-205ENST00000554803 INSL6Q9Y581 213 aa12.23□□□□□ -0.45
SRP54-205ENST00000554803 EPN1Q9Y6I3 576 aaPredicted RBP12.23□□□□□ -0.45
SRP54-205ENST00000554803 EP300Q09472 2414 aaPredicted RBP12.23□□□□□ -0.45
SRP54-205ENST00000554803 ADAMTS3O15072 1205 aa12.22□□□□□ -0.45
SRP54-205ENST00000554803 NCK2O43639 380 aa12.22□□□□□ -0.45
SRP54-205ENST00000554803 NDUFA10O95299 355 aa12.22□□□□□ -0.45
SRP54-205ENST00000554803 SELPP16109 830 aa12.22□□□□□ -0.45
SRP54-205ENST00000554803 KRT9P35527 623 aa12.22□□□□□ -0.45
SRP54-205ENST00000554803 HTRA4P83105 476 aaPredicted RBP12.22□□□□□ -0.45
SRP54-205ENST00000554803 KARSQ15046 597 aaKnown RBP12.22□□□□□ -0.45
SRP54-205ENST00000554803 TKFCQ3LXA3 575 aa12.22□□□□□ -0.45
SRP54-205ENST00000554803 EPC2Q52LR7 807 aa12.22□□□□□ -0.45
SRP54-205ENST00000554803 PAPD7Q5XG87 772 aaKnown RBP12.22□□□□□ -0.45
SRP54-205ENST00000554803 KLHL10Q6JEL2 608 aa12.22□□□□□ -0.45
SRP54-205ENST00000554803 FAM117BQ6P1L5 589 aa12.22□□□□□ -0.45
SRP54-205ENST00000554803 LEKR1Q6ZMV7 388 aa12.22□□□□□ -0.45
SRP54-205ENST00000554803 KRT25Q7Z3Z0 450 aa12.22□□□□□ -0.45
SRP54-205ENST00000554803 GIMAP8Q8ND71 665 aaPredicted RBP12.22□□□□□ -0.45
SRP54-205ENST00000554803 LRRN4CLQ8ND94 238 aa12.22□□□□□ -0.45
SRP54-205ENST00000554803 MTMR8Q96EF0 704 aa12.22□□□□□ -0.45
SRP54-205ENST00000554803 RRP36Q96EU6 259 aaKnown RBP12.22□□□□□ -0.45
SRP54-205ENST00000554803 PRR12Q9ULL5 1215 aa12.22□□□□□ -0.45
SRP54-205ENST00000554803 DMXL1Q9Y485 3027 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 ACACBO00763 2458 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 MYH7BA7E2Y1 1941 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 KIAA1217Q5T5P2 1943 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 A0A087X0B3 334 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 CCDC194A0A1B0GVG4 234 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 RBM47A0AV96 593 aaKnown RBP12.21□□□□□ -0.45
SRP54-205ENST00000554803 EIF3CLB5ME19 914 aaKnown RBP12.21□□□□□ -0.45
SRP54-205ENST00000554803 H3BNC9 293 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 TULP2O00295 520 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 NBNO60934 754 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 PRLRP16471 622 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 UBA7P41226 1012 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms