RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 ZNF655Q8N720 491 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-228ENST00000554592 ANKRD44Q8N8A2 993 aa5.98□□□□□ -1.45
ATXN3-228ENST00000554592 PDZD8Q8NEN9 1154 aa5.98□□□□□ -1.45
ATXN3-228ENST00000554592 FAM122AQ96E09 287 aa5.98□□□□□ -1.45
ATXN3-228ENST00000554592 EDC3Q96F86 508 aaKnown RBP5.98□□□□□ -1.45
ATXN3-228ENST00000554592 DNAJC7Q99615 494 aa5.98□□□□□ -1.45
ATXN3-228ENST00000554592 TTYH1Q9H313 450 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-228ENST00000554592 BICC1Q9H694 974 aaKnown RBP5.98□□□□□ -1.45
ATXN3-228ENST00000554592 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.98□□□□□ -1.45
ATXN3-228ENST00000554592 AS3MTQ9HBK9 375 aa5.98□□□□□ -1.45
ATXN3-228ENST00000554592 FAM86C1Q9NVL1 165 aa5.98□□□□□ -1.45
ATXN3-228ENST00000554592 FAM53CQ9NYF3 392 aa5.98□□□□□ -1.45
ATXN3-228ENST00000554592 MRPL42Q9Y6G3 142 aaKnown RBP5.98□□□□□ -1.45
ATXN3-228ENST00000554592 GAKO14976 1311 aa5.98□□□□□ -1.45
ATXN3-228ENST00000554592 ZSWIM8A7E2V4 1837 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 LRRC10BA6NIK2 292 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 C19orf81C9J6K1 198 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 DNM1LO00429 736 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 SIGLEC6O43699 453 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 GLRX3O76003 335 aaKnown RBP5.97□□□□□ -1.45
ATXN3-228ENST00000554592 MAP4K4O95819 1239 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-228ENST00000554592 EFEMP2O95967 443 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 TP53P04637 393 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-228ENST00000554592 TRHRP34981 398 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-228ENST00000554592 PLA2G5P39877 138 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 CTSKP43235 329 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 BACE1P56817 501 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 RTP1P59025 263 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 HERVK_113P62684 666 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 PICALMQ13492 652 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 CLEC16AQ2KHT3 1053 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 BBS9Q3SYG4 887 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 C9orf50Q5SZB4 431 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 SPTY2D1Q68D10 685 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-228ENST00000554592 RNF111Q6ZNA4 994 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 PRR23BQ6ZRT6 265 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 GPR142Q7Z601 462 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 PLEKHH3Q7Z736 793 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 WDR63Q8IWG1 891 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 LILRB2Q8N423 598 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 ARRDC4Q8NCT1 418 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 ABHD4Q8TB40 342 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 KLHDC4Q8TBB5 520 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 LPAR1Q92633 364 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 KRTAP4-7Q9BYR0 210 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 PRKRIP1Q9H875 184 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-228ENST00000554592 TXNRD2Q9NNW7 524 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 DDX4Q9NQI0 724 aaKnown RBP5.97□□□□□ -1.45
ATXN3-228ENST00000554592 TMOD4Q9NZQ9 345 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-228ENST00000554592 RBPJLQ9UBG7 517 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 TMA7Q9Y2S6 64 aaKnown RBP5.97□□□□□ -1.45
ATXN3-228ENST00000554592 FANCIQ9NVI1 1328 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 OTOFQ9HC10 1997 aa5.97□□□□□ -1.45
ATXN3-228ENST00000554592 GPR75-ASB3A0A0A6YYF3 556 aa5.96□□□□□ -1.46
ATXN3-228ENST00000554592 LDHCP07864 332 aa5.96□□□□□ -1.46
ATXN3-228ENST00000554592 BTDP43251 543 aa5.96□□□□□ -1.46
ATXN3-228ENST00000554592 AUHQ13825 339 aaKnown RBP5.96□□□□□ -1.46
ATXN3-228ENST00000554592 CCL14Q16627 93 aa5.96□□□□□ -1.46
ATXN3-228ENST00000554592 MLANAQ16655 118 aa5.96□□□□□ -1.46
ATXN3-228ENST00000554592 AXDND1Q5T1B0 1012 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-228ENST00000554592 SLC39A5Q6ZMH5 540 aa5.96□□□□□ -1.46
ATXN3-228ENST00000554592 SPATC1Q76KD6 591 aa5.96□□□□□ -1.46
ATXN3-228ENST00000554592 EEPD1Q7L9B9 569 aa5.96□□□□□ -1.46
ATXN3-228ENST00000554592 DZIP1Q86YF9 867 aaKnown RBP5.96□□□□□ -1.46
ATXN3-228ENST00000554592 ATXN2LQ8WWM7 1075 aaKnown RBP5.96□□□□□ -1.46
ATXN3-228ENST00000554592 BADQ92934 168 aa5.96□□□□□ -1.46
ATXN3-228ENST00000554592 RNPC3Q96LT9 517 aaKnown RBP5.96□□□□□ -1.46
ATXN3-228ENST00000554592 APBA2Q99767 749 aa5.96□□□□□ -1.46
ATXN3-228ENST00000554592 FOXP3Q9BZS1 431 aa5.96□□□□□ -1.46
ATXN3-228ENST00000554592 KANSL2Q9H9L4 492 aa5.96□□□□□ -1.46
ATXN3-228ENST00000554592 CWC22Q9HCG8 908 aaKnown RBP5.96□□□□□ -1.46
ATXN3-228ENST00000554592 ABCF2Q9UG63 623 aa5.96□□□□□ -1.46
ATXN3-228ENST00000554592 SUSD2Q9UGT4 822 aa5.96□□□□□ -1.46
ATXN3-228ENST00000554592 DDX20Q9UHI6 824 aaKnown RBP5.96□□□□□ -1.46
ATXN3-228ENST00000554592 HERC5Q9UII4 1024 aaKnown RBP5.96□□□□□ -1.46
ATXN3-228ENST00000554592 ATP11BQ9Y2G3 1177 aa5.96□□□□□ -1.46
ATXN3-228ENST00000554592 COL2A1P02458 1487 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-228ENST00000554592 ECM29Q5VYK3 1845 aa5.95□□□□□ -1.46
ATXN3-228ENST00000554592 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-228ENST00000554592 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-228ENST00000554592 SLC15A5A6NIM6 579 aa5.95□□□□□ -1.46
ATXN3-228ENST00000554592 CBFA2T2O43439 604 aa5.95□□□□□ -1.46
ATXN3-228ENST00000554592 SUSD5O60279 629 aa5.95□□□□□ -1.46
ATXN3-228ENST00000554592 PEX10O60683 326 aa5.95□□□□□ -1.46
ATXN3-228ENST00000554592 KRT1P04264 644 aa5.95□□□□□ -1.46
ATXN3-228ENST00000554592 ASNSP08243 561 aa5.95□□□□□ -1.46
ATXN3-228ENST00000554592 RAC2P15153 192 aa5.95□□□□□ -1.46
ATXN3-228ENST00000554592 CNGA1P29973 690 aa5.95□□□□□ -1.46
ATXN3-228ENST00000554592 RFX5P48382 616 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-228ENST00000554592 RHBDL3P58872 404 aa5.95□□□□□ -1.46
ATXN3-228ENST00000554592 CHMP4BP1P59074 171 aa5.95□□□□□ -1.46
ATXN3-228ENST00000554592 CCNA1P78396 465 aa5.95□□□□□ -1.46
ATXN3-228ENST00000554592 IFRD2Q12894 506 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-228ENST00000554592 RRP1BQ14684 758 aaKnown RBP5.95□□□□□ -1.46
ATXN3-228ENST00000554592 ATP2B3Q16720 1220 aa5.95□□□□□ -1.46
ATXN3-228ENST00000554592 MTERF2Q49AM1 385 aa5.95□□□□□ -1.46
ATXN3-228ENST00000554592 ANKRD39Q53RE8 183 aa5.95□□□□□ -1.46
ATXN3-228ENST00000554592 SDE2Q6IQ49 451 aa5.95□□□□□ -1.46
ATXN3-228ENST00000554592 ATG9AQ7Z3C6 839 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms