RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 DHX40Q8IX18 779 aaKnown RBP15.8■□□□□ 0.12
SHOX2-206ENST00000554685 NELFCDQ8IXH7 590 aa15.8■□□□□ 0.12
SHOX2-206ENST00000554685 SYCP3Q8IZU3 236 aa15.8■□□□□ 0.12
SHOX2-206ENST00000554685 RNF149Q8NC42 400 aa15.8■□□□□ 0.12
SHOX2-206ENST00000554685 GLIS3Q8NEA6 775 aa15.8■□□□□ 0.12
SHOX2-206ENST00000554685 NFKBIZQ9BYH8 718 aa15.8■□□□□ 0.12
SHOX2-206ENST00000554685 FGFBP2Q9BYJ0 223 aa15.8■□□□□ 0.12
SHOX2-206ENST00000554685 STARD7Q9NQZ5 370 aa15.8■□□□□ 0.12
SHOX2-206ENST00000554685 NFE2L3Q9Y4A8 694 aa15.8■□□□□ 0.12
SHOX2-206ENST00000554685 SCN10AQ9Y5Y9 1956 aa15.79■□□□□ 0.12
SHOX2-206ENST00000554685 RPL13P26373 211 aaKnown RBP15.79■□□□□ 0.12
SHOX2-206ENST00000554685 STX17P56962 302 aa15.79■□□□□ 0.12
SHOX2-206ENST00000554685 DRP2Q13474 957 aa15.79■□□□□ 0.12
SHOX2-206ENST00000554685 HSP90AA2PQ14568 343 aaPredicted RBP15.79■□□□□ 0.12
SHOX2-206ENST00000554685 ZC2HC1CQ53FD0 456 aaPredicted RBP15.79■□□□□ 0.12
SHOX2-206ENST00000554685 TTI2Q6NXR4 508 aa15.79■□□□□ 0.12
SHOX2-206ENST00000554685 IFNLR1Q8IU57 520 aaPredicted RBP15.79■□□□□ 0.12
SHOX2-206ENST00000554685 MAP4K3Q8IVH8 894 aa15.79■□□□□ 0.12
SHOX2-206ENST00000554685 KIAA0319LQ8IZA0 1049 aa15.79■□□□□ 0.12
SHOX2-206ENST00000554685 CRISPLD2Q9H0B8 497 aa15.79■□□□□ 0.12
SHOX2-206ENST00000554685 GBP3Q9H0R5 595 aa15.79■□□□□ 0.12
SHOX2-206ENST00000554685 KCTD10Q9H3F6 313 aa15.79■□□□□ 0.12
SHOX2-206ENST00000554685 GRPEL1Q9HAV7 217 aa15.79■□□□□ 0.12
SHOX2-206ENST00000554685 TBX20Q9UMR3 447 aa15.79■□□□□ 0.12
SHOX2-206ENST00000554685 TRAF3IP3Q9Y228 551 aa15.79■□□□□ 0.12
SHOX2-206ENST00000554685 CEP350Q5VT06 3117 aa15.79■□□□□ 0.12
SHOX2-206ENST00000554685 FRMPD3Q5JV73 1810 aa15.78■□□□□ 0.12
SHOX2-206ENST00000554685 K7ERI5 159 aa15.78■□□□□ 0.12
SHOX2-206ENST00000554685 TREHO43280 583 aa15.78■□□□□ 0.12
SHOX2-206ENST00000554685 SGPL1O95470 568 aa15.78■□□□□ 0.12
SHOX2-206ENST00000554685 MYCP01106 439 aaPredicted RBP15.78■□□□□ 0.12
SHOX2-206ENST00000554685 SRGAP2CP0DJJ0 459 aa15.78■□□□□ 0.12
SHOX2-206ENST00000554685 FKBP3Q00688 224 aaKnown RBP15.78■□□□□ 0.12
SHOX2-206ENST00000554685 NCAPHQ15003 741 aa15.78■□□□□ 0.12
SHOX2-206ENST00000554685 NFIL3Q16649 462 aa15.78■□□□□ 0.12
SHOX2-206ENST00000554685 ZCWPW2Q504Y3 356 aa15.78■□□□□ 0.12
SHOX2-206ENST00000554685 FAM114A1Q8IWE2 563 aa15.78■□□□□ 0.12
SHOX2-206ENST00000554685 CSGALNACT2Q8N6G5 542 aa15.78■□□□□ 0.12
SHOX2-206ENST00000554685 NLRP4Q96MN2 994 aa15.78■□□□□ 0.12
SHOX2-206ENST00000554685 SCLT1Q96NL6 688 aa15.78■□□□□ 0.12
SHOX2-206ENST00000554685 SEMA6BQ9H3T3 888 aa15.78■□□□□ 0.12
SHOX2-206ENST00000554685 THAP9Q9H5L6 903 aa15.78■□□□□ 0.12
SHOX2-206ENST00000554685 NOD1Q9Y239 953 aa15.78■□□□□ 0.12
SHOX2-206ENST00000554685 ADGRA3Q8IWK6 1321 aa15.77■□□□□ 0.12
SHOX2-206ENST00000554685 M0QZ92 97 aa15.77■□□□□ 0.12
SHOX2-206ENST00000554685 TFRCP02786 760 aaKnown RBP15.77■□□□□ 0.12
SHOX2-206ENST00000554685 PTENP60484 403 aa15.77■□□□□ 0.12
SHOX2-206ENST00000554685 SPAG1Q07617 926 aa15.77■□□□□ 0.12
SHOX2-206ENST00000554685 MYBPC2Q14324 1141 aa15.77■□□□□ 0.12
SHOX2-206ENST00000554685 PCBP1Q15365 356 aaKnown RBP eCLIP15.77■□□□□ 0.12
SHOX2-206ENST00000554685 MAPK6Q16659 721 aa15.77■□□□□ 0.12
SHOX2-206ENST00000554685 ANKRD40Q6AI12 368 aa15.77■□□□□ 0.12
SHOX2-206ENST00000554685 GDF6Q6KF10 455 aaPredicted RBP15.77■□□□□ 0.12
SHOX2-206ENST00000554685 SRGAP1Q7Z6B7 1085 aa15.77■□□□□ 0.12
SHOX2-206ENST00000554685 RPAINQ86UA6 219 aa15.77■□□□□ 0.12
SHOX2-206ENST00000554685 ANKLE1Q8NAG6 615 aa15.77■□□□□ 0.12
SHOX2-206ENST00000554685 ANKRD20A12PQ8NF67 263 aa15.77■□□□□ 0.12
SHOX2-206ENST00000554685 U2AF1L4Q8WU68 220 aaKnown RBP15.77■□□□□ 0.12
SHOX2-206ENST00000554685 NLRP7Q8WX94 980 aa15.77■□□□□ 0.12
SHOX2-206ENST00000554685 BICD1Q96G01 975 aa15.77■□□□□ 0.12
SHOX2-206ENST00000554685 CEP63Q96MT8 703 aa15.77■□□□□ 0.12
SHOX2-206ENST00000554685 KIFC3Q9BVG8 833 aa15.77■□□□□ 0.12
SHOX2-206ENST00000554685 TMEM106CQ9BVX2 250 aa15.77■□□□□ 0.12
SHOX2-206ENST00000554685 GCOM2Q9BZD3 368 aaPredicted RBP15.77■□□□□ 0.12
SHOX2-206ENST00000554685 INO80BQ9C086 356 aaPredicted RBP15.77■□□□□ 0.12
SHOX2-206ENST00000554685 FAM49AQ9H0Q0 323 aaPredicted RBP15.77■□□□□ 0.12
SHOX2-206ENST00000554685 MAGEC2Q9UBF1 373 aaPredicted RBP15.77■□□□□ 0.12
SHOX2-206ENST00000554685 MYH11P35749 1972 aa15.76■□□□□ 0.11
SHOX2-206ENST00000554685 PCNTO95613 3336 aa15.76■□□□□ 0.11
SHOX2-206ENST00000554685 GRIN2DO15399 1336 aa15.76■□□□□ 0.11
SHOX2-206ENST00000554685 TRIM49BA6NDI0 452 aa15.76■□□□□ 0.11
SHOX2-206ENST00000554685 ARVCFO00192 962 aa15.76■□□□□ 0.11
SHOX2-206ENST00000554685 CETN3O15182 167 aa15.76■□□□□ 0.11
SHOX2-206ENST00000554685 PIGRP01833 764 aa15.76■□□□□ 0.11
SHOX2-206ENST00000554685 VTNP04004 478 aa15.76■□□□□ 0.11
SHOX2-206ENST00000554685 GJA8P48165 433 aa15.76■□□□□ 0.11
SHOX2-206ENST00000554685 GPC3P51654 580 aa15.76■□□□□ 0.11
SHOX2-206ENST00000554685 PTK7Q13308 1070 aa15.76■□□□□ 0.11
SHOX2-206ENST00000554685 PTGISQ16647 500 aa15.76■□□□□ 0.11
SHOX2-206ENST00000554685 RUFY4Q6ZNE9 571 aa15.76■□□□□ 0.11
SHOX2-206ENST00000554685 SERINC5Q86VE9 423 aa15.76■□□□□ 0.11
SHOX2-206ENST00000554685 C12orf56Q8IXR9 622 aa15.76■□□□□ 0.11
SHOX2-206ENST00000554685 SLC43A3Q8NBI5 491 aa15.76■□□□□ 0.11
SHOX2-206ENST00000554685 ANP32BQ92688 251 aaKnown RBP15.76■□□□□ 0.11
SHOX2-206ENST00000554685 ZBTB10Q96DT7 871 aa15.76■□□□□ 0.11
SHOX2-206ENST00000554685 DUSP9Q99956 384 aaKnown RBP15.76■□□□□ 0.11
SHOX2-206ENST00000554685 PRMT7Q9NVM4 692 aaPredicted RBP15.76■□□□□ 0.11
SHOX2-206ENST00000554685 ZMYM2Q9UBW7 1377 aa15.75■□□□□ 0.11
SHOX2-206ENST00000554685 MROH7Q68CQ1 1323 aa15.75■□□□□ 0.11
SHOX2-206ENST00000554685 A0A087WZ62 844 aa15.75■□□□□ 0.11
SHOX2-206ENST00000554685 SPDYE4A6NLX3 237 aa15.75■□□□□ 0.11
SHOX2-206ENST00000554685 INO80B-WBP1J3KQ70 363 aa15.75■□□□□ 0.11
SHOX2-206ENST00000554685 HNRNPDLO14979 420 aaKnown RBP15.75■□□□□ 0.11
SHOX2-206ENST00000554685 KIAA0391O15091 583 aaKnown RBP15.75■□□□□ 0.11
SHOX2-206ENST00000554685 CAND2O75155 1236 aa15.75■□□□□ 0.11
SHOX2-206ENST00000554685 GNA14O95837 355 aa15.75■□□□□ 0.11
SHOX2-206ENST00000554685 PRKCBP05771 671 aa15.75■□□□□ 0.11
SHOX2-206ENST00000554685 CDK11BP21127 795 aaKnown RBP15.75■□□□□ 0.11
SHOX2-206ENST00000554685 HOXD13P35453 343 aa15.75■□□□□ 0.11
SHOX2-206ENST00000554685 LIG4P49917 911 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms