RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 A0A0U1RQF3 1178 aa11.83□□□□□ -0.52
SHMT2-213ENST00000554600 GRM6O15303 877 aa11.83□□□□□ -0.52
SHMT2-213ENST00000554600 EOMESO95936 686 aa11.83□□□□□ -0.52
SHMT2-213ENST00000554600 HSP90AA1P07900 732 aaKnown RBP11.83□□□□□ -0.52
SHMT2-213ENST00000554600 SKIP12755 728 aa11.83□□□□□ -0.52
SHMT2-213ENST00000554600 MUTP22033 750 aa11.83□□□□□ -0.52
SHMT2-213ENST00000554600 GLRA2P23416 452 aa11.83□□□□□ -0.52
SHMT2-213ENST00000554600 RAB27AP51159 221 aa11.83□□□□□ -0.52
SHMT2-213ENST00000554600 PTENP60484 403 aa11.83□□□□□ -0.52
SHMT2-213ENST00000554600 ATP2C1P98194 919 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-213ENST00000554600 CAPSQ13938 189 aa11.83□□□□□ -0.52
SHMT2-213ENST00000554600 TMEM132AQ24JP5 1023 aa11.83□□□□□ -0.52
SHMT2-213ENST00000554600 BRAPQ7Z569 592 aa11.83□□□□□ -0.52
SHMT2-213ENST00000554600 HSCBQ8IWL3 235 aa11.83□□□□□ -0.52
SHMT2-213ENST00000554600 THNSL1Q8IYQ7 743 aa11.83□□□□□ -0.52
SHMT2-213ENST00000554600 LRRC43Q8N309 656 aa11.83□□□□□ -0.52
SHMT2-213ENST00000554600 IGSF22Q8N9C0 903 aa11.83□□□□□ -0.52
SHMT2-213ENST00000554600 KLHL23Q8NBE8 558 aa11.83□□□□□ -0.52
SHMT2-213ENST00000554600 LPPQ93052 612 aa11.83□□□□□ -0.52
SHMT2-213ENST00000554600 CDK5RAP3Q96JB5 506 aa11.83□□□□□ -0.52
SHMT2-213ENST00000554600 BHMT2Q9H2M3 363 aa11.83□□□□□ -0.52
SHMT2-213ENST00000554600 AGPAT5Q9NUQ2 364 aa11.83□□□□□ -0.52
SHMT2-213ENST00000554600 FAM105AQ9NUU6 356 aa11.83□□□□□ -0.52
SHMT2-213ENST00000554600 TYW1Q9NV66 732 aaKnown RBP11.83□□□□□ -0.52
SHMT2-213ENST00000554600 HCSTQ9UBK5 93 aa11.83□□□□□ -0.52
SHMT2-213ENST00000554600 INPP5FQ9Y2H2 1132 aa11.83□□□□□ -0.52
SHMT2-213ENST00000554600 REV3LO60673 3130 aa11.82□□□□□ -0.52
SHMT2-213ENST00000554600 E9PMD0 336 aa11.82□□□□□ -0.52
SHMT2-213ENST00000554600 C5orf67F2Z3F1 127 aa11.82□□□□□ -0.52
SHMT2-213ENST00000554600 SSBP05455 408 aaKnown RBP eCLIP11.82□□□□□ -0.52
SHMT2-213ENST00000554600 ITGB1P05556 798 aa11.82□□□□□ -0.52
SHMT2-213ENST00000554600 LINC00271P0C7V0 271 aa11.82□□□□□ -0.52
SHMT2-213ENST00000554600 LAG3P18627 525 aa11.82□□□□□ -0.52
SHMT2-213ENST00000554600 LIG1P18858 919 aa11.82□□□□□ -0.52
SHMT2-213ENST00000554600 ARL2P36404 184 aa11.82□□□□□ -0.52
SHMT2-213ENST00000554600 MRPS5P82675 430 aaKnown RBP11.82□□□□□ -0.52
SHMT2-213ENST00000554600 TFF2Q03403 129 aa11.82□□□□□ -0.52
SHMT2-213ENST00000554600 IL17AQ16552 155 aa11.82□□□□□ -0.52
SHMT2-213ENST00000554600 ECM1Q16610 540 aa11.82□□□□□ -0.52
SHMT2-213ENST00000554600 CLLU1OSQ5K130 101 aa11.82□□□□□ -0.52
SHMT2-213ENST00000554600 GLB1LQ6UWU2 654 aa11.82□□□□□ -0.52
SHMT2-213ENST00000554600 ZBTB8OSQ8IWT0 167 aa11.82□□□□□ -0.52
SHMT2-213ENST00000554600 COLGALT1Q8NBJ5 622 aa11.82□□□□□ -0.52
SHMT2-213ENST00000554600 SYMPKQ92797 1274 aaKnown RBP11.82□□□□□ -0.52
SHMT2-213ENST00000554600 P2RX5Q93086 422 aa11.82□□□□□ -0.52
SHMT2-213ENST00000554600 HLA-CQ95604 372 aa11.82□□□□□ -0.52
SHMT2-213ENST00000554600 PGBD4Q96DM1 585 aa11.82□□□□□ -0.52
SHMT2-213ENST00000554600 CPB2Q96IY4 423 aa11.82□□□□□ -0.52
SHMT2-213ENST00000554600 CASD1Q96PB1 797 aa11.82□□□□□ -0.52
SHMT2-213ENST00000554600 LMAN2LQ9H0V9 348 aa11.82□□□□□ -0.52
SHMT2-213ENST00000554600 NSUN3Q9H649 340 aaKnown RBP11.82□□□□□ -0.52
SHMT2-213ENST00000554600 POLD4Q9HCU8 107 aa11.82□□□□□ -0.52
SHMT2-213ENST00000554600 RNF19AQ9NV58 838 aa11.82□□□□□ -0.52
SHMT2-213ENST00000554600 COG5Q9UP83 839 aa11.82□□□□□ -0.52
SHMT2-213ENST00000554600 PLAGL2Q9UPG8 496 aa11.82□□□□□ -0.52
SHMT2-213ENST00000554600 DNM3Q9UQ16 869 aa11.82□□□□□ -0.52
SHMT2-213ENST00000554600 PCDHB2Q9Y5E7 798 aa11.82□□□□□ -0.52
SHMT2-213ENST00000554600 BMP15O95972 392 aa11.81□□□□□ -0.52
SHMT2-213ENST00000554600 ATF7P17544 494 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-213ENST00000554600 CYP11B2P19099 503 aa11.81□□□□□ -0.52
SHMT2-213ENST00000554600 SYT1P21579 422 aa11.81□□□□□ -0.52
SHMT2-213ENST00000554600 RNASELQ05823 741 aaKnown RBP11.81□□□□□ -0.52
SHMT2-213ENST00000554600 MBTD1Q05BQ5 628 aa11.81□□□□□ -0.52
SHMT2-213ENST00000554600 AAK1Q2M2I8 961 aa11.81□□□□□ -0.52
SHMT2-213ENST00000554600 NAALADL2Q58DX5 795 aa11.81□□□□□ -0.52
SHMT2-213ENST00000554600 TCEAL5Q5H9L2 206 aa11.81□□□□□ -0.52
SHMT2-213ENST00000554600 TJAP1Q5JTD0 557 aa11.81□□□□□ -0.52
SHMT2-213ENST00000554600 NOTUMQ6P988 496 aa11.81□□□□□ -0.52
SHMT2-213ENST00000554600 ZNF598Q86UK7 904 aaKnown RBP11.81□□□□□ -0.52
SHMT2-213ENST00000554600 RASSF8Q8NHQ8 419 aa11.81□□□□□ -0.52
SHMT2-213ENST00000554600 DEPTORQ8TB45 409 aa11.81□□□□□ -0.52
SHMT2-213ENST00000554600 MICAL1Q8TDZ2 1067 aa11.81□□□□□ -0.52
SHMT2-213ENST00000554600 ATXN2LQ8WWM7 1075 aaKnown RBP11.81□□□□□ -0.52
SHMT2-213ENST00000554600 INTS4Q96HW7 963 aaKnown RBP11.81□□□□□ -0.52
SHMT2-213ENST00000554600 IFT74Q96LB3 600 aa11.81□□□□□ -0.52
SHMT2-213ENST00000554600 ZNF558Q96NG5 402 aa11.81□□□□□ -0.52
SHMT2-213ENST00000554600 PLIN2Q99541 437 aa11.81□□□□□ -0.52
SHMT2-213ENST00000554600 MRPL9Q9BYD2 267 aaKnown RBP11.81□□□□□ -0.52
SHMT2-213ENST00000554600 TRIM6Q9C030 488 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-213ENST00000554600 IGFLR1Q9H665 355 aa11.81□□□□□ -0.52
SHMT2-213ENST00000554600 TCHHQ07283 1943 aa11.81□□□□□ -0.52
SHMT2-213ENST00000554600 TSPAN1O60635 241 aa11.8□□□□□ -0.52
SHMT2-213ENST00000554600 FGF18O76093 207 aa11.8□□□□□ -0.52
SHMT2-213ENST00000554600 EYA4O95677 639 aa11.8□□□□□ -0.52
SHMT2-213ENST00000554600 AXLP30530 894 aa11.8□□□□□ -0.52
SHMT2-213ENST00000554600 PBX3P40426 434 aa11.8□□□□□ -0.52
SHMT2-213ENST00000554600 CEBPZQ03701 1054 aaKnown RBP11.8□□□□□ -0.52
SHMT2-213ENST00000554600 POU5F1BQ06416 359 aa11.8□□□□□ -0.52
SHMT2-213ENST00000554600 PPP2R5AQ15172 486 aa11.8□□□□□ -0.52
SHMT2-213ENST00000554600 PCBP1Q15365 356 aaKnown RBP eCLIP11.8□□□□□ -0.52
SHMT2-213ENST00000554600 SF3A1Q15459 793 aaKnown RBP11.8□□□□□ -0.52
SHMT2-213ENST00000554600 CSPP1Q1MSJ5 1256 aa11.8□□□□□ -0.52
SHMT2-213ENST00000554600 ARL6IP4Q66PJ3 421 aaKnown RBP11.8□□□□□ -0.52
SHMT2-213ENST00000554600 KCNT2Q6UVM3 1135 aa11.8□□□□□ -0.52
SHMT2-213ENST00000554600 SPPL3Q8TCT6 385 aa11.8□□□□□ -0.52
SHMT2-213ENST00000554600 URGCPQ8TCY9 931 aa11.8□□□□□ -0.52
SHMT2-213ENST00000554600 POF1BQ8WVV4 589 aa11.8□□□□□ -0.52
SHMT2-213ENST00000554600 PPP2R3CQ969Q6 453 aa11.8□□□□□ -0.52
SHMT2-213ENST00000554600 ASB2Q96Q27 587 aa11.8□□□□□ -0.52
SHMT2-213ENST00000554600 APOL6Q9BWW8 343 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms