RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 SPATA4Q8NEY3 305 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 TNFRSF25Q93038 417 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 ZIM3Q96PE6 472 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 UBAC1Q9BSL1 405 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 PBX4Q9BYU1 374 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 TTYH3Q9C0H2 523 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 RBM12Q9NTZ6 932 aaKnown RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 PFDN2Q9UHV9 154 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 ZMYM5Q9UJ78 669 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 SNX12Q9UMY4 172 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 CYP8B1Q9UNU6 501 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 PARP4Q9UKK3 1724 aaKnown RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 ABCC12Q96J65 1359 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 BAZ2AQ9UIF9 1905 aaKnown RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 KIF13AQ9H1H9 1805 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 LOC102724428A0A0B4J2F2 783 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 SHTN1A0MZ66 631 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 ZNF233A6NK53 670 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 H0YHG0 523 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 PPP1R12AO14974 1030 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 BUB1O43683 1085 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 PDE8BO95263 885 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 GLI1P08151 1106 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 MCM3P25205 808 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 MAP2K2P36507 400 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 STAT6P42226 847 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 CDKN1CP49918 316 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 CTSWP56202 376 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 SIK1P57059 783 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 KRT83P78385 493 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 CKAP4Q07065 602 aaKnown RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 ACTN3Q08043 901 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 TBC1D8BQ0IIM8 1120 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 SF3A3Q12874 501 aaKnown RBP eCLIP2.82□□□□□ -1.969e-11■□□□□ 9.8
PRPF39-207ENST00000554439 TRIM14Q14142 442 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 SEC23AQ15436 765 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 ALX1Q15699 326 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 MEA1Q16626 185 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 MTERF2Q49AM1 385 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 EFHC2Q5JST6 749 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 HFE2Q6ZVN8 426 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 JAMLQ86YT9 394 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 TEX2Q8IWB9 1127 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 CNPY4Q8N129 248 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 ADSSL1Q8N142 457 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 SRBD1Q8N5C6 995 aaKnown RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 ZBTB38Q8NAP3 1195 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 PRPF38AQ8NAV1 312 aaKnown RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 ANKRD20A12PQ8NF67 263 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 IFT81Q8WYA0 676 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 BHMTQ93088 406 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 FERMT2Q96AC1 680 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 CCDC43Q96MW1 224 aaKnown RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 CEP89Q96ST8 783 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 OSBPL9Q96SU4 736 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 TUBGCP2Q9BSJ2 902 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 IER2Q9BTL4 223 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 KRT23Q9C075 422 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 CLEC4MQ9H2X3 399 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 CENPHQ9H3R5 247 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 CNNM2Q9H8M5 875 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 FAM207AQ9NSI2 230 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 TYW1Q9NV66 732 aaKnown RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 NFU1Q9UMS0 254 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 PACSIN2Q9UNF0 486 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 THRAP3Q9Y2W1 955 aaKnown RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 CD2APQ9Y5K6 639 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 NID2Q14112 1375 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 PDS5AQ29RF7 1337 aaKnown RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 FAM205AQ6ZU69 1335 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 CCDC196A0A1B0GTZ2 297 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 ANKRD18BA2A2Z9 1011 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 MEIS3P2A8K0S8 358 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 GOLGA8KD6RF30 607 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 H7C1D1 291 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 KCNQ2O43526 872 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 KLRC4O43908 158 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 GRIN3BO60391 1043 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 HSF2BPO75031 334 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 SRGNP10124 158 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 ACRP10323 421 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 FCER1AP12319 257 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 CD33P20138 364 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 SCP2P22307 547 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 HPDP32754 393 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 LSP1P33241 339 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 CYLC1P35663 651 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 NAP1L1P55209 391 aaKnown RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 NLRP5P59047 1200 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 GPLD1P80108 840 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 RPL6Q02878 288 aaKnown RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 SPAG1Q07617 926 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 KIF5AQ12840 1032 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 IFT88Q13099 833 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 DBN1Q16643 649 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 FAM47AQ5JRC9 791 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 MIIPQ5JXC2 388 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 IFIT1BQ5T764 474 aaKnown RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 CCDC181Q5TID7 509 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 NAA35Q5VZE5 725 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms