RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 TMEM143Q96AN5 459 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 ZNF668Q96K58 619 aaPredicted RBP8.39□□□□□ -1.07
LINC00640-201ENST00000554409 FDXACB1Q9BRP7 624 aaPredicted RBP8.39□□□□□ -1.07
LINC00640-201ENST00000554409 LMAN2LQ9H0V9 348 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 ATP6V0A4Q9HBG4 840 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 XPNPEP1Q9NQW7 623 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 PRDM6Q9NQX0 595 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.39□□□□□ -1.07
LINC00640-201ENST00000554409 DACT1Q9NYF0 836 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 DBR1Q9UK59 544 aaKnown RBP8.39□□□□□ -1.07
LINC00640-201ENST00000554409 SMC3Q9UQE7 1217 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 PCDHB6Q9Y5E3 794 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 MRPL42Q9Y6G3 142 aaKnown RBP8.39□□□□□ -1.07
LINC00640-201ENST00000554409 MED24O75448 989 aa8.38□□□□□ -1.07
LINC00640-201ENST00000554409 EOMESO95936 686 aa8.38□□□□□ -1.07
LINC00640-201ENST00000554409 FGFR4P22455 802 aa8.38□□□□□ -1.07
LINC00640-201ENST00000554409 ARL2P36404 184 aa8.38□□□□□ -1.07
LINC00640-201ENST00000554409 PRPHP41219 470 aa8.38□□□□□ -1.07
LINC00640-201ENST00000554409 GATMP50440 423 aa8.38□□□□□ -1.07
LINC00640-201ENST00000554409 LAMTOR4Q0VGL1 99 aa8.38□□□□□ -1.07
LINC00640-201ENST00000554409 NBR1Q14596 966 aa8.38□□□□□ -1.07
LINC00640-201ENST00000554409 PCBP1Q15365 356 aaKnown RBP eCLIP8.38□□□□□ -1.07
LINC00640-201ENST00000554409 TIGD5Q53EQ6 642 aa8.38□□□□□ -1.07
LINC00640-201ENST00000554409 TJAP1Q5JTD0 557 aa8.38□□□□□ -1.07
LINC00640-201ENST00000554409 HAUS3Q68CZ6 603 aa8.38□□□□□ -1.07
LINC00640-201ENST00000554409 ZNF598Q86UK7 904 aaKnown RBP8.38□□□□□ -1.07
LINC00640-201ENST00000554409 ECHDC2Q86YB7 292 aa8.38□□□□□ -1.07
LINC00640-201ENST00000554409 KSR1Q8IVT5 923 aa8.38□□□□□ -1.07
LINC00640-201ENST00000554409 IGSF22Q8N9C0 903 aa8.38□□□□□ -1.07
LINC00640-201ENST00000554409 PRPF31Q8WWY3 499 aaKnown RBP8.38□□□□□ -1.07
LINC00640-201ENST00000554409 NLRP4Q96MN2 994 aa8.38□□□□□ -1.07
LINC00640-201ENST00000554409 CCDC43Q96MW1 224 aaKnown RBP8.38□□□□□ -1.07
LINC00640-201ENST00000554409 NACC1Q96RE7 527 aa8.38□□□□□ -1.07
LINC00640-201ENST00000554409 NFKBIZQ9BYH8 718 aa8.38□□□□□ -1.07
LINC00640-201ENST00000554409 RAB34Q9BZG1 259 aa8.38□□□□□ -1.07
LINC00640-201ENST00000554409 TMEM117Q9H0C3 514 aa8.38□□□□□ -1.07
LINC00640-201ENST00000554409 RNF19AQ9NV58 838 aa8.38□□□□□ -1.07
LINC00640-201ENST00000554409 COG5Q9UP83 839 aa8.38□□□□□ -1.07
LINC00640-201ENST00000554409 TBKBP1A7MCY6 615 aa8.37□□□□□ -1.07
LINC00640-201ENST00000554409 H3BQV1 296 aa8.37□□□□□ -1.07
LINC00640-201ENST00000554409 ZNF623O75123 536 aa8.37□□□□□ -1.07
LINC00640-201ENST00000554409 CSDE1O75534 798 aaKnown RBP8.37□□□□□ -1.07
LINC00640-201ENST00000554409 FGFR1P11362 822 aa8.37□□□□□ -1.07
LINC00640-201ENST00000554409 SKIP12755 728 aa8.37□□□□□ -1.07
LINC00640-201ENST00000554409 ATF7P17544 494 aaPredicted RBP8.37□□□□□ -1.07
LINC00640-201ENST00000554409 PHKA2P46019 1235 aa8.37□□□□□ -1.07
LINC00640-201ENST00000554409 RAB27AP51159 221 aa8.37□□□□□ -1.07
LINC00640-201ENST00000554409 PTENP60484 403 aa8.37□□□□□ -1.07
LINC00640-201ENST00000554409 MRPS5P82675 430 aaKnown RBP8.37□□□□□ -1.07
LINC00640-201ENST00000554409 ATP2C1P98194 919 aaPredicted RBP8.37□□□□□ -1.07
LINC00640-201ENST00000554409 PTGDRQ13258 359 aa8.37□□□□□ -1.07
LINC00640-201ENST00000554409 TFDP1Q14186 410 aa8.37□□□□□ -1.07
LINC00640-201ENST00000554409 PAN2Q504Q3 1202 aaKnown RBP8.37□□□□□ -1.07
LINC00640-201ENST00000554409 FAM102BQ5T8I3 360 aa8.37□□□□□ -1.07
LINC00640-201ENST00000554409 MCTP1Q6DN14 999 aa8.37□□□□□ -1.07
LINC00640-201ENST00000554409 CATSPER4Q7RTX7 472 aa8.37□□□□□ -1.07
LINC00640-201ENST00000554409 LRRC43Q8N309 656 aa8.37□□□□□ -1.07
LINC00640-201ENST00000554409 RNF149Q8NC42 400 aa8.37□□□□□ -1.07
LINC00640-201ENST00000554409 MCPH1Q8NEM0 835 aa8.37□□□□□ -1.07
LINC00640-201ENST00000554409 PIGOQ8TEQ8 1089 aa8.37□□□□□ -1.07
LINC00640-201ENST00000554409 SYMPKQ92797 1274 aaKnown RBP8.37□□□□□ -1.07
LINC00640-201ENST00000554409 CASD1Q96PB1 797 aa8.37□□□□□ -1.07
LINC00640-201ENST00000554409 ASB2Q96Q27 587 aa8.37□□□□□ -1.07
LINC00640-201ENST00000554409 NSUN3Q9H649 340 aaKnown RBP8.37□□□□□ -1.07
LINC00640-201ENST00000554409 MINDY3Q9H8M7 445 aa8.37□□□□□ -1.07
LINC00640-201ENST00000554409 AGPAT5Q9NUQ2 364 aa8.37□□□□□ -1.07
LINC00640-201ENST00000554409 LRWD1Q9UFC0 647 aa8.37□□□□□ -1.07
LINC00640-201ENST00000554409 PLAGL2Q9UPG8 496 aa8.37□□□□□ -1.07
LINC00640-201ENST00000554409 PIN4Q9Y237 131 aaKnown RBP8.37□□□□□ -1.07
LINC00640-201ENST00000554409 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.36□□□□□ -1.07
LINC00640-201ENST00000554409 DLL1O00548 723 aa8.36□□□□□ -1.07
LINC00640-201ENST00000554409 DPYSL4O14531 572 aa8.36□□□□□ -1.07
LINC00640-201ENST00000554409 GRM6O15303 877 aa8.36□□□□□ -1.07
LINC00640-201ENST00000554409 USO1O60763 962 aaKnown RBP8.36□□□□□ -1.07
LINC00640-201ENST00000554409 ITGB1P05556 798 aa8.36□□□□□ -1.07
LINC00640-201ENST00000554409 SRGAP2CP0DJJ0 459 aa8.36□□□□□ -1.07
LINC00640-201ENST00000554409 LAG3P18627 525 aa8.36□□□□□ -1.07
LINC00640-201ENST00000554409 PDCP20941 246 aa8.36□□□□□ -1.07
LINC00640-201ENST00000554409 GLRA2P23416 452 aa8.36□□□□□ -1.07
LINC00640-201ENST00000554409 AXLP30530 894 aa8.36□□□□□ -1.07
LINC00640-201ENST00000554409 CCT6AP40227 531 aaKnown RBP8.36□□□□□ -1.07
LINC00640-201ENST00000554409 UBE3AQ05086 875 aa8.36□□□□□ -1.07
LINC00640-201ENST00000554409 CAPSQ13938 189 aa8.36□□□□□ -1.07
LINC00640-201ENST00000554409 COL19A1Q14993 1142 aa8.36□□□□□ -1.07
LINC00640-201ENST00000554409 SKIV2LQ15477 1246 aaKnown RBP8.36□□□□□ -1.07
LINC00640-201ENST00000554409 CSPP1Q1MSJ5 1256 aa8.36□□□□□ -1.07
LINC00640-201ENST00000554409 AAK1Q2M2I8 961 aa8.36□□□□□ -1.07
LINC00640-201ENST00000554409 CLLU1OSQ5K130 101 aa8.36□□□□□ -1.07
LINC00640-201ENST00000554409 LARP1BQ659C4 914 aaKnown RBP8.36□□□□□ -1.07
LINC00640-201ENST00000554409 ARL6IP4Q66PJ3 421 aaKnown RBP8.36□□□□□ -1.07
LINC00640-201ENST00000554409 TWF2Q6IBS0 349 aaKnown RBP8.36□□□□□ -1.07
LINC00640-201ENST00000554409 BRAPQ7Z569 592 aa8.36□□□□□ -1.07
LINC00640-201ENST00000554409 KCTD17Q8N5Z5 321 aa8.36□□□□□ -1.07
LINC00640-201ENST00000554409 KLHL23Q8NBE8 558 aa8.36□□□□□ -1.07
LINC00640-201ENST00000554409 COLGALT1Q8NBJ5 622 aa8.36□□□□□ -1.07
LINC00640-201ENST00000554409 ASAP3Q8TDY4 903 aa8.36□□□□□ -1.07
LINC00640-201ENST00000554409 HLA-CQ95604 372 aa8.36□□□□□ -1.07
LINC00640-201ENST00000554409 INTS4Q96HW7 963 aaKnown RBP8.36□□□□□ -1.07
LINC00640-201ENST00000554409 COL25A1Q9BXS0 654 aaPredicted RBP8.36□□□□□ -1.07
LINC00640-201ENST00000554409 MRPL9Q9BYD2 267 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms