RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 UBA5Q9GZZ9 404 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 SUDS3Q9H7L9 328 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-227ENST00000554491 NMRK2Q9NPI5 230 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 MED4Q9NPJ6 270 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 JADE2Q9NQC1 790 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 ACTR10Q9NZ32 417 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 CGNQ9P2M7 1197 aaKnown RBP5.25□□□□□ -1.57
ATXN3-227ENST00000554491 SYNPO2Q9UMS6 1093 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 SMC3Q9UQE7 1217 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 FRMD4BQ9Y2L6 1034 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 ZDHHC9Q9Y397 364 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 RPS6KL1Q9Y6S9 549 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 RAB3GAP2Q9H2M9 1393 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 TOGARAM1Q9Y4F4 1720 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 PXDNLA1KZ92 1463 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 ARFGEF1Q9Y6D6 1849 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 N4BP2Q86UW6 1770 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-227ENST00000554491 EXOC5O00471 708 aa5.24□□□□□ -1.57
ATXN3-227ENST00000554491 PPP1R12AO14974 1030 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-227ENST00000554491 MARCH6O60337 910 aa5.24□□□□□ -1.57
ATXN3-227ENST00000554491 OFD1O75665 1012 aa5.24□□□□□ -1.57
ATXN3-227ENST00000554491 IPO7O95373 1038 aaKnown RBP5.24□□□□□ -1.57
ATXN3-227ENST00000554491 CAPNS1P04632 268 aa5.24□□□□□ -1.57
ATXN3-227ENST00000554491 COL6A1P12109 1028 aa5.24□□□□□ -1.57
ATXN3-227ENST00000554491 KCNJ4P48050 445 aa5.24□□□□□ -1.57
ATXN3-227ENST00000554491 CD151P48509 253 aa5.24□□□□□ -1.57
ATXN3-227ENST00000554491 TDO2P48775 406 aa5.24□□□□□ -1.57
ATXN3-227ENST00000554491 FSTL1Q12841 308 aa5.24□□□□□ -1.57
ATXN3-227ENST00000554491 NFATC3Q12968 1075 aa5.24□□□□□ -1.57
ATXN3-227ENST00000554491 CCDC181Q5TID7 509 aa5.24□□□□□ -1.57
ATXN3-227ENST00000554491 TRMT10BQ6PF06 316 aaKnown RBP5.24□□□□□ -1.57
ATXN3-227ENST00000554491 ARHGEF18Q6ZSZ5 1173 aa5.24□□□□□ -1.57
ATXN3-227ENST00000554491 PROSER1Q86XN7 944 aa5.24□□□□□ -1.57
ATXN3-227ENST00000554491 RBM12BQ8IXT5 1001 aaKnown RBP5.24□□□□□ -1.57
ATXN3-227ENST00000554491 NUDT10Q8NFP7 164 aa5.24□□□□□ -1.57
ATXN3-227ENST00000554491 NUDT11Q96G61 164 aa5.24□□□□□ -1.57
ATXN3-227ENST00000554491 CCDC140Q96MF4 163 aa5.24□□□□□ -1.57
ATXN3-227ENST00000554491 ZNF747Q9BV97 191 aa5.24□□□□□ -1.57
ATXN3-227ENST00000554491 JAM3Q9BX67 310 aa5.24□□□□□ -1.57
ATXN3-227ENST00000554491 EPB41L1Q9H4G0 881 aa5.24□□□□□ -1.57
ATXN3-227ENST00000554491 CCSER2Q9H7U1 834 aa5.24□□□□□ -1.57
ATXN3-227ENST00000554491 FTSJ1Q9UET6 329 aa5.24□□□□□ -1.57
ATXN3-227ENST00000554491 PLEKHG2Q9H7P9 1386 aa5.24□□□□□ -1.57
ATXN3-227ENST00000554491 ADGRB1O14514 1584 aa5.24□□□□□ -1.57
ATXN3-227ENST00000554491 RAD50Q92878 1312 aa5.23□□□□□ -1.57
ATXN3-227ENST00000554491 USP6P35125 1406 aa5.23□□□□□ -1.57
ATXN3-227ENST00000554491 SPATA31E1Q6ZUB1 1445 aa5.23□□□□□ -1.57
ATXN3-227ENST00000554491 PATE3B3GLJ2 98 aa5.23□□□□□ -1.57
ATXN3-227ENST00000554491 DDAH1O94760 285 aa5.23□□□□□ -1.57
ATXN3-227ENST00000554491 AMHP03971 560 aa5.23□□□□□ -1.57
ATXN3-227ENST00000554491 ACVRL1P37023 503 aa5.23□□□□□ -1.57
ATXN3-227ENST00000554491 GTF2A1P52655 376 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-227ENST00000554491 FOXD4Q12950 439 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-227ENST00000554491 SAFB2Q14151 953 aaKnown RBP eCLIP5.23□□□□□ -1.57
ATXN3-227ENST00000554491 KLHL36Q8N4N3 616 aa5.23□□□□□ -1.57
ATXN3-227ENST00000554491 NGDNQ8NEJ9 315 aaKnown RBP5.23□□□□□ -1.57
ATXN3-227ENST00000554491 PIP4K2CQ8TBX8 421 aa5.23□□□□□ -1.57
ATXN3-227ENST00000554491 CHMP4CQ96CF2 233 aa5.23□□□□□ -1.57
ATXN3-227ENST00000554491 PRAM1Q96QH2 718 aa5.23□□□□□ -1.57
ATXN3-227ENST00000554491 MEGF9Q9H1U4 602 aa5.23□□□□□ -1.57
ATXN3-227ENST00000554491 DEF6Q9H4E7 631 aa5.23□□□□□ -1.57
ATXN3-227ENST00000554491 SMOC1Q9H4F8 434 aa5.23□□□□□ -1.57
ATXN3-227ENST00000554491 MAGEC2Q9UBF1 373 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-227ENST00000554491 PPARGC1AQ9UBK2 798 aaKnown RBP5.23□□□□□ -1.57
ATXN3-227ENST00000554491 ISY1Q9ULR0 285 aaKnown RBP5.23□□□□□ -1.57
ATXN3-227ENST00000554491 CD2APQ9Y5K6 639 aa5.23□□□□□ -1.57
ATXN3-227ENST00000554491 NPFFR2Q9Y5X5 522 aa5.23□□□□□ -1.57
ATXN3-227ENST00000554491 VIRMAQ69YN4 1812 aaKnown RBP5.23□□□□□ -1.57
ATXN3-227ENST00000554491 TIAM2Q8IVF5 1701 aa5.23□□□□□ -1.57
ATXN3-227ENST00000554491 KCPQ6ZWJ8 1503 aa5.23□□□□□ -1.57
ATXN3-227ENST00000554491 PPIP5K1Q6PFW1 1433 aa5.23□□□□□ -1.57
ATXN3-227ENST00000554491 IGSF1Q8N6C5 1336 aa5.23□□□□□ -1.57
ATXN3-227ENST00000554491 UBR3Q6ZT12 1888 aa5.22□□□□□ -1.57
ATXN3-227ENST00000554491 POLR3AO14802 1390 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-227ENST00000554491 SLC27A2O14975 620 aa5.22□□□□□ -1.57
ATXN3-227ENST00000554491 MSCO60682 206 aa5.22□□□□□ -1.57
ATXN3-227ENST00000554491 CYP7B1O75881 506 aa5.22□□□□□ -1.57
ATXN3-227ENST00000554491 ETFBP38117 255 aa5.22□□□□□ -1.57
ATXN3-227ENST00000554491 PEX19P40855 299 aa5.22□□□□□ -1.57
ATXN3-227ENST00000554491 GDF5P43026 501 aa5.22□□□□□ -1.57
ATXN3-227ENST00000554491 HMGA2P52926 109 aa5.22□□□□□ -1.57
ATXN3-227ENST00000554491 GRIN1Q05586 938 aa5.22□□□□□ -1.57
ATXN3-227ENST00000554491 TRDNQ13061 729 aa5.22□□□□□ -1.57
ATXN3-227ENST00000554491 SLFN13Q68D06 897 aa5.22□□□□□ -1.57
ATXN3-227ENST00000554491 EP400NLQ6ZTU2 488 aa5.22□□□□□ -1.57
ATXN3-227ENST00000554491 C16orf71Q8IYS4 520 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-227ENST00000554491 LSM14AQ8ND56 463 aaKnown RBP5.22□□□□□ -1.57
ATXN3-227ENST00000554491 ZCRB1Q8TBF4 217 aaKnown RBP5.22□□□□□ -1.57
ATXN3-227ENST00000554491 CLEC4DQ8WXI8 215 aa5.22□□□□□ -1.57
ATXN3-227ENST00000554491 VPS11Q9H270 941 aa5.22□□□□□ -1.57
ATXN3-227ENST00000554491 CALCOCO1Q9P1Z2 691 aa5.22□□□□□ -1.57
ATXN3-227ENST00000554491 ASH2LQ9UBL3 628 aa5.22□□□□□ -1.57
ATXN3-227ENST00000554491 ABCF2Q9UG63 623 aa5.22□□□□□ -1.57
ATXN3-227ENST00000554491 PAXBP1Q9Y5B6 917 aa5.22□□□□□ -1.57
ATXN3-227ENST00000554491 CPSF1Q10570 1443 aaKnown RBP5.22□□□□□ -1.57
ATXN3-227ENST00000554491 SBF1O95248 1867 aa5.22□□□□□ -1.57
ATXN3-227ENST00000554491 WDR17Q8IZU2 1322 aa5.22□□□□□ -1.57
ATXN3-227ENST00000554491 SYNRGQ9UMZ2 1314 aa5.22□□□□□ -1.57
ATXN3-227ENST00000554491 EPB41L2O43491 1005 aaKnown RBP5.21□□□□□ -1.58
ATXN3-227ENST00000554491 KLHL18O94889 574 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms